| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787079
Identifier: 91787079
GI number: 91787079
Start: 1221479
End: 1222780
Strand: Reverse
Name: 91787079
Synonym: Bpro_1182
Alternate gene names: NA
Gene position: 1222780-1221479 (Counterclockwise)
Preceding gene: 91787087
Following gene: 91787061
Centisome position: 23.51
GC content: 70.2
Gene sequence:
>1302_bases ATGACCAACGGGATCCTTCCCCTGGAACTTTTTTCCGCCTCCATCACGTCCACCGTGTCAGCGCTGGCCGCGGCACTGGC CGCCGGCGCTGTGGTCGGCCTTGAGCGCGGCTGGCGCGAGCGCGAGCGCGCCGAAGGCAGCCGCGTTGCGGGACTGCGGA CGTTCTCGCTGTTTGGCCTGCTGGGTGGCGTGCTCGGCGTCCTGAGCGAGACCCTGGGCCCGTGGCCATTGGCCATGGGG CTCGCCGGCCTGTCCCTCCTGGGGGCAGTGTCCTATCGCGAGAACGTTCGTGCCCATGGCAGCCTGAGCGCAACCACCGC CATCGCCGCGCTGCTGACGTACTCGCTCGGTGCGCTGGCCGGCACAGGCCATCCCGCCATCGCGGTCGGCACGGCAGTCG TCATCGCGGTGCTGCTCGATCTCAAGCCCACGCTGCACCGCTGGCTGCGACTCATGGAACACAGCGAACTCAGCGCGGCG CTGCAGCTGCTCGTGCTGTCGGTCGTCATCCTGCCGCTGCTGCCGGACGCCGGCTACGGCCCCTATGCCGCGCTGAACCC TTATCGTCTGTGGTGGGCGGTGGTCCTGATTGCCGGCATGTCCCTGTGCGGCCATGTCGCCATGCGGTTCACCGGCCCCC AGCGCGGCATCTTCTGGACCGGCTTGCTCGGGGGCCTGGCCTCCTCGACCGCAGCCACGCTCATGCTCGCCCGGCGTGCC CGGGCGGAACCGGCGCTCACCGATGCCGCGGCGGCCGGCACTTTGGCCGCCTGCGGCATGATGTTCCTGCGCATGACGGT GATCGTGTTCACGCTTCAGCCTGCGCTCGGGCGGCCGCTCGGGGTTCCCATGGTGGCTGCAGGCGCCGCCCTTCTCGGCC TGGCCGCGTGGCAGCGAAAGCGCGGCACGTCTGGCGCTGTCGCGTCGGAGGGCGATCCTATCGCGCCCTTCGGCCTGAGC ACAGCGCTCGGCTTCGGCGCGTTTCTCGGCCTGATGGCGGTCCTGACCCAGGCCAGCCAGGCGTGGCTGGGCAACCCCGG CCTGTATGCGCTGGCCACACTGTCGGGGCTGGCCGATGTCGACGCCATCATCATCAGCGTGATGAAAATGCAGGCGGCAG GCAGCCTGGCAGTGACCACCACCGTGGTCGCCGTGGGCCTCGCGACCGCGGCCAACATGGTGGCGAAGGCCTGCATTGCC GCGGTGATCGGCGGGATGCCGCTCGGTCGCCCTGTCGCCGCCGGTTATGGCCTGTCGATTGCTGCCGGCTCGGTGGCCGC AGCCCTCATGACGCTGGGGTAA
Upstream 100 bases:
>100_bases ATGAACGCCACCATGGCGCGTTCGTGGGCACACCAAGGGCTGCCGATTGCCCCGGATCAGGTCTGATTTGCGCAATTTGA CTGACAATACCGTTTCCACA
Downstream 100 bases:
>100_bases GCGAGCCGGGGTTCAAAATTGCCAGCGGAAAACGCGTGGCGCAGCTTCGCCCTGGCGCGCCAGCTTCAGCTCGATCGCAT TGGGCCAGGGCGCGGTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MTNGILPLELFSASITSTVSALAAALAAGAVVGLERGWRERERAEGSRVAGLRTFSLFGLLGGVLGVLSETLGPWPLAMG LAGLSLLGAVSYRENVRAHGSLSATTAIAALLTYSLGALAGTGHPAIAVGTAVVIAVLLDLKPTLHRWLRLMEHSELSAA LQLLVLSVVILPLLPDAGYGPYAALNPYRLWWAVVLIAGMSLCGHVAMRFTGPQRGIFWTGLLGGLASSTAATLMLARRA RAEPALTDAAAAGTLAACGMMFLRMTVIVFTLQPALGRPLGVPMVAAGAALLGLAAWQRKRGTSGAVASEGDPIAPFGLS TALGFGAFLGLMAVLTQASQAWLGNPGLYALATLSGLADVDAIIISVMKMQAAGSLAVTTTVVAVGLATAANMVAKACIA AVIGGMPLGRPVAAGYGLSIAAGSVAAALMTLG
Sequences:
>Translated_433_residues MTNGILPLELFSASITSTVSALAAALAAGAVVGLERGWRERERAEGSRVAGLRTFSLFGLLGGVLGVLSETLGPWPLAMG LAGLSLLGAVSYRENVRAHGSLSATTAIAALLTYSLGALAGTGHPAIAVGTAVVIAVLLDLKPTLHRWLRLMEHSELSAA LQLLVLSVVILPLLPDAGYGPYAALNPYRLWWAVVLIAGMSLCGHVAMRFTGPQRGIFWTGLLGGLASSTAATLMLARRA RAEPALTDAAAAGTLAACGMMFLRMTVIVFTLQPALGRPLGVPMVAAGAALLGLAAWQRKRGTSGAVASEGDPIAPFGLS TALGFGAFLGLMAVLTQASQAWLGNPGLYALATLSGLADVDAIIISVMKMQAAGSLAVTTTVVAVGLATAANMVAKACIA AVIGGMPLGRPVAAGYGLSIAAGSVAAALMTLG >Mature_432_residues TNGILPLELFSASITSTVSALAAALAAGAVVGLERGWRERERAEGSRVAGLRTFSLFGLLGGVLGVLSETLGPWPLAMGL AGLSLLGAVSYRENVRAHGSLSATTAIAALLTYSLGALAGTGHPAIAVGTAVVIAVLLDLKPTLHRWLRLMEHSELSAAL QLLVLSVVILPLLPDAGYGPYAALNPYRLWWAVVLIAGMSLCGHVAMRFTGPQRGIFWTGLLGGLASSTAATLMLARRAR AEPALTDAAAAGTLAACGMMFLRMTVIVFTLQPALGRPLGVPMVAAGAALLGLAAWQRKRGTSGAVASEGDPIAPFGLST ALGFGAFLGLMAVLTQASQAWLGNPGLYALATLSGLADVDAIIISVMKMQAAGSLAVTTTVVAVGLATAANMVAKACIAA VIGGMPLGRPVAAGYGLSIAAGSVAAALMTLG
Specific function: Unknown
COG id: COG3174
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To P.aeruginosa PA0043 and M.thermoautotrophicum MTH1451 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43682; Mature: 43551
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNGILPLELFSASITSTVSALAAALAAGAVVGLERGWRERERAEGSRVAGLRTFSLFGL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LGGVLGVLSETLGPWPLAMGLAGLSLLGAVSYRENVRAHGSLSATTAIAALLTYSLGALA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC GTGHPAIAVGTAVVIAVLLDLKPTLHRWLRLMEHSELSAALQLLVLSVVILPLLPDAGYG CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PYAALNPYRLWWAVVLIAGMSLCGHVAMRFTGPQRGIFWTGLLGGLASSTAATLMLARRA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RAEPALTDAAAAGTLAACGMMFLRMTVIVFTLQPALGRPLGVPMVAAGAALLGLAAWQRK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHH RGTSGAVASEGDPIAPFGLSTALGFGAFLGLMAVLTQASQAWLGNPGLYALATLSGLADV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH DAIIISVMKMQAAGSLAVTTTVVAVGLATAANMVAKACIAAVIGGMPLGRPVAAGYGLSI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHH AAGSVAAALMTLG HHHHHHHHHHHCC >Mature Secondary Structure TNGILPLELFSASITSTVSALAAALAAGAVVGLERGWRERERAEGSRVAGLRTFSLFGL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LGGVLGVLSETLGPWPLAMGLAGLSLLGAVSYRENVRAHGSLSATTAIAALLTYSLGALA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC GTGHPAIAVGTAVVIAVLLDLKPTLHRWLRLMEHSELSAALQLLVLSVVILPLLPDAGYG CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PYAALNPYRLWWAVVLIAGMSLCGHVAMRFTGPQRGIFWTGLLGGLASSTAATLMLARRA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RAEPALTDAAAAGTLAACGMMFLRMTVIVFTLQPALGRPLGVPMVAAGAALLGLAAWQRK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHH RGTSGAVASEGDPIAPFGLSTALGFGAFLGLMAVLTQASQAWLGNPGLYALATLSGLADV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH DAIIISVMKMQAAGSLAVTTTVVAVGLATAANMVAKACIAAVIGGMPLGRPVAAGYGLSI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHH AAGSVAAALMTLG HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]