Click here to switch to the map view.

The map label for this gene is cycA [H]

Identifier: 91787162

GI number: 91787162

Start: 1308171

End: 1308788

Strand: Reverse

Name: cycA [H]

Synonym: Bpro_1265

Alternate gene names: 91787162

Gene position: 1308788-1308171 (Counterclockwise)

Preceding gene: 91787163

Following gene: 91787161

Centisome position: 25.17

GC content: 67.15

Gene sequence:

>618_bases
ATGGTGACCCCTGACCCACGGCAGCACCCGGCGGCGCAGCAACGCGAAACGGGAGACCCCTCCGAGCAGGTGCAGCCCAT
GCCCCTGCTGGCAGCTGCGATCACGCTGGTGATCGTGCTTCTGGGTGCCGGGTATATATTTTTCTCCGACCCGTTTGGCA
ATGCCGAGCTGGGTGACCGGCGCACCGTGGCCGACCTCACGGCCAAGGCGCCGGGCGCACCGGGCGCCGCCGGCCAGGCG
GTAGACGGCAAGGCGCTTTACACGGGCAACTGCGCGTCCTGCCACCAGGCCACCGGCAAGGGCCTGCCCGGCGTGTTTCC
GCCGCTGGACGGCTCTGAATGGGTGCAGGGAGAGCCGCGCGTGGTGGTTAACATCCTGCTGCACGGCATCACCGGCGAGA
TCGAGGTGGCCGGCAGCACCTACAAGGGCATGATGCCTTCGTTCAAGCAGTTGGGCGATGCCGAGCTGGCCGCCATTGCC
AGCACCATTCGATCGGAATGGTCGAACAAGGCTGCAGCCATCACGCCAGAGCAATTCGCCGCCGAACGCAAGGACACGCG
CCGCAGTGCGCCCTTTGCCAGCGGCGCTGAACTCAAGGCCTTGCCGGCGGCGCAATGA

Upstream 100 bases:

>100_bases
CTGGATCTGGTCAAGTACCTGCAGGCGCTGAACCACACCTACCCCATCCTGCCGGCACCGGCCGTACCGGCAGCGCCTTG
ATGCACCCGAGGAGATTTTC

Downstream 100 bases:

>100_bases
TGGGACGGACGACCGCATTGAGCGTGCTCTTCGCACTGCTCGCCTATGCGGCAGGCGCCTGGCTCACGCATGATTTTCAG
ATCTGGACGGCCGAAGGCGC

Product: class I cytochrome c

Products: NA

Alternate protein names: Cytochrome c552 [H]

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MVTPDPRQHPAAQQRETGDPSEQVQPMPLLAAAITLVIVLLGAGYIFFSDPFGNAELGDRRTVADLTAKAPGAPGAAGQA
VDGKALYTGNCASCHQATGKGLPGVFPPLDGSEWVQGEPRVVVNILLHGITGEIEVAGSTYKGMMPSFKQLGDAELAAIA
STIRSEWSNKAAAITPEQFAAERKDTRRSAPFASGAELKALPAAQ

Sequences:

>Translated_205_residues
MVTPDPRQHPAAQQRETGDPSEQVQPMPLLAAAITLVIVLLGAGYIFFSDPFGNAELGDRRTVADLTAKAPGAPGAAGQA
VDGKALYTGNCASCHQATGKGLPGVFPPLDGSEWVQGEPRVVVNILLHGITGEIEVAGSTYKGMMPSFKQLGDAELAAIA
STIRSEWSNKAAAITPEQFAAERKDTRRSAPFASGAELKALPAAQ
>Mature_205_residues
MVTPDPRQHPAAQQRETGDPSEQVQPMPLLAAAITLVIVLLGAGYIFFSDPFGNAELGDRRTVADLTAKAPGAPGAAGQA
VDGKALYTGNCASCHQATGKGLPGVFPPLDGSEWVQGEPRVVVNILLHGITGEIEVAGSTYKGMMPSFKQLGDAELAAIA
STIRSEWSNKAAAITPEQFAAERKDTRRSAPFASGAELKALPAAQ

Specific function: This monoheme basic protein appears to function as an electron donor to cytochrome oxidase in T.thermophilus [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 21319; Mature: 21319

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTPDPRQHPAAQQRETGDPSEQVQPMPLLAAAITLVIVLLGAGYIFFSDPFGNAELGDR
CCCCCCCCCCCCHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC
RTVADLTAKAPGAPGAAGQAVDGKALYTGNCASCHQATGKGLPGVFPPLDGSEWVQGEPR
HHHHHHHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
VVVNILLHGITGEIEVAGSTYKGMMPSFKQLGDAELAAIASTIRSEWSNKAAAITPEQFA
EEEEHHHHCCCCEEEECCCCHHCCCHHHHHHCCHHHHHHHHHHHHHHCCCCEEECHHHHH
AERKDTRRSAPFASGAELKALPAAQ
HHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVTPDPRQHPAAQQRETGDPSEQVQPMPLLAAAITLVIVLLGAGYIFFSDPFGNAELGDR
CCCCCCCCCCCCHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC
RTVADLTAKAPGAPGAAGQAVDGKALYTGNCASCHQATGKGLPGVFPPLDGSEWVQGEPR
HHHHHHHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
VVVNILLHGITGEIEVAGSTYKGMMPSFKQLGDAELAAIASTIRSEWSNKAAAITPEQFA
EEEEHHHHCCCCEEEECCCCHHCCCHHHHHHCCHHHHHHHHHHHHHHCCCCEEECHHHHH
AERKDTRRSAPFASGAELKALPAAQ
HHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2986626; 11152119 [H]