| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787171
Identifier: 91787171
GI number: 91787171
Start: 1317098
End: 1317388
Strand: Reverse
Name: 91787171
Synonym: Bpro_1274
Alternate gene names: NA
Gene position: 1317388-1317098 (Counterclockwise)
Preceding gene: 91787172
Following gene: 91787170
Centisome position: 25.33
GC content: 56.01
Gene sequence:
>291_bases TTGACCGATTCTGGTCGTCCGCGCGAGCAGGCTGAATGCCCGCTTCCAAGGTTGTTGCAGTCGCTCGGGCAGAGACGGAT GGTCGCTTGTAAAAGTCCAATGGCTGCAATACCCCAACCGGATTTGGAAACACCGGTTGTCAAGCGTTGCGAAATTGAAA TTGAATGGGCATTCATCAAGAGCCTCTACTGGTCCATCGCCTCACTTTATCGCGGGCACGGGCGACAGACCGGCAGGCTG TCATCGGACGGCAAACACCTGAGCCCGGTGTGCCTTCAGCGACTTGCATAA
Upstream 100 bases:
>100_bases CGCCCTTGGCCGTGCGCAAGGGGTCACCTATCGGCCACCCGGAGCGTAGTCGGGCGGACTCTGCCAGCGGCCTTGGCGCC GCCGGCCGTGCGACCGTCCA
Downstream 100 bases:
>100_bases ACGGGTGCATGGTTTAAAGTCTGAAAACACGTGCCAACCGGAGCGCCTTGATGACAAGCATCACCAACATCGCTGAATCT GCGGCCACCCAGCCGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MTDSGRPREQAECPLPRLLQSLGQRRMVACKSPMAAIPQPDLETPVVKRCEIEIEWAFIKSLYWSIASLYRGHGRQTGRL SSDGKHLSPVCLQRLA
Sequences:
>Translated_96_residues MTDSGRPREQAECPLPRLLQSLGQRRMVACKSPMAAIPQPDLETPVVKRCEIEIEWAFIKSLYWSIASLYRGHGRQTGRL SSDGKHLSPVCLQRLA >Mature_95_residues TDSGRPREQAECPLPRLLQSLGQRRMVACKSPMAAIPQPDLETPVVKRCEIEIEWAFIKSLYWSIASLYRGHGRQTGRLS SDGKHLSPVCLQRLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10819; Mature: 10688
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSGRPREQAECPLPRLLQSLGQRRMVACKSPMAAIPQPDLETPVVKRCEIEIEWAFIK CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SLYWSIASLYRGHGRQTGRLSSDGKHLSPVCLQRLA HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure TDSGRPREQAECPLPRLLQSLGQRRMVACKSPMAAIPQPDLETPVVKRCEIEIEWAFIK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SLYWSIASLYRGHGRQTGRLSSDGKHLSPVCLQRLA HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA