Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787163

Identifier: 91787163

GI number: 91787163

Start: 1308808

End: 1309407

Strand: Reverse

Name: 91787163

Synonym: Bpro_1266

Alternate gene names: NA

Gene position: 1309407-1308808 (Counterclockwise)

Preceding gene: 91787164

Following gene: 91787162

Centisome position: 25.18

GC content: 65.5

Gene sequence:

>600_bases
ATGGAAAATGAAGTCAAACTGGCCGCTGGCGCGATGGTCGCACTCGCCATCGCCACCGCAGCGCTGGTCGTGATGCCCTA
CATCCAGGTACGCGATGTCAAACCACCGGCGGGCCTCAAGCCTTATACCGACCAGCAGCTGCGCGGGCGAGAGGTGTACA
TCGCCAACGGCTGCGTGTATTGCCACAGCCAGCAGCCGCGCGACCGCAATCTGGCGCCCGACCACACGCGCGGCTGGGGC
CGCCCTTCGGTGCCGGCCGATTATGTGTACGACAAACCGCACCTGCTGGGCAGCATGCGCACCGGGCCGGACCTCTTCAA
CATCGGCGCGCGCCAGCCCAGCAAGGACTGGCATCTGGGCCACCTGTACCAGCCGCGTGCCTATGTGCCCGACTCCATCA
TGCCGTCGTATCCCTACATGTTTCTGGTCAAGGACGCGGCTGAAGAAGGCGACCAGGTGGTGACGCTGCCGCCGGTCTAC
GCGCCTTTTGGCAAGGTCGTGGTGGCCCGGCCGGAGGCACTGGATCTGGTCAAGTACCTGCAGGCGCTGAACCACACCTA
CCCCATCCTGCCGGCACCGGCCGTACCGGCAGCGCCTTGA

Upstream 100 bases:

>100_bases
GGGCATCTGGTGTTTGTGGGCCACTTCCTGGCGATGGCGCTGCGTTTCGGCCCTGACCGAACCGGTGCGGCATTGTTCAT
GCAACCCCGGGAGGCCGCGC

Downstream 100 bases:

>100_bases
TGCACCCGAGGAGATTTTCATGGTGACCCCTGACCCACGGCAGCACCCGGCGGCGCAGCAACGCGAAACGGGAGACCCCT
CCGAGCAGGTGCAGCCCATG

Product: cytochrome C oxidase, mono-heme subunit/FixO

Products: NA

Alternate protein names: Cbb3-Type Cytochrome C Oxidase Subunit II; Cytochrome C Oxidase Mono-Heme Subunit/FixO; Cytochrome C Oxidase Cbb3-Type Subunit I; Cbb3-Type Cytochrome Oxidase Cytochrome C Subunit; Cb-Type Cytochrome C Oxidase Subunit II; Bifunctional Cbb3-Type Cytochrome C Oxidase Subunit I/II; Cytochrome C Oxidase; Cytochrome C Oxidase Subunit CcoO; Cytochrome Oxidase Subunit; Cytochrome C Oxidase Subunit; Cytochrome-C Oxidase FixO Chain; Cytochrome C Oxidase Mono-Heme Subunit/FixO Superfamily; Cytochrome C Oxidase Mono-Heme Subunit/Fixo; Cytochrome-C Oxidase Subunit II; Bifunctional Cytochrome C Oxidase Subunit SccoN/O; Cytochrome-Cbb3 Oxidase Subunit I; Transmembrane Cytochrome C Oxidase FixO Protein; Cbb3-Type Cytochrome Oxidase; Cbb3-Type Cytochrome C Oxidase Subunit CcoO; Cbb3-Type Cytochrome C Oxidase Subunit I + II; Cytochrome Oxidase; Cytochrome C Oxidase Mono-Heme Subunit; Cytochrome C Oxidase Cbb3-Type; Cytochrome C Oxidase Cbb3-Type Mono-Heme Subunit II; Cytochrome Cbb3 Oxidase Subunit I/III; Cytochrome Oxidase Cytochrome C Subunit; Cytochrome C Oxidase Subunit CcoN; Cytochrome C Oxidase Family Protein; Cytochrome C Oxidase Cbb3-Type Subunit I/Mono-Heme Subunit; Cytochrome C Oxidase FixO Chain; Cytochrome-Cbb3 Oxidase Subunit II; Cytochrome C Family Protein; Cytochrome C Oxidase CcoO Subunit; Cbb3-Type Cytochrome C Oxidase Subunits CcoN/CcoO; Cytochrome C Oxidase Cbb3-Type Subunit I And II

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MENEVKLAAGAMVALAIATAALVVMPYIQVRDVKPPAGLKPYTDQQLRGREVYIANGCVYCHSQQPRDRNLAPDHTRGWG
RPSVPADYVYDKPHLLGSMRTGPDLFNIGARQPSKDWHLGHLYQPRAYVPDSIMPSYPYMFLVKDAAEEGDQVVTLPPVY
APFGKVVVARPEALDLVKYLQALNHTYPILPAPAVPAAP

Sequences:

>Translated_199_residues
MENEVKLAAGAMVALAIATAALVVMPYIQVRDVKPPAGLKPYTDQQLRGREVYIANGCVYCHSQQPRDRNLAPDHTRGWG
RPSVPADYVYDKPHLLGSMRTGPDLFNIGARQPSKDWHLGHLYQPRAYVPDSIMPSYPYMFLVKDAAEEGDQVVTLPPVY
APFGKVVVARPEALDLVKYLQALNHTYPILPAPAVPAAP
>Mature_199_residues
MENEVKLAAGAMVALAIATAALVVMPYIQVRDVKPPAGLKPYTDQQLRGREVYIANGCVYCHSQQPRDRNLAPDHTRGWG
RPSVPADYVYDKPHLLGSMRTGPDLFNIGARQPSKDWHLGHLYQPRAYVPDSIMPSYPYMFLVKDAAEEGDQVVTLPPVY
APFGKVVVARPEALDLVKYLQALNHTYPILPAPAVPAAP

Specific function: Unknown

COG id: COG2993

COG function: function code C; Cbb3-type cytochrome oxidase, cytochrome c subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21942; Mature: 21942

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENEVKLAAGAMVALAIATAALVVMPYIQVRDVKPPAGLKPYTDQQLRGREVYIANGCVY
CCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCEEE
CHSQQPRDRNLAPDHTRGWGRPSVPADYVYDKPHLLGSMRTGPDLFNIGARQPSKDWHLG
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCC
HLYQPRAYVPDSIMPSYPYMFLVKDAAEEGDQVVTLPPVYAPFGKVVVARPEALDLVKYL
EEECCCCCCCCCCCCCCCEEEEEECCHHCCCEEEEECCCCCCCCCEEEECCHHHHHHHHH
QALNHTYPILPAPAVPAAP
HHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MENEVKLAAGAMVALAIATAALVVMPYIQVRDVKPPAGLKPYTDQQLRGREVYIANGCVY
CCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCEEE
CHSQQPRDRNLAPDHTRGWGRPSVPADYVYDKPHLLGSMRTGPDLFNIGARQPSKDWHLG
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCC
HLYQPRAYVPDSIMPSYPYMFLVKDAAEEGDQVVTLPPVYAPFGKVVVARPEALDLVKYL
EEECCCCCCCCCCCCCCCEEEEEECCHHCCCEEEEECCCCCCCCCEEEECCHHHHHHHHH
QALNHTYPILPAPAVPAAP
HHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA