| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786948
Identifier: 91786948
GI number: 91786948
Start: 1075151
End: 1076782
Strand: Reverse
Name: 91786948
Synonym: Bpro_1049
Alternate gene names: NA
Gene position: 1076782-1075151 (Counterclockwise)
Preceding gene: 91786949
Following gene: 91786946
Centisome position: 20.71
GC content: 65.87
Gene sequence:
>1632_bases ATGATTCGCCTGACTGAACTCAAACTTCCGCTGGACCACGCGGAAGACGCCCTGCCGGCCCTGATGGCCCGCACGCTGGG CATCGCCGCCTCCGATATCGCGACTTTCCAGGTCCACAAGCGCAGCTTTGACGCCCGCAAGGCGGAGCTGCTGCAGGTGT ACATCGCCGATGTGGAACTGGCCCCCGCGCTGGAAGCTGCATTGCTCGCGAAGTTTGCCGGCCACCCGCACATCCTGCCC TCACCCGACATGGCCTACCACCCGGTGGGCACGGCACCCCAAGGCCTGCCGCTGCGCCCGGTGGTGATCGGCTTTGGCCC GTGCGGCATCTTTGCGGCCCTGCTGCTGGCGCAGATGGGCTTCAAGCCCATCGTGCTCGAGCGCGGCAAAACCGTGCGCC AGCGCACCAAGGACACCTGGGGCCTGTGGCGCAAGAACGTGCTGAATCCGGAATCCAATGTGCAATTTGGCGAAGGCGGC GCGGGAACATTTTCCGACGGCAAGCTCTACAGCCAGATCAAGGACCCGCGGCACCTCGGCCGCAAGGTCATGAACGAATT TGTCAAGGCCGGGGCGCCTGCCGACATCCTCTACGAAGCCCATCCCCACATTGGCACCTTCAAACTGGTCAAGGTGGTGG AAAACATGCGCGAGCAGATCATCGCGCTGGGCGGTGAAATACGCTTTGAGCAGCGCGTAACGGACGTGCTGATCGAGGTC GGCCCCGGCGGCAAGCACCTGCGCGGCCTCACGGTGCAAAACCAGGCCACCGGAGAAACGCACGAGCTGCGCGCCGACCA CGTCGTGATGGCGCTGGGCCACAGCTCGCGCGACACCTTTGCCATGCTCTACGCCCGCGGCGTGTACATCGAGGCCAAAC CCTTTTCCATCGGCTTTCGCGTGGAGCACCCTCAGGGCATCATCGACCGCGCACGCTGGGGCCGGCATGCCAGCCACCCG GCCCTGGGCGCTGCCGAATACAAGCTGGTGCACCACGCCAGCAATGGCCGCTCGGTCTACAGCTTTTGCATGTGCCCGGG CGGCACGGTGGTGGCCGCTACCTCGGAGCCCGAACGTGTGGTGACCAACGGCATGAGCCAGTATTCGCGCAACGAGCGCA ATGCCAACGCCGGCATCGTGGTGGGGATTGACCCGCGCGATTACCCGGGCGATGCGCTGGCCGGCATCGACCTGCAGCGC CGGCTGGAGTCGCATGCCTATGTGCTGGGCGGCAGCAATTACCAGGCGCCGGCGCAGCTGGTCGGCGACTTTGTGGCGGG CCGACCATCGACCGCGCTGGGCAGCATCACGCCCTCGTACAAGCCCGGCGTAACCATCGGTGATCTGTCGTCAGCCTTGC CCGGCTACGCGATTGACGCCATGCGCGAAGCCTTTCCCGCCTTTGGCCGCAAGATCAAGGGCTTTGACACGCATGACGCC GTGCTGACCGGCGTGGAGACGCGCACCTCCTCACCGATCAAGATCAGCCGCGGCGAAGACTTGCAAAGCCTCAATGTGCG CGGCCTCTATCCCGCCGGCGAAGGCGCCAGCTACGCCGGCGGCATCCTGTCGGCGGGCGTGGACGGCATCAAGGTGGCCG AGGCCGTGGCGCGCAACCTGCTGAGCGCCTGA
Upstream 100 bases:
>100_bases GTCTGGCAGGCTTCACGGGGCCTATTATCCGTTATCCGCCAGCGCGGCGTATGACGGGGACCCTTTAAAATAAGGGCTGC TTGATCAACACGAGCCCCTG
Downstream 100 bases:
>100_bases TCAGCAGGCAGCCGCCTGGGCTACGGCCCGGTCGCCCGGCACGGCACGGCACGGCACGCGCGATGATGGTGCGCTGATTT CAGACGGGCCTTCCTGCTTC
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MIRLTELKLPLDHAEDALPALMARTLGIAASDIATFQVHKRSFDARKAELLQVYIADVELAPALEAALLAKFAGHPHILP SPDMAYHPVGTAPQGLPLRPVVIGFGPCGIFAALLLAQMGFKPIVLERGKTVRQRTKDTWGLWRKNVLNPESNVQFGEGG AGTFSDGKLYSQIKDPRHLGRKVMNEFVKAGAPADILYEAHPHIGTFKLVKVVENMREQIIALGGEIRFEQRVTDVLIEV GPGGKHLRGLTVQNQATGETHELRADHVVMALGHSSRDTFAMLYARGVYIEAKPFSIGFRVEHPQGIIDRARWGRHASHP ALGAAEYKLVHHASNGRSVYSFCMCPGGTVVAATSEPERVVTNGMSQYSRNERNANAGIVVGIDPRDYPGDALAGIDLQR RLESHAYVLGGSNYQAPAQLVGDFVAGRPSTALGSITPSYKPGVTIGDLSSALPGYAIDAMREAFPAFGRKIKGFDTHDA VLTGVETRTSSPIKISRGEDLQSLNVRGLYPAGEGASYAGGILSAGVDGIKVAEAVARNLLSA
Sequences:
>Translated_543_residues MIRLTELKLPLDHAEDALPALMARTLGIAASDIATFQVHKRSFDARKAELLQVYIADVELAPALEAALLAKFAGHPHILP SPDMAYHPVGTAPQGLPLRPVVIGFGPCGIFAALLLAQMGFKPIVLERGKTVRQRTKDTWGLWRKNVLNPESNVQFGEGG AGTFSDGKLYSQIKDPRHLGRKVMNEFVKAGAPADILYEAHPHIGTFKLVKVVENMREQIIALGGEIRFEQRVTDVLIEV GPGGKHLRGLTVQNQATGETHELRADHVVMALGHSSRDTFAMLYARGVYIEAKPFSIGFRVEHPQGIIDRARWGRHASHP ALGAAEYKLVHHASNGRSVYSFCMCPGGTVVAATSEPERVVTNGMSQYSRNERNANAGIVVGIDPRDYPGDALAGIDLQR RLESHAYVLGGSNYQAPAQLVGDFVAGRPSTALGSITPSYKPGVTIGDLSSALPGYAIDAMREAFPAFGRKIKGFDTHDA VLTGVETRTSSPIKISRGEDLQSLNVRGLYPAGEGASYAGGILSAGVDGIKVAEAVARNLLSA >Mature_543_residues MIRLTELKLPLDHAEDALPALMARTLGIAASDIATFQVHKRSFDARKAELLQVYIADVELAPALEAALLAKFAGHPHILP SPDMAYHPVGTAPQGLPLRPVVIGFGPCGIFAALLLAQMGFKPIVLERGKTVRQRTKDTWGLWRKNVLNPESNVQFGEGG AGTFSDGKLYSQIKDPRHLGRKVMNEFVKAGAPADILYEAHPHIGTFKLVKVVENMREQIIALGGEIRFEQRVTDVLIEV GPGGKHLRGLTVQNQATGETHELRADHVVMALGHSSRDTFAMLYARGVYIEAKPFSIGFRVEHPQGIIDRARWGRHASHP ALGAAEYKLVHHASNGRSVYSFCMCPGGTVVAATSEPERVVTNGMSQYSRNERNANAGIVVGIDPRDYPGDALAGIDLQR RLESHAYVLGGSNYQAPAQLVGDFVAGRPSTALGSITPSYKPGVTIGDLSSALPGYAIDAMREAFPAFGRKIKGFDTHDA VLTGVETRTSSPIKISRGEDLQSLNVRGLYPAGEGASYAGGILSAGVDGIKVAEAVARNLLSA
Specific function: Unknown
COG id: COG2509
COG function: function code R; Uncharacterized FAD-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 58304; Mature: 58304
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLTELKLPLDHAEDALPALMARTLGIAASDIATFQVHKRSFDARKAELLQVYIADVEL CEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHEEEEHHHHCCHHHHHHHHHHHHCCHH APALEAALLAKFAGHPHILPSPDMAYHPVGTAPQGLPLRPVVIGFGPCGIFAALLLAQMG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCC FKPIVLERGKTVRQRTKDTWGLWRKNVLNPESNVQFGEGGAGTFSDGKLYSQIKDPRHLG CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHCCHHHHH RKVMNEFVKAGAPADILYEAHPHIGTFKLVKVVENMREQIIALGGEIRFEQRVTDVLIEV HHHHHHHHHCCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHEEEEEEE GPGGKHLRGLTVQNQATGETHELRADHVVMALGHSSRDTFAMLYARGVYIEAKPFSIGFR CCCCCCEEEEEECCCCCCCHHHHCCCEEEEEECCCCCCCEEEEEECCEEEEECCEEEEEE VEHPQGIIDRARWGRHASHPALGAAEYKLVHHASNGRSVYSFCMCPGGTVVAATSEPERV EECCCCHHHHHHCCCCCCCCCCCCHHEEEEEECCCCCEEEEEEECCCCEEEEECCCCHHH VTNGMSQYSRNERNANAGIVVGIDPRDYPGDALAGIDLQRRLESHAYVLGGSNYQAPAQL HHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEECCHHHHHHHHCEEEEECCCCCCHHHH VGDFVAGRPSTALGSITPSYKPGVTIGDLSSALPGYAIDAMREAFPAFGRKIKGFDTHDA HHHHHCCCCCCCCCCCCCCCCCCCEECCHHHCCCCHHHHHHHHHHHHHCCEECCCCCCHH VLTGVETRTSSPIKISRGEDLQSLNVRGLYPAGEGASYAGGILSAGVDGIKVAEAVARNL HEECCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH LSA HCC >Mature Secondary Structure MIRLTELKLPLDHAEDALPALMARTLGIAASDIATFQVHKRSFDARKAELLQVYIADVEL CEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHEEEEHHHHCCHHHHHHHHHHHHCCHH APALEAALLAKFAGHPHILPSPDMAYHPVGTAPQGLPLRPVVIGFGPCGIFAALLLAQMG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCC FKPIVLERGKTVRQRTKDTWGLWRKNVLNPESNVQFGEGGAGTFSDGKLYSQIKDPRHLG CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHCCHHHHH RKVMNEFVKAGAPADILYEAHPHIGTFKLVKVVENMREQIIALGGEIRFEQRVTDVLIEV HHHHHHHHHCCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHEEEEEEE GPGGKHLRGLTVQNQATGETHELRADHVVMALGHSSRDTFAMLYARGVYIEAKPFSIGFR CCCCCCEEEEEECCCCCCCHHHHCCCEEEEEECCCCCCCEEEEEECCEEEEECCEEEEEE VEHPQGIIDRARWGRHASHPALGAAEYKLVHHASNGRSVYSFCMCPGGTVVAATSEPERV EECCCCHHHHHHCCCCCCCCCCCCHHEEEEEECCCCCEEEEEEECCCCEEEEECCCCHHH VTNGMSQYSRNERNANAGIVVGIDPRDYPGDALAGIDLQRRLESHAYVLGGSNYQAPAQL HHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEECCHHHHHHHHCEEEEECCCCCCHHHH VGDFVAGRPSTALGSITPSYKPGVTIGDLSSALPGYAIDAMREAFPAFGRKIKGFDTHDA HHHHHCCCCCCCCCCCCCCCCCCCEECCHHHCCCCHHHHHHHHHHHHHCCEECCCCCCHH VLTGVETRTSSPIKISRGEDLQSLNVRGLYPAGEGASYAGGILSAGVDGIKVAEAVARNL HEECCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH LSA HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8396545 [H]