The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is ynbB [H]

Identifier: 91786982

GI number: 91786982

Start: 1116852

End: 1117832

Strand: Reverse

Name: ynbB [H]

Synonym: Bpro_1084

Alternate gene names: 91786982

Gene position: 1117832-1116852 (Counterclockwise)

Preceding gene: 91786983

Following gene: 91786981

Centisome position: 21.5

GC content: 61.26

Gene sequence:

>981_bases
ATGAACACCTTTCTGCGCAACCTGACACCCGGCCAGCAGGTGGGCCTGCTGTTTGTGGTGGTTTTTGGCCTGCTTCTCAT
CATCAGCGTGGCTGCGTTTGTCTTGTCGCTGCAGGACCGGCACGAGGATGACCTGCACACGCAAAAGCTCAAGGATTTCA
ATGGCCTGCTGAGAACCTCGTGGGTGATGTGCATGGTGTTCTGGGTCGGCTGGACCCTGGGTGAAACCGCGGCCACGGTG
CTGTTTGGCCTGGTGGCCTTTTTTGCGCTGCGCGAATTCATCACGCTCTCGCCGACCCGGCAGGGCGATCACCGCAGCCT
GGTGCTGGCTTTTTTTGTGGTGCTGCCCGCGCAGTTTGCCCTGGTCATCACCCGGCATTTCGACCTCGTCACCGTGTTCA
TCCCGGTTTATGTGTTCCTGGCAATTCCAGTCGTCAGCGCGCTGGCGGATGACCCGCACCGCTTCCTGGAGCGCAACGCC
AAATTGCAGTGGGGCATCATGGTCTGCGTCTACGGCATCAGCCATGTGCCGGCCCTGCTGCTGCTGAAGTTTCCGAATTA
CCAGGGCAAGAATGCCTTCCTCGTGTTTTTCCTGGTGTTTGTCGTGCAGAGCTGCATGATCGTGCAGCACCTGGCCAGCC
GCCGGCTGGCGCGGGCGCCGATTGCGCCCAACGTGAGCAAAAGCTTTGAATGGACCAGCTGGCTGACCGCCGTGGTCGTG
GCCAGCCTGGTCGGCGGCCTGATGGCGGGCCTGACGCCCTTCAAGCCGGCCCAGGCGGTGGCCATGGCCCTGATCGCCTG
CGTGGCCGGCTCCATGGGCCACCTGGTGATGAAGGCCCTCAAACGCGACCGCGGGATTACCAACTGGGGTTCGGAAGGAA
AATCAGTCACCGGCGCCAGCGGTTTGCTGGACCGCGTCGATGCCCTGTGTTTTGCCGCACCGATATTCTTCCATTCGGTT
CGATGGTATTTTGGCCTCTAG

Upstream 100 bases:

>100_bases
CATCGCGGTGGGCGCCGGGGAAGACCGAGGCAGTTTTCTGGCCCGCGCGCGCCAGGCCGTCATGGACCTGCGGCAAACCT
GATCAAGCACGGATGCTCCG

Downstream 100 bases:

>100_bases
CCCTTTCATTTCACTTTCATTTCAAATCCTGCGCAAGCAGCTACCAAATTTATAGCCTATGCGTATTCTTGGAATTGACC
CTGGCTTGCAGATCGCCGGA

Product: phosphatidate cytidylyltransferase

Products: diphosphate; CDPdiacylglycerol

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MNTFLRNLTPGQQVGLLFVVVFGLLLIISVAAFVLSLQDRHEDDLHTQKLKDFNGLLRTSWVMCMVFWVGWTLGETAATV
LFGLVAFFALREFITLSPTRQGDHRSLVLAFFVVLPAQFALVITRHFDLVTVFIPVYVFLAIPVVSALADDPHRFLERNA
KLQWGIMVCVYGISHVPALLLLKFPNYQGKNAFLVFFLVFVVQSCMIVQHLASRRLARAPIAPNVSKSFEWTSWLTAVVV
ASLVGGLMAGLTPFKPAQAVAMALIACVAGSMGHLVMKALKRDRGITNWGSEGKSVTGASGLLDRVDALCFAAPIFFHSV
RWYFGL

Sequences:

>Translated_326_residues
MNTFLRNLTPGQQVGLLFVVVFGLLLIISVAAFVLSLQDRHEDDLHTQKLKDFNGLLRTSWVMCMVFWVGWTLGETAATV
LFGLVAFFALREFITLSPTRQGDHRSLVLAFFVVLPAQFALVITRHFDLVTVFIPVYVFLAIPVVSALADDPHRFLERNA
KLQWGIMVCVYGISHVPALLLLKFPNYQGKNAFLVFFLVFVVQSCMIVQHLASRRLARAPIAPNVSKSFEWTSWLTAVVV
ASLVGGLMAGLTPFKPAQAVAMALIACVAGSMGHLVMKALKRDRGITNWGSEGKSVTGASGLLDRVDALCFAAPIFFHSV
RWYFGL
>Mature_326_residues
MNTFLRNLTPGQQVGLLFVVVFGLLLIISVAAFVLSLQDRHEDDLHTQKLKDFNGLLRTSWVMCMVFWVGWTLGETAATV
LFGLVAFFALREFITLSPTRQGDHRSLVLAFFVVLPAQFALVITRHFDLVTVFIPVYVFLAIPVVSALADDPHRFLERNA
KLQWGIMVCVYGISHVPALLLLKFPNYQGKNAFLVFFLVFVVQSCMIVQHLASRRLARAPIAPNVSKSFEWTSWLTAVVV
ASLVGGLMAGLTPFKPAQAVAMALIACVAGSMGHLVMKALKRDRGITNWGSEGKSVTGASGLLDRVDALCFAAPIFFHSV
RWYFGL

Specific function: Unknown

COG id: COG4589

COG function: function code R; Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI1787677, Length=244, Percent_Identity=34.8360655737705, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: 2.7.7.41

Molecular weight: Translated: 36046; Mature: 36046

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTFLRNLTPGQQVGLLFVVVFGLLLIISVAAFVLSLQDRHEDDLHTQKLKDFNGLLRTS
CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
WVMCMVFWVGWTLGETAATVLFGLVAFFALREFITLSPTRQGDHRSLVLAFFVVLPAQFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
LVITRHFDLVTVFIPVYVFLAIPVVSALADDPHRFLERNAKLQWGIMVCVYGISHVPALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LLKFPNYQGKNAFLVFFLVFVVQSCMIVQHLASRRLARAPIAPNVSKSFEWTSWLTAVVV
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
ASLVGGLMAGLTPFKPAQAVAMALIACVAGSMGHLVMKALKRDRGITNWGSEGKSVTGAS
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
GLLDRVDALCFAAPIFFHSVRWYFGL
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTFLRNLTPGQQVGLLFVVVFGLLLIISVAAFVLSLQDRHEDDLHTQKLKDFNGLLRTS
CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
WVMCMVFWVGWTLGETAATVLFGLVAFFALREFITLSPTRQGDHRSLVLAFFVVLPAQFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
LVITRHFDLVTVFIPVYVFLAIPVVSALADDPHRFLERNAKLQWGIMVCVYGISHVPALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LLKFPNYQGKNAFLVFFLVFVVQSCMIVQHLASRRLARAPIAPNVSKSFEWTSWLTAVVV
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
ASLVGGLMAGLTPFKPAQAVAMALIACVAGSMGHLVMKALKRDRGITNWGSEGKSVTGAS
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
GLLDRVDALCFAAPIFFHSVRWYFGL
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: CTP; phosphatidate

Specific reaction: CTP + phosphatidate = diphosphate + CDP-diacylglycerol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]