| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786892
Identifier: 91786892
GI number: 91786892
Start: 1008654
End: 1009334
Strand: Reverse
Name: 91786892
Synonym: Bpro_0992
Alternate gene names: NA
Gene position: 1009334-1008654 (Counterclockwise)
Preceding gene: 91786896
Following gene: 91786879
Centisome position: 19.41
GC content: 61.53
Gene sequence:
>681_bases ATGGCCAGTCCCCAGATCAAACGCGCATCGCCGGCATTCGAACCTGCGAAGAAAACGGCGACTGTGAAGACAGTGAAAGC GGTCCGTCGCACCCAGGAGGACCGCAGCCGCACTACCAAGGAAAAGCTGCTGGCCGCCACCATCGAAGTGCTTTTGCGCG ATGGCTACAGCGGCCTGACGATGAAGGAGGTGGCCAAGGCCTCGGGGGTATCCAACGGGGCGCTGATGCACCACTATGCC AACAAGGCCGAGCTCGTCGTCGAGGCGACGGCCATGGTGTATGAGGAAGCCATCGTGCGCGGACAGCGCATGGCGCAGAC CGCCGGTGCGGCTGAAAAGCCGATTGAAGGTTTCATCACCGACTGCCTGAGCGTCTACTTTGACTGGCCCTTCCTGGCTG CGCTCGAAAGCATCGTCGTCGCACGCACCGACCCGGACCTGATGACCAGGATCCTGCCGGTGATGGAGCGTTACCGCGTC ACCTGCGACGACATCTGGATGGGTGTGTTCAAAAAAGCCGGCGTACCCACCAAGCGGGCCCGCGTGCTGCTGAACCTGAG CCTGAACCTCGTCCGGGGCATGGGCCTAAACCGTCTCTGGCGACATGACGACGCGCATTACCAGATCTACCTCAAGGAAT GGATCACGATGGCGAACCAGCAGCTGGCGCAGCTGAAGTAG
Upstream 100 bases:
>100_bases ACGGTTTGTAAGTTAACGAGAAGAATTTTCTAGGGGTTGACCCGCATACGGGGTCCATAATCACGGCTTCGCACCCATCA ACACTCAAAAGGTTTACCGG
Downstream 100 bases:
>100_bases CGGACTCGCCGCCGCACCTCACTCGGCGTCGGGCTGGCGTGAAGGAGCCGCCGCAGCGAAAGCAGGCAGTGCCTGGCAGG TGTTGAATATCGCCGTCAAT
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Tetr Family Transcriptional Regulator; Transcriptional Regulator TetR
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MASPQIKRASPAFEPAKKTATVKTVKAVRRTQEDRSRTTKEKLLAATIEVLLRDGYSGLTMKEVAKASGVSNGALMHHYA NKAELVVEATAMVYEEAIVRGQRMAQTAGAAEKPIEGFITDCLSVYFDWPFLAALESIVVARTDPDLMTRILPVMERYRV TCDDIWMGVFKKAGVPTKRARVLLNLSLNLVRGMGLNRLWRHDDAHYQIYLKEWITMANQQLAQLK
Sequences:
>Translated_226_residues MASPQIKRASPAFEPAKKTATVKTVKAVRRTQEDRSRTTKEKLLAATIEVLLRDGYSGLTMKEVAKASGVSNGALMHHYA NKAELVVEATAMVYEEAIVRGQRMAQTAGAAEKPIEGFITDCLSVYFDWPFLAALESIVVARTDPDLMTRILPVMERYRV TCDDIWMGVFKKAGVPTKRARVLLNLSLNLVRGMGLNRLWRHDDAHYQIYLKEWITMANQQLAQLK >Mature_225_residues ASPQIKRASPAFEPAKKTATVKTVKAVRRTQEDRSRTTKEKLLAATIEVLLRDGYSGLTMKEVAKASGVSNGALMHHYAN KAELVVEATAMVYEEAIVRGQRMAQTAGAAEKPIEGFITDCLSVYFDWPFLAALESIVVARTDPDLMTRILPVMERYRVT CDDIWMGVFKKAGVPTKRARVLLNLSLNLVRGMGLNRLWRHDDAHYQIYLKEWITMANQQLAQLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25383; Mature: 25252
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPQIKRASPAFEPAKKTATVKTVKAVRRTQEDRSRTTKEKLLAATIEVLLRDGYSGLT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH MKEVAKASGVSNGALMHHYANKAELVVEATAMVYEEAIVRGQRMAQTAGAAEKPIEGFIT HHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH DCLSVYFDWPFLAALESIVVARTDPDLMTRILPVMERYRVTCDDIWMGVFKKAGVPTKRA HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHH RVLLNLSLNLVRGMGLNRLWRHDDAHYQIYLKEWITMANQQLAQLK HHHHHHHHHHHHCCCHHHHHCCCCCHHEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure ASPQIKRASPAFEPAKKTATVKTVKAVRRTQEDRSRTTKEKLLAATIEVLLRDGYSGLT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH MKEVAKASGVSNGALMHHYANKAELVVEATAMVYEEAIVRGQRMAQTAGAAEKPIEGFIT HHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH DCLSVYFDWPFLAALESIVVARTDPDLMTRILPVMERYRVTCDDIWMGVFKKAGVPTKRA HHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHH RVLLNLSLNLVRGMGLNRLWRHDDAHYQIYLKEWITMANQQLAQLK HHHHHHHHHHHHCCCHHHHHCCCCCHHEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA