| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is sam [H]
Identifier: 91786904
GI number: 91786904
Start: 1019519
End: 1020424
Strand: Reverse
Name: sam [H]
Synonym: Bpro_1004
Alternate gene names: 91786904
Gene position: 1020424-1019519 (Counterclockwise)
Preceding gene: 91786905
Following gene: 91786903
Centisome position: 19.62
GC content: 64.24
Gene sequence:
>906_bases ATGGCCGGCCTCGCAAGAACCGCTCCCCACGCTCTGACCGGCATCGCACTCCAGGTGGCGGCCATGGCCTGCTTTGCCCT GCTGGACACCACCACAAAATTCATCAGCGCCAGTGTGCCGGTGCTGATGGCCCTGTGGTTTCGCTACGCGTTCCAGGCGG TTGCAACCACGGTGGCGGTGCTTCCGGTGCGCGGCCGCTCGCTGCTGCGCACGGCCCACCCGCGCTTTCAATGCCTGCGC GGTGTGCTGCTGCTGACCTCCAGCATGCTGGCGTTCTTCAGCCTCAAGTACATGCCGGTGGGCGAATTCACGGCCATCGT GATGATCTCGCCGCTCGTGATCACCCTGCTCGCGTCGCTGACGCTGGGCGAACGGGTCTCCGCGTTACGCTGGACGCTGG TGATCGGCGGTTTTTTGGGCACCCTGATCATCATCCGGCCTGGCGACGACACCTTTGACTGGACCATGCTGCTGCCCTTG GCGCTGGTGGCCACCCATGCCTGGTTCCAGATCCTGACCAGCCGGCTGGCCCGCACCGAGGACCCCGTCACCATGCATTT TTATACCGGCTGGGTGGGCACACTGATCGCTTCGCTGGCCCTGCCATTTGCCTGGACCTGGCTGGACTCCTGGACGCTGT GGGGCGGCCTGGTGCTCATGGGAGTGATGGGCACAGTCGGACATTTCATGATGATCCTGGCCTATGGCCGCGCACCCGCG TCGACACTGACACCCTTTCTTTACACGCAGATCGGTTTTGCGATGATAGGCGGCTGGCTGGCGTTTTCACATGTACCCGA TCGCTGGTCGATACTCGGCATAGCCCTGATTGCGACGTGCGGCGCGGCCGGCGCGTGGCTTTCGGTGCGCGAGACCCGGG TCCCTGTTGCCCCCCCTGAATCCTGA
Upstream 100 bases:
>100_bases TTCACAGCCCCGACGAGAGCCACACCGACCTCGGCACCCTGCCGTTTTTACCAGGCGAGCTCACCCCCGTGTGGGACCTG CTGGCGGACCGGATCCAGTA
Downstream 100 bases:
>100_bases AACACCGCCATGGCCCAGTTTTTCGAAGTTCATCCCGACAACCCCCAGCTGCGGCTGCTCAAGCAGGCGGTGAACCTGCT GGCGCGCGGGGGCGTCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MAGLARTAPHALTGIALQVAAMACFALLDTTTKFISASVPVLMALWFRYAFQAVATTVAVLPVRGRSLLRTAHPRFQCLR GVLLLTSSMLAFFSLKYMPVGEFTAIVMISPLVITLLASLTLGERVSALRWTLVIGGFLGTLIIIRPGDDTFDWTMLLPL ALVATHAWFQILTSRLARTEDPVTMHFYTGWVGTLIASLALPFAWTWLDSWTLWGGLVLMGVMGTVGHFMMILAYGRAPA STLTPFLYTQIGFAMIGGWLAFSHVPDRWSILGIALIATCGAAGAWLSVRETRVPVAPPES
Sequences:
>Translated_301_residues MAGLARTAPHALTGIALQVAAMACFALLDTTTKFISASVPVLMALWFRYAFQAVATTVAVLPVRGRSLLRTAHPRFQCLR GVLLLTSSMLAFFSLKYMPVGEFTAIVMISPLVITLLASLTLGERVSALRWTLVIGGFLGTLIIIRPGDDTFDWTMLLPL ALVATHAWFQILTSRLARTEDPVTMHFYTGWVGTLIASLALPFAWTWLDSWTLWGGLVLMGVMGTVGHFMMILAYGRAPA STLTPFLYTQIGFAMIGGWLAFSHVPDRWSILGIALIATCGAAGAWLSVRETRVPVAPPES >Mature_300_residues AGLARTAPHALTGIALQVAAMACFALLDTTTKFISASVPVLMALWFRYAFQAVATTVAVLPVRGRSLLRTAHPRFQCLRG VLLLTSSMLAFFSLKYMPVGEFTAIVMISPLVITLLASLTLGERVSALRWTLVIGGFLGTLIIIRPGDDTFDWTMLLPLA LVATHAWFQILTSRLARTEDPVTMHFYTGWVGTLIASLALPFAWTWLDSWTLWGGLVLMGVMGTVGHFMMILAYGRAPAS TLTPFLYTQIGFAMIGGWLAFSHVPDRWSILGIALIATCGAAGAWLSVRETRVPVAPPES
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32689; Mature: 32558
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLARTAPHALTGIALQVAAMACFALLDTTTKFISASVPVLMALWFRYAFQAVATTVAV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPVRGRSLLRTAHPRFQCLRGVLLLTSSMLAFFSLKYMPVGEFTAIVMISPLVITLLASL HCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH TLGERVSALRWTLVIGGFLGTLIIIRPGDDTFDWTMLLPLALVATHAWFQILTSRLARTE HHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC DPVTMHFYTGWVGTLIASLALPFAWTWLDSWTLWGGLVLMGVMGTVGHFMMILAYGRAPA CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH STLTPFLYTQIGFAMIGGWLAFSHVPDRWSILGIALIATCGAAGAWLSVRETRVPVAPPE HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCC S C >Mature Secondary Structure AGLARTAPHALTGIALQVAAMACFALLDTTTKFISASVPVLMALWFRYAFQAVATTVAV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPVRGRSLLRTAHPRFQCLRGVLLLTSSMLAFFSLKYMPVGEFTAIVMISPLVITLLASL HCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH TLGERVSALRWTLVIGGFLGTLIIIRPGDDTFDWTMLLPLALVATHAWFQILTSRLARTE HHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC DPVTMHFYTGWVGTLIASLALPFAWTWLDSWTLWGGLVLMGVMGTVGHFMMILAYGRAPA CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH STLTPFLYTQIGFAMIGGWLAFSHVPDRWSILGIALIATCGAAGAWLSVRETRVPVAPPE HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA