| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is ves [H]
Identifier: 91786935
GI number: 91786935
Start: 1063252
End: 1063845
Strand: Reverse
Name: ves [H]
Synonym: Bpro_1036
Alternate gene names: 91786935
Gene position: 1063845-1063252 (Counterclockwise)
Preceding gene: 91786936
Following gene: 91786934
Centisome position: 20.46
GC content: 72.56
Gene sequence:
>594_bases ATGACGCTGCAGCGCTTCGCCATCGACGACCTGAAGCCCACGCCGTGGAAGAACGGCGGCGGCACCACGCGCGAAATCGT CTGCCGACCGCCGGGCGCAGGCATGGACGGCTTCGACTGGCGGGTCAGCATCGCCACCATCGCCGCGCCCGGGCCGTTCT CGGCCTTTCCCGGCGTGGACCGCGTGATCATGCTGCTGGAGGGCGCGGGTGTGCGCCTGCGAGCCGGCACGGCGGGCGTG GACCACCGGCTGGACACGCCGCTGCGGCCCTTTGCCTTTGCCGGCGATGTGGCCCTGGACTGCGACCTGCTGGGCGGCCC CTCGACCGATTTCAACGTCATGACCCGGCGCGGCAAGCTGCGGGCCGAGGTGCAGGTGCTGCACGCGGCCGGCGACCTTG CCCCGGCCGGGCGCGGCCTGCTGCTGGCGCTGCGCGGGCCGTGGCACTTGCAGGCTGGGGCAGAGCCCTCCTTGACATGC GAAGCCGGCACGGGTGTCTGGTGGGACGGCACGACACAGGGCTGGCGCGCAACGCCGCAAAGCCTGGATGCGGCACTGGT CGTGGTGCGCCTGCTGGCCGTCCAGGCAGCTTGA
Upstream 100 bases:
>100_bases CTCGCCGGACTTTCCCGGGCTGGTCGACCAGCTCGCGGCGGGCGTGCCCATGAGCCACCCGCTGTTCCCGCAGTTGATCG GCTGACGAGAGGAGGCATCC
Downstream 100 bases:
>100_bases AGGCGCCCGGTCAAATGCATCAGAATGGCCTCTGGTCCATGTCAAAACCTAACGATCAGCTATTTACTCAATAGCAAAAC AAGCCTCTGCACATAACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MTLQRFAIDDLKPTPWKNGGGTTREIVCRPPGAGMDGFDWRVSIATIAAPGPFSAFPGVDRVIMLLEGAGVRLRAGTAGV DHRLDTPLRPFAFAGDVALDCDLLGGPSTDFNVMTRRGKLRAEVQVLHAAGDLAPAGRGLLLALRGPWHLQAGAEPSLTC EAGTGVWWDGTTQGWRATPQSLDAALVVVRLLAVQAA
Sequences:
>Translated_197_residues MTLQRFAIDDLKPTPWKNGGGTTREIVCRPPGAGMDGFDWRVSIATIAAPGPFSAFPGVDRVIMLLEGAGVRLRAGTAGV DHRLDTPLRPFAFAGDVALDCDLLGGPSTDFNVMTRRGKLRAEVQVLHAAGDLAPAGRGLLLALRGPWHLQAGAEPSLTC EAGTGVWWDGTTQGWRATPQSLDAALVVVRLLAVQAA >Mature_196_residues TLQRFAIDDLKPTPWKNGGGTTREIVCRPPGAGMDGFDWRVSIATIAAPGPFSAFPGVDRVIMLLEGAGVRLRAGTAGVD HRLDTPLRPFAFAGDVALDCDLLGGPSTDFNVMTRRGKLRAEVQVLHAAGDLAPAGRGLLLALRGPWHLQAGAEPSLTCE AGTGVWWDGTTQGWRATPQSLDAALVVVRLLAVQAA
Specific function: Unknown
COG id: COG3758
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ves family [H]
Homologues:
Organism=Escherichia coli, GI87081963, Length=169, Percent_Identity=36.094674556213, Blast_Score=100, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR010282 [H]
Pfam domain/function: PF05962 HutD [H]
EC number: NA
Molecular weight: Translated: 20760; Mature: 20629
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS00024 HEMOPEXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLQRFAIDDLKPTPWKNGGGTTREIVCRPPGAGMDGFDWRVSIATIAAPGPFSAFPGVD CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC RVIMLLEGAGVRLRAGTAGVDHRLDTPLRPFAFAGDVALDCDLLGGPSTDFNVMTRRGKL EEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCEEEECCCCC RAEVQVLHAAGDLAPAGRGLLLALRGPWHLQAGAEPSLTCEAGTGVWWDGTTQGWRATPQ EEEEEEEEECCCCCCCCCCEEEEECCCEEEECCCCCCEEEECCCCEEECCCCCCCCCCHH SLDAALVVVRLLAVQAA HHHHHHHHHHHHHHCCC >Mature Secondary Structure TLQRFAIDDLKPTPWKNGGGTTREIVCRPPGAGMDGFDWRVSIATIAAPGPFSAFPGVD CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC RVIMLLEGAGVRLRAGTAGVDHRLDTPLRPFAFAGDVALDCDLLGGPSTDFNVMTRRGKL EEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCEEEECCCCC RAEVQVLHAAGDLAPAGRGLLLALRGPWHLQAGAEPSLTCEAGTGVWWDGTTQGWRATPQ EEEEEEEEECCCCCCCCCCEEEEECCCEEEECCCCCCEEEECCCCEEECCCCCCCCCCHH SLDAALVVVRLLAVQAA HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA