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The map label for this gene is comF [H]

Identifier: 91787139

GI number: 91787139

Start: 1287676

End: 1288491

Strand: Reverse

Name: comF [H]

Synonym: Bpro_1242

Alternate gene names: 91787139

Gene position: 1288491-1287676 (Counterclockwise)

Preceding gene: 91787147

Following gene: 91787138

Centisome position: 24.78

GC content: 69.0

Gene sequence:

>816_bases
GTGCGCAGAAAGGTACGCGAGTATATTGACACGGTGTCTGCACGCTCGCCCTCCTCCCGTTTATTTACCCGTTTTTTCCA
GCCTTTGTCGCTGCCGCGGCTACCTGGCCTGGTCAGCCAGTGCGCAGTCTGCCGCAGTTGGCCGGCGCGCCAGGTGTGCC
AGCCCTGCCAGGCGCGTTTTGCGCCGGTGCAGCATCGCTGCGCCGGCTGCGCGCTGACCCTGCCGGCCGACCTGTCCATG
GGTTTGAGAAGCGGTCCCCGCGCGTGTGGCAGTTGCGTACGCCAGCGGCCGCCGCTGGATGGGGCGCTGGCGGCGGTGCC
GTATGCCTACCCCTGGTCGACGCTGATTGCCGGCTACAAATTTGGCGCGCAGCCCGGCTGGGCCGCTTTCTTTGCGGACA
TGCTGCTGCAGACGCCCGGCGTGCTGCAGGTACTGGAGGACCTGCAGGCCAGCGACTGGATTGTGCCGGTGCCGCTGTCG
TCAGCACGGCTGCAAAAGCGGGGATTCAACCAGGCCTGGGAACTGGCCAGCGCGCTGGCCCGGCAGTCGCGGACCACAGG
CCGGGCCGATGCGCGCCTGCTGCTGCGCGTCAGGGACACGCGCCCGCAAAGCGAGCTCAAGCGCGAGGCCCGGCTGGCGA
ATGTCGAGGGAGCCTTTCTGGTCGATCCGCTGCGCGTGGGCGAGCTGGAAGGCCGGCGCGTGCTGCTGGTCGATGACGTG
ATGACCAGCGGTGCCTCGCTGTTCACCGCCGCCCGGGCCCTGCGCGAAGCCGGTGCTGCCCACATCACGGCGGTGGTGCT
GGCGCGCACGGAGTAA

Upstream 100 bases:

>100_bases
ACGGCGAGGCCAGCGGCGCCGTGCGCTGCCAGCGGCTGACGGCAAGCGGATCGAGTGTGGGCGGACGCTGGGTGGTGGTC
ATGGGCAGGAGGTCAATGCG

Downstream 100 bases:

>100_bases
TGGCCCCCACGTTCGCTCACTGCGTGTCGTACCCGGCTAGCAACGACAATTCAGCCATGTTCAATATTGTTCTCGTCGAG
CCTGAAATTCCGCCCAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: DNA transformation protein ComF; Protein COM101A [H]

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MRRKVREYIDTVSARSPSSRLFTRFFQPLSLPRLPGLVSQCAVCRSWPARQVCQPCQARFAPVQHRCAGCALTLPADLSM
GLRSGPRACGSCVRQRPPLDGALAAVPYAYPWSTLIAGYKFGAQPGWAAFFADMLLQTPGVLQVLEDLQASDWIVPVPLS
SARLQKRGFNQAWELASALARQSRTTGRADARLLLRVRDTRPQSELKREARLANVEGAFLVDPLRVGELEGRRVLLVDDV
MTSGASLFTAARALREAGAAHITAVVLARTE

Sequences:

>Translated_271_residues
MRRKVREYIDTVSARSPSSRLFTRFFQPLSLPRLPGLVSQCAVCRSWPARQVCQPCQARFAPVQHRCAGCALTLPADLSM
GLRSGPRACGSCVRQRPPLDGALAAVPYAYPWSTLIAGYKFGAQPGWAAFFADMLLQTPGVLQVLEDLQASDWIVPVPLS
SARLQKRGFNQAWELASALARQSRTTGRADARLLLRVRDTRPQSELKREARLANVEGAFLVDPLRVGELEGRRVLLVDDV
MTSGASLFTAARALREAGAAHITAVVLARTE
>Mature_271_residues
MRRKVREYIDTVSARSPSSRLFTRFFQPLSLPRLPGLVSQCAVCRSWPARQVCQPCQARFAPVQHRCAGCALTLPADLSM
GLRSGPRACGSCVRQRPPLDGALAAVPYAYPWSTLIAGYKFGAQPGWAAFFADMLLQTPGVLQVLEDLQASDWIVPVPLS
SARLQKRGFNQAWELASALARQSRTTGRADARLLLRVRDTRPQSELKREARLANVEGAFLVDPLRVGELEGRRVLLVDDV
MTSGASLFTAARALREAGAAHITAVVLARTE

Specific function: Involved in transformation (competence for DNA uptake) [H]

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family [H]

Homologues:

Organism=Escherichia coli, GI87082263, Length=182, Percent_Identity=32.4175824175824, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005222
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 29682; Mature: 29682

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: PS00103 PUR_PYR_PR_TRANSFER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRKVREYIDTVSARSPSSRLFTRFFQPLSLPRLPGLVSQCAVCRSWPARQVCQPCQARF
CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHC
APVQHRCAGCALTLPADLSMGLRSGPRACGSCVRQRPPLDGALAAVPYAYPWSTLIAGYK
CCHHHHHCCCEEECCCHHHHCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHH
FGAQPGWAAFFADMLLQTPGVLQVLEDLQASDWIVPVPLSSARLQKRGFNQAWELASALA
CCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCHHHHHHCCCHHHHHHHHHHH
RQSRTTGRADARLLLRVRDTRPQSELKREARLANVEGAFLVDPLRVGELEGRRVLLVDDV
HHHCCCCCCCHHEEEEECCCCCHHHHHHHHHHHCCCCCEEECCHHCCCCCCCEEEEEHHH
MTSGASLFTAARALREAGAAHITAVVLARTE
HHCCHHHHHHHHHHHHCCHHHEEEEEEEECC
>Mature Secondary Structure
MRRKVREYIDTVSARSPSSRLFTRFFQPLSLPRLPGLVSQCAVCRSWPARQVCQPCQARF
CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHC
APVQHRCAGCALTLPADLSMGLRSGPRACGSCVRQRPPLDGALAAVPYAYPWSTLIAGYK
CCHHHHHCCCEEECCCHHHHCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHH
FGAQPGWAAFFADMLLQTPGVLQVLEDLQASDWIVPVPLSSARLQKRGFNQAWELASALA
CCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCHHHHHHCCCHHHHHHHHHHH
RQSRTTGRADARLLLRVRDTRPQSELKREARLANVEGAFLVDPLRVGELEGRRVLLVDDV
HHHCCCCCCCHHEEEEECCCCCHHHHHHHHHHHCCCCCEEECCHHCCCCCCCEEEEEHHH
MTSGASLFTAARALREAGAAHITAVVLARTE
HHCCHHHHHHHHHHHHCCHHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 1856167; 7542800 [H]