| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is hutU [H]
Identifier: 91787061
GI number: 91787061
Start: 1206144
End: 1207862
Strand: Reverse
Name: hutU [H]
Synonym: Bpro_1164
Alternate gene names: 91787061
Gene position: 1207862-1206144 (Counterclockwise)
Preceding gene: 91787079
Following gene: 91787060
Centisome position: 23.23
GC content: 66.38
Gene sequence:
>1719_bases ATGTCGGATCTCATGCCGGATCTTTCCAACACCCCCTTCCAGGACAGCCAGGCCCGACCGGTCCGCGCGCCCCGGGGAAG CGCCCTCACCTGCGCCAACTGGCAGATCGAAGCGGCTTACCGCATGATCCAGAACAACCTGGACCCGGAAGTCGCGGAAA ACCCCGACGAGCTGGTGGTGTACGGCGGCATTGGCAAGGCGGCGCGCAACTGGCCGGCGTTTGACGCCATCCTGGACTCG CTGCGCAAGCTCAAGGCCGACGAGACACTGCTGGTGCAGTCCGGCAAGCCGGTCGGCGTGTTCCGCACCCATGCGGGCGC GCCGCGCGTGCTGATCGCCAATTCCAACCTGGTGCCCAAATGGGCCACCTGGGAACACTTCAATGAACTCGACCGCGCCG GCCTCATGATGTACGGCCAGATGACGGCCGGCAGCTGGATCTACATCGGCACGCAGGGCATCGTGCAGGGCACGTACGAG ACCTTTGTGGAAGCGGGCCGCCAGCACTTCAATGGCGACCTGGCGGGCCGCTGGGTGCTGACGGCGGGGTTGGGGGGCAT GGGTGGCGCGCAGCCGCTGGCGGCGACCTTTGCCGGCGCCTGCTCCCTCAACATCGAATGCCAGCAGTCGCGCATCGACT TTCGCTTGAGGACGCGCTACGTCGACAAGCAAGCCGCCAGCCTCGACGAAGCGCTGGAGATGATCCAGCACCACACGTCG CGCAAGGAGGCCGTCTCCATCGCGCTGTGCGGCAATGCGGCCGAGATCGTGCCGGAACTGGTCAGGCGCGCGCAGGCCGG CGGCATCCGCCCCGACATCGTGACCGACCAGACCTCGGCCCACGACATCATCAATGGCTACCTGCCGGCGGGCTGGACGG TGGCCCGATGGCAGGCCGCGCAAAAGGACCCGGCGCAGCATGCCGCGCTGACAAAAGCGGCCGGCGAGTCCTGCGCGGTG CACGTCAAGGCCATGCTGGCTTTCCATGAAATGGGCATTCCCACCGTGGACTACGGCAACAACCTGCGCCAGGTCGCCAA GGACTTCGGCGTGGCCAATGCCTTTGACTACCCCGGTTTTGTGCCCGCCTACATCCGGCCGCTGTTTTGCCGCGGTGTCG GGCCCTTCCGCTGGGTGGCGCTGTCGGGCGATCCGGAGGACATTCGCAAGACCGATGCGAAGATGAAGGAACTGTTCCCC GACAACACGCCCCTGCACCGCTGGCTTGACATGGCCGAAGAGCGCATCAGCTTCCAGGGCCTGCCGGCGCGCATTTGCTG GATTGGCCTGGGCGAACGCCATAGGGCGGGCCTGGCTTTCAACGAGATGGTGAAAAGCGGCGAGCTGAAGGCGCCCATCG TCATCGGCCGCGACCACCTCGACAGCGGCTCCGTCGCTTCGCCGAACCGTGAAACCGAGGCGATGCAGGACGGCAGCGAT GCCGTGAGCGACTGGCCGCTGCTCAATGCCCTGCTCAACACGGCCAGCGGCGCCACCTGGGTCAGCCTGCACCATGGCGG CGGCGTGGGCATGGGTTACTCGCAGCACGCGGGCGTGGTCATTGTGTGTGACGGTACCCTTGAGGCGGCTGAACGCATCG AACGCGTGCTGTTCAATGACCCGGCCACCGGCGTCATGCGCCATGCGGATGCGGGCTATGAGATCGCCCGCCAGAGCGCC CGAGACAACCACCTGAACCTGCCCATGATGGGAGCCTGA
Upstream 100 bases:
>100_bases ACAAGTTGTATAGACAACTACGATTTAACCAACCAAAGCCTGAAGCCCGAGCCCGAAGCCGCGCCAAAGTTTTTTCTTTT TGTTACATGGAGCCTGTCTC
Downstream 100 bases:
>100_bases AACATGTCCGACCATAACGTTGACGATACGGCCGAAATCTACCTGACCTATCTGAACCACCCTGACGTGCAGGCATTGGC CCTGACCGATGCCGAAATCA
Product: urocanate hydratase
Products: NA
Alternate protein names: Urocanase; Imidazolonepropionate hydrolase [H]
Number of amino acids: Translated: 572; Mature: 571
Protein sequence:
>572_residues MSDLMPDLSNTPFQDSQARPVRAPRGSALTCANWQIEAAYRMIQNNLDPEVAENPDELVVYGGIGKAARNWPAFDAILDS LRKLKADETLLVQSGKPVGVFRTHAGAPRVLIANSNLVPKWATWEHFNELDRAGLMMYGQMTAGSWIYIGTQGIVQGTYE TFVEAGRQHFNGDLAGRWVLTAGLGGMGGAQPLAATFAGACSLNIECQQSRIDFRLRTRYVDKQAASLDEALEMIQHHTS RKEAVSIALCGNAAEIVPELVRRAQAGGIRPDIVTDQTSAHDIINGYLPAGWTVARWQAAQKDPAQHAALTKAAGESCAV HVKAMLAFHEMGIPTVDYGNNLRQVAKDFGVANAFDYPGFVPAYIRPLFCRGVGPFRWVALSGDPEDIRKTDAKMKELFP DNTPLHRWLDMAEERISFQGLPARICWIGLGERHRAGLAFNEMVKSGELKAPIVIGRDHLDSGSVASPNRETEAMQDGSD AVSDWPLLNALLNTASGATWVSLHHGGGVGMGYSQHAGVVIVCDGTLEAAERIERVLFNDPATGVMRHADAGYEIARQSA RDNHLNLPMMGA
Sequences:
>Translated_572_residues MSDLMPDLSNTPFQDSQARPVRAPRGSALTCANWQIEAAYRMIQNNLDPEVAENPDELVVYGGIGKAARNWPAFDAILDS LRKLKADETLLVQSGKPVGVFRTHAGAPRVLIANSNLVPKWATWEHFNELDRAGLMMYGQMTAGSWIYIGTQGIVQGTYE TFVEAGRQHFNGDLAGRWVLTAGLGGMGGAQPLAATFAGACSLNIECQQSRIDFRLRTRYVDKQAASLDEALEMIQHHTS RKEAVSIALCGNAAEIVPELVRRAQAGGIRPDIVTDQTSAHDIINGYLPAGWTVARWQAAQKDPAQHAALTKAAGESCAV HVKAMLAFHEMGIPTVDYGNNLRQVAKDFGVANAFDYPGFVPAYIRPLFCRGVGPFRWVALSGDPEDIRKTDAKMKELFP DNTPLHRWLDMAEERISFQGLPARICWIGLGERHRAGLAFNEMVKSGELKAPIVIGRDHLDSGSVASPNRETEAMQDGSD AVSDWPLLNALLNTASGATWVSLHHGGGVGMGYSQHAGVVIVCDGTLEAAERIERVLFNDPATGVMRHADAGYEIARQSA RDNHLNLPMMGA >Mature_571_residues SDLMPDLSNTPFQDSQARPVRAPRGSALTCANWQIEAAYRMIQNNLDPEVAENPDELVVYGGIGKAARNWPAFDAILDSL RKLKADETLLVQSGKPVGVFRTHAGAPRVLIANSNLVPKWATWEHFNELDRAGLMMYGQMTAGSWIYIGTQGIVQGTYET FVEAGRQHFNGDLAGRWVLTAGLGGMGGAQPLAATFAGACSLNIECQQSRIDFRLRTRYVDKQAASLDEALEMIQHHTSR KEAVSIALCGNAAEIVPELVRRAQAGGIRPDIVTDQTSAHDIINGYLPAGWTVARWQAAQKDPAQHAALTKAAGESCAVH VKAMLAFHEMGIPTVDYGNNLRQVAKDFGVANAFDYPGFVPAYIRPLFCRGVGPFRWVALSGDPEDIRKTDAKMKELFPD NTPLHRWLDMAEERISFQGLPARICWIGLGERHRAGLAFNEMVKSGELKAPIVIGRDHLDSGSVASPNRETEAMQDGSDA VSDWPLLNALLNTASGATWVSLHHGGGVGMGYSQHAGVVIVCDGTLEAAERIERVLFNDPATGVMRHADAGYEIARQSAR DNHLNLPMMGA
Specific function: Unknown
COG id: COG2987
COG function: function code E; Urocanate hydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the urocanase family [H]
Homologues:
Organism=Homo sapiens, GI21389467, Length=562, Percent_Identity=34.8754448398576, Blast_Score=298, Evalue=1e-80, Organism=Homo sapiens, GI260306182, Length=207, Percent_Identity=39.6135265700483, Blast_Score=155, Evalue=1e-37, Organism=Caenorhabditis elegans, GI71997891, Length=566, Percent_Identity=35.8657243816254, Blast_Score=310, Evalue=1e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000193 [H]
Pfam domain/function: PF01175 Urocanase [H]
EC number: =4.2.1.49 [H]
Molecular weight: Translated: 62185; Mature: 62054
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS01233 UROCANASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLMPDLSNTPFQDSQARPVRAPRGSALTCANWQIEAAYRMIQNNLDPEVAENPDELVV CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHCCCCCEEE YGGIGKAARNWPAFDAILDSLRKLKADETLLVQSGKPVGVFRTHAGAPRVLIANSNLVPK ECCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCC WATWEHFNELDRAGLMMYGQMTAGSWIYIGTQGIVQGTYETFVEAGRQHFNGDLAGRWVL CCCHHHHHHHHHCCEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEE TAGLGGMGGAQPLAATFAGACSLNIECQQSRIDFRLRTRYVDKQAASLDEALEMIQHHTS EECCCCCCCCCHHHHHHHCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC RKEAVSIALCGNAAEIVPELVRRAQAGGIRPDIVTDQTSAHDIINGYLPAGWTVARWQAA HHHEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCEEHHHHHH QKDPAQHAALTKAAGESCAVHVKAMLAFHEMGIPTVDYGNNLRQVAKDFGVANAFDYPGF CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC VPAYIRPLFCRGVGPFRWVALSGDPEDIRKTDAKMKELFPDNTPLHRWLDMAEERISFQG CHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC LPARICWIGLGERHRAGLAFNEMVKSGELKAPIVIGRDHLDSGSVASPNRETEAMQDGSD CCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCC AVSDWPLLNALLNTASGATWVSLHHGGGVGMGYSQHAGVVIVCDGTLEAAERIERVLFND HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCC PATGVMRHADAGYEIARQSARDNHLNLPMMGA CCHHHHHHCCCCHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SDLMPDLSNTPFQDSQARPVRAPRGSALTCANWQIEAAYRMIQNNLDPEVAENPDELVV CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHCCCCCEEE YGGIGKAARNWPAFDAILDSLRKLKADETLLVQSGKPVGVFRTHAGAPRVLIANSNLVPK ECCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCC WATWEHFNELDRAGLMMYGQMTAGSWIYIGTQGIVQGTYETFVEAGRQHFNGDLAGRWVL CCCHHHHHHHHHCCEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEE TAGLGGMGGAQPLAATFAGACSLNIECQQSRIDFRLRTRYVDKQAASLDEALEMIQHHTS EECCCCCCCCCHHHHHHHCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC RKEAVSIALCGNAAEIVPELVRRAQAGGIRPDIVTDQTSAHDIINGYLPAGWTVARWQAA HHHEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCEEHHHHHH QKDPAQHAALTKAAGESCAVHVKAMLAFHEMGIPTVDYGNNLRQVAKDFGVANAFDYPGF CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC VPAYIRPLFCRGVGPFRWVALSGDPEDIRKTDAKMKELFPDNTPLHRWLDMAEERISFQG CHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC LPARICWIGLGERHRAGLAFNEMVKSGELKAPIVIGRDHLDSGSVASPNRETEAMQDGSD CCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCC AVSDWPLLNALLNTASGATWVSLHHGGGVGMGYSQHAGVVIVCDGTLEAAERIERVLFND HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCC PATGVMRHADAGYEIARQSARDNHLNLPMMGA CCHHHHHHCCCCHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]