| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787172
Identifier: 91787172
GI number: 91787172
Start: 1317440
End: 1317766
Strand: Reverse
Name: 91787172
Synonym: Bpro_1275
Alternate gene names: NA
Gene position: 1317766-1317440 (Counterclockwise)
Preceding gene: 91787173
Following gene: 91787171
Centisome position: 25.34
GC content: 61.77
Gene sequence:
>327_bases ATGGCTTTATATTTGACCCGCTTCAGCTACACGCCTGAAACCTGGGCTCGCTTGACGAAGAACCCGGAAGACCGACGTGA GGCTGCGCGCAAGTACATCGAGTCGGTTGGTGGAAAGCTGCATGGCTTCTGGTACGCGTTCGGCGCATACGACGGCTACA ACCTCTGGGAAGCGCCTGACAACGTCTCGATGGCAGCAGTTGCGATCGCGATCGGCGGGGGTGGCGCGTTGTCGAAATTC GAGACGACGCCCCTGCTCACGGTCGAGGAGACCCTGGACGCCCTTGGCCGTGCGCAAGGGGTCACCTATCGGCCACCCGG AGCGTAG
Upstream 100 bases:
>100_bases GTCTGCGTGATTGAAATGTTGATCCGTTACCCAGGAGTCGGGAACATAATATTTTCCCGCGAATTAAGAACGGCCCAATA CACCGAAAGGAGTTACTACC
Downstream 100 bases:
>100_bases TCGGGCGGACTCTGCCAGCGGCCTTGGCGCCGCCGGCCGTGCGACCGTCCATTGACCGATTCTGGTCGTCCGCGCGAGCA GGCTGAATGCCCGCTTCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MALYLTRFSYTPETWARLTKNPEDRREAARKYIESVGGKLHGFWYAFGAYDGYNLWEAPDNVSMAAVAIAIGGGGALSKF ETTPLLTVEETLDALGRAQGVTYRPPGA
Sequences:
>Translated_108_residues MALYLTRFSYTPETWARLTKNPEDRREAARKYIESVGGKLHGFWYAFGAYDGYNLWEAPDNVSMAAVAIAIGGGGALSKF ETTPLLTVEETLDALGRAQGVTYRPPGA >Mature_107_residues ALYLTRFSYTPETWARLTKNPEDRREAARKYIESVGGKLHGFWYAFGAYDGYNLWEAPDNVSMAAVAIAIGGGGALSKFE TTPLLTVEETLDALGRAQGVTYRPPGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11835; Mature: 11704
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALYLTRFSYTPETWARLTKNPEDRREAARKYIESVGGKLHGFWYAFGAYDGYNLWEAPD CEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCC NVSMAAVAIAIGGGGALSKFETTPLLTVEETLDALGRAQGVTYRPPGA CCCEEEEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ALYLTRFSYTPETWARLTKNPEDRREAARKYIESVGGKLHGFWYAFGAYDGYNLWEAPD EEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCC NVSMAAVAIAIGGGGALSKFETTPLLTVEETLDALGRAQGVTYRPPGA CCCEEEEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA