| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is prs [H]
Identifier: 91787090
GI number: 91787090
Start: 1233895
End: 1234800
Strand: Reverse
Name: prs [H]
Synonym: Bpro_1193
Alternate gene names: 91787090
Gene position: 1234800-1233895 (Counterclockwise)
Preceding gene: 91787091
Following gene: 91787089
Centisome position: 23.74
GC content: 69.43
Gene sequence:
>906_bases ATGCTGATCGTTGCCCTTCCAGGTGAGGCCCGGCTCGCGGGCAGGCTGGCGCGCCTGCTGCGCTGCGGCTGGAGCGAGCT GCGGCTGCACCGTTTTCCCGACGGGGAAACCCTGGTGCGCATTGACGCGCCGGTGATGGGCCGCTGCGTCGTGCTGGCCG GCAGCCTGAACCAGCCCGACGGCAAGACCCTGCCCCTGCTGTTTGCCGCCGACGCGGCACGCGAGCTGGGCGCCTCGCGG GTCGGCCTGGTGGCGCCCTACCTGGCCTACATGCGGCAGGACCACCGCTTTAACGCTGGCGAGGCGGTCACTTCGCGCAG CTATGCACGGCTGCTCTCGGCATCACTTGACTTCCTCGTCACGGTCGACCCGCACCTGCATCGCTGGCGCAATCTGGGCG ATATCTATCCGATCCGCACGCAGGCGGTCGCGGCAGCCCCCATGATCGCGCGCTGGCTGCGCAGCCATGTCGACCATCCG CTGGTGATCGGACCTGACCAGGAAAGCGGGCAATGGGTTGCCGAGGTGGCCCGGCTGACGGATGCCCCCTGGACGGTGCT GGGCAAGACCCGCCTGGGCGACCGCGATGTGCAGGTCACGCTGGCCGATGGCGGCCCCTGGCCCGGCAAGACGCCGGTGC TGCTGGACGACATCATCTCCACCGGCCAGACCCTGGTCGCCGCTGCCACGGCGCTGACGCAGGCCGGCATGGCCGCACCC CTGTGCATTGGCGTGCATGCCCTGTTTGACAGCGGCGCACTGCAACGGCTGCAGGACGCGGGCGTGACACGCGTGGTGAC CTGCGATACGATTTCCCACACCTCCAATGCCATCCGCCTGGCGCCGCTGCTGGCCAGGGCCGTGCTCGCCGTCTCACACC ACAGTACACAGGGCAAGCCACCATGA
Upstream 100 bases:
>100_bases CGCTGTTCACGCTGCACGCAGCCACGCCGGGTGAGCTGGCCTATGCATTGGAATACGCGGCCTCGCAGGCTGAGACCGTG CATGTGCTGGAGGATGCCTG
Downstream 100 bases:
>100_bases CGTCCAAACAGGTCCTGCTGATCCAGGGTCACCCCGACACGTCCGCTCACCACCTGTGCCATGCCCTGGCCGCGGCCTAC GCCAGCGGCGCGCAAGAGGG
Product: phosphoribosylpyrophosphate synthetase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MLIVALPGEARLAGRLARLLRCGWSELRLHRFPDGETLVRIDAPVMGRCVVLAGSLNQPDGKTLPLLFAADAARELGASR VGLVAPYLAYMRQDHRFNAGEAVTSRSYARLLSASLDFLVTVDPHLHRWRNLGDIYPIRTQAVAAAPMIARWLRSHVDHP LVIGPDQESGQWVAEVARLTDAPWTVLGKTRLGDRDVQVTLADGGPWPGKTPVLLDDIISTGQTLVAAATALTQAGMAAP LCIGVHALFDSGALQRLQDAGVTRVVTCDTISHTSNAIRLAPLLARAVLAVSHHSTQGKPP
Sequences:
>Translated_301_residues MLIVALPGEARLAGRLARLLRCGWSELRLHRFPDGETLVRIDAPVMGRCVVLAGSLNQPDGKTLPLLFAADAARELGASR VGLVAPYLAYMRQDHRFNAGEAVTSRSYARLLSASLDFLVTVDPHLHRWRNLGDIYPIRTQAVAAAPMIARWLRSHVDHP LVIGPDQESGQWVAEVARLTDAPWTVLGKTRLGDRDVQVTLADGGPWPGKTPVLLDDIISTGQTLVAAATALTQAGMAAP LCIGVHALFDSGALQRLQDAGVTRVVTCDTISHTSNAIRLAPLLARAVLAVSHHSTQGKPP >Mature_301_residues MLIVALPGEARLAGRLARLLRCGWSELRLHRFPDGETLVRIDAPVMGRCVVLAGSLNQPDGKTLPLLFAADAARELGASR VGLVAPYLAYMRQDHRFNAGEAVTSRSYARLLSASLDFLVTVDPHLHRWRNLGDIYPIRTQAVAAAPMIARWLRSHVDHP LVIGPDQESGQWVAEVARLTDAPWTVLGKTRLGDRDVQVTLADGGPWPGKTPVLLDDIISTGQTLVAAATALTQAGMAAP LCIGVHALFDSGALQRLQDAGVTRVVTCDTISHTSNAIRLAPLLARAVLAVSHHSTQGKPP
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI28557709, Length=290, Percent_Identity=25.8620689655172, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI84875539, Length=279, Percent_Identity=25.8064516129032, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI4506129, Length=276, Percent_Identity=25.3623188405797, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI4506127, Length=290, Percent_Identity=25.5172413793103, Blast_Score=86, Evalue=3e-17, Organism=Escherichia coli, GI1787458, Length=299, Percent_Identity=29.0969899665552, Blast_Score=107, Evalue=8e-25, Organism=Caenorhabditis elegans, GI25149168, Length=294, Percent_Identity=26.530612244898, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17554702, Length=294, Percent_Identity=26.530612244898, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17554704, Length=294, Percent_Identity=26.530612244898, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71989924, Length=294, Percent_Identity=26.530612244898, Blast_Score=92, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6321776, Length=279, Percent_Identity=23.6559139784946, Blast_Score=79, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6320946, Length=293, Percent_Identity=23.2081911262799, Blast_Score=79, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6319403, Length=289, Percent_Identity=22.8373702422145, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI21355239, Length=265, Percent_Identity=26.4150943396226, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI45551540, Length=288, Percent_Identity=24.6527777777778, Blast_Score=82, Evalue=6e-16,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 32312; Mature: 32312
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIVALPGEARLAGRLARLLRCGWSELRLHRFPDGETLVRIDAPVMGRCVVLAGSLNQPD CEEEECCCCHHHHHHHHHHHHCCHHHHEEEECCCCCEEEEECCCCCCEEEEEECCCCCCC GKTLPLLFAADAARELGASRVGLVAPYLAYMRQDHRFNAGEAVTSRSYARLLSASLDFLV CCEEEEEEECHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEE TVDPHLHRWRNLGDIYPIRTQAVAAAPMIARWLRSHVDHPLVIGPDQESGQWVAEVARLT EECHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHC DAPWTVLGKTRLGDRDVQVTLADGGPWPGKTPVLLDDIISTGQTLVAAATALTQAGMAAP CCCEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCH LCIGVHALFDSGALQRLQDAGVTRVVTCDTISHTSNAIRLAPLLARAVLAVSHHSTQGKP HHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC P C >Mature Secondary Structure MLIVALPGEARLAGRLARLLRCGWSELRLHRFPDGETLVRIDAPVMGRCVVLAGSLNQPD CEEEECCCCHHHHHHHHHHHHCCHHHHEEEECCCCCEEEEECCCCCCEEEEEECCCCCCC GKTLPLLFAADAARELGASRVGLVAPYLAYMRQDHRFNAGEAVTSRSYARLLSASLDFLV CCEEEEEEECHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEE TVDPHLHRWRNLGDIYPIRTQAVAAAPMIARWLRSHVDHPLVIGPDQESGQWVAEVARLT EECHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHC DAPWTVLGKTRLGDRDVQVTLADGGPWPGKTPVLLDDIISTGQTLVAAATALTQAGMAAP CCCEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCH LCIGVHALFDSGALQRLQDAGVTRVVTCDTISHTSNAIRLAPLLARAVLAVSHHSTQGKP HHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]