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The map label for this gene is opuBB [H]

Identifier: 91787053

GI number: 91787053

Start: 1197158

End: 1197781

Strand: Reverse

Name: opuBB [H]

Synonym: Bpro_1156

Alternate gene names: 91787053

Gene position: 1197781-1197158 (Counterclockwise)

Preceding gene: 91787054

Following gene: 91787052

Centisome position: 23.03

GC content: 64.26

Gene sequence:

>624_bases
ATGAAATGGTTCCTGCGCAACTGGACTGACATTGTGTATGCCCTGTGGGAACACATTGCCATCTCCCTGACGGCGCTCAC
GATTGCATTCGCCCTGTCGCTGGTCATTGGCCTCGTGGCCGCCCGGCGAGAACGGCTGTACGGCGCCGTGATGACAGTCT
CCGGGATTTTGTACACCATTCCGACACTGGCCTTTCTCGCTTTCCTGATTCCGCTCGTCGGGCTGGGCCGGACCAACGCC
ATCATCACCATGGTGGCGTTCTCGCTCATGATCCTGATCCGCAGTGTGGCGACGGGCATTCGGGAGGTTCCGGCAGACGT
GATCGATGCCGCCCGTGGCATGGGCATGAGCGCGGCCCAGATCATGCGGCGCATCGAGTTGCCGCTGGCGTTGCCGGTGA
TCGTGGCGGGCCTGCGTGTGTCAGCCGTGACGGTCATCAGCGTGACCGTCGTCGCGGCCTACGTCAACGCGGGCGGGCTG
GGCACGCTGATCTTCAACGGCATTGCCAGCGACCACCCCGCAAAAATATGGGCAGGCGCCTTGACCGCGTGCGCCCTGGC
GGTCAGCGTCGACCTGCTGCTTGCACTGCTCGAGCGGCAGCTCAAACGCCGGCGCGCGGCCTGA

Upstream 100 bases:

>100_bases
GACCGCCCGCTGGGCCCGGACATTGACCGGGTCCAACGCGCTGTAGCCTCGGGCTTGTTCAGTTCATGGGCCGTCAGTCC
AGGGGCCGCGTGACACCGTT

Downstream 100 bases:

>100_bases
ACCCCCAGGAAAAAAATGCTGGCCGACACCTGGAACTTCCTGGCGACCCATCCGACCCAGTTCTATCGGGCCCTGGGCGT
GCACATTGCCCTGTCAGGGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKWFLRNWTDIVYALWEHIAISLTALTIAFALSLVIGLVAARRERLYGAVMTVSGILYTIPTLAFLAFLIPLVGLGRTNA
IITMVAFSLMILIRSVATGIREVPADVIDAARGMGMSAAQIMRRIELPLALPVIVAGLRVSAVTVISVTVVAAYVNAGGL
GTLIFNGIASDHPAKIWAGALTACALAVSVDLLLALLERQLKRRRAA

Sequences:

>Translated_207_residues
MKWFLRNWTDIVYALWEHIAISLTALTIAFALSLVIGLVAARRERLYGAVMTVSGILYTIPTLAFLAFLIPLVGLGRTNA
IITMVAFSLMILIRSVATGIREVPADVIDAARGMGMSAAQIMRRIELPLALPVIVAGLRVSAVTVISVTVVAAYVNAGGL
GTLIFNGIASDHPAKIWAGALTACALAVSVDLLLALLERQLKRRRAA
>Mature_207_residues
MKWFLRNWTDIVYALWEHIAISLTALTIAFALSLVIGLVAARRERLYGAVMTVSGILYTIPTLAFLAFLIPLVGLGRTNA
IITMVAFSLMILIRSVATGIREVPADVIDAARGMGMSAAQIMRRIELPLALPVIVAGLRVSAVTVISVTVVAAYVNAGGL
GTLIFNGIASDHPAKIWAGALTACALAVSVDLLLALLERQLKRRRAA

Specific function: Involved in a high affinity multicomponent binding- protein-dependent transport system for choline; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1174

COG function: function code E; ABC-type proline/glycine betaine transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788451, Length=208, Percent_Identity=33.6538461538462, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1788449, Length=155, Percent_Identity=34.8387096774194, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1789033, Length=173, Percent_Identity=29.4797687861272, Blast_Score=84, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 22092; Mature: 22092

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWFLRNWTDIVYALWEHIAISLTALTIAFALSLVIGLVAARRERLYGAVMTVSGILYTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PTLAFLAFLIPLVGLGRTNAIITMVAFSLMILIRSVATGIREVPADVIDAARGMGMSAAQ
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHH
IMRRIELPLALPVIVAGLRVSAVTVISVTVVAAYVNAGGLGTLIFNGIASDHPAKIWAGA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHH
LTACALAVSVDLLLALLERQLKRRRAA
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKWFLRNWTDIVYALWEHIAISLTALTIAFALSLVIGLVAARRERLYGAVMTVSGILYTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PTLAFLAFLIPLVGLGRTNAIITMVAFSLMILIRSVATGIREVPADVIDAARGMGMSAAQ
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHH
IMRRIELPLALPVIVAGLRVSAVTVISVTVVAAYVNAGGLGTLIFNGIASDHPAKIWAGA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHH
LTACALAVSVDLLLALLERQLKRRRAA
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7592481; 10216873; 9384377 [H]