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The map label for this gene is nahR [H]

Identifier: 91786879

GI number: 91786879

Start: 997210

End: 998115

Strand: Reverse

Name: nahR [H]

Synonym: Bpro_0979

Alternate gene names: 91786879

Gene position: 998115-997210 (Counterclockwise)

Preceding gene: 91786892

Following gene: 91786877

Centisome position: 19.19

GC content: 55.96

Gene sequence:

>906_bases
ATGGAACTCCAGGACATCGACCTGAACTTGCTGGTCATCTTCAACCAGTTGTTGACGGAAAAAAAAGTCTCGAAAGTCGC
CGAGAACCTCGGCCTCGGGCAACCCGCTGTCAGCAACGCGCTGGCGCGCCTGCGCAAGCTTTTTGGCGACGAACTTTTCC
TGCGCACGTCCAGTGGCATGCAGCCCACGCCTTTCGCCGACCAGTTGGCCGAATCGATAGGCTACGCGCTGGGCATGATC
CACGGCGCGGTCAACGCCAGGAATTCATTCGACCCCGCCACCAGCAAGCGGACCTTCTCAATCGGGATGACCGACATCGG
CGAGATCTACTTCCTGCCCCTTTTGATGGAAAAGATCCAGAAGGTGGCGCCGGCCGTGTCGATCAGCACAGTACGTAATA
CCAGCACTAACCTGAAGGACTCCATGGAGGCAGGCCATATCGATCTGGCCATCGGATTGCTGCCCCAGCTCAAGGCCGGC
TTCTTCCAGCAGCGATTGTTCACTCAGCAATATGTCTGCATGTTCAGGCAGGGGCACCCGCTGGACAAGAAAAAAATCCT
GCCGTCAGATTTTTTTGCAGCGGACCATGTGGCGATTGTTTCGGCAGGTACAGGCCACGGGATAGTCGATGAAATACTGG
ACAAAAATTCACCACAGCGGAAGGTGAAGTTGACCGTACCGCATTTTGTGGCGGTGGGTCACATTCTCCAGTCAACGGAA
CTGGTGGCCACCGTGCCGGAACGCCTCGCAGAACGGATGGCCACACCTTTCAACCTGAAATACGTCGCACACCCCATCAA
GCTTCCGCAGATTGCCATCAATCTGTTCTGGCATGCCAAGTACCACAAAGACCCCGCCAATCAGTGGTTGCGGGGCCTCA
TCTTCAACATGCATGCAGATGGGTAG

Upstream 100 bases:

>100_bases
GTGATCTTCGGCCGCAGTGCATAATCAGTCAATACAATGACATCAATGTTTTACATCATTTAAATCAATAGTTACGCACA
GACGTAGATCGGAGACGCAG

Downstream 100 bases:

>100_bases
TCAGGGGTAGGCAGAGGGAGTCGGCTTCATGGCCGAGTAGGTGCATGGCGGGTTCTCCGTACTTCCCTGGAGGCCTTTCC
TTTAAACCTGTCTGTGAACC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MELQDIDLNLLVIFNQLLTEKKVSKVAENLGLGQPAVSNALARLRKLFGDELFLRTSSGMQPTPFADQLAESIGYALGMI
HGAVNARNSFDPATSKRTFSIGMTDIGEIYFLPLLMEKIQKVAPAVSISTVRNTSTNLKDSMEAGHIDLAIGLLPQLKAG
FFQQRLFTQQYVCMFRQGHPLDKKKILPSDFFAADHVAIVSAGTGHGIVDEILDKNSPQRKVKLTVPHFVAVGHILQSTE
LVATVPERLAERMATPFNLKYVAHPIKLPQIAINLFWHAKYHKDPANQWLRGLIFNMHADG

Sequences:

>Translated_301_residues
MELQDIDLNLLVIFNQLLTEKKVSKVAENLGLGQPAVSNALARLRKLFGDELFLRTSSGMQPTPFADQLAESIGYALGMI
HGAVNARNSFDPATSKRTFSIGMTDIGEIYFLPLLMEKIQKVAPAVSISTVRNTSTNLKDSMEAGHIDLAIGLLPQLKAG
FFQQRLFTQQYVCMFRQGHPLDKKKILPSDFFAADHVAIVSAGTGHGIVDEILDKNSPQRKVKLTVPHFVAVGHILQSTE
LVATVPERLAERMATPFNLKYVAHPIKLPQIAINLFWHAKYHKDPANQWLRGLIFNMHADG
>Mature_301_residues
MELQDIDLNLLVIFNQLLTEKKVSKVAENLGLGQPAVSNALARLRKLFGDELFLRTSSGMQPTPFADQLAESIGYALGMI
HGAVNARNSFDPATSKRTFSIGMTDIGEIYFLPLLMEKIQKVAPAVSISTVRNTSTNLKDSMEAGHIDLAIGLLPQLKAG
FFQQRLFTQQYVCMFRQGHPLDKKKILPSDFFAADHVAIVSAGTGHGIVDEILDKNSPQRKVKLTVPHFVAVGHILQSTE
LVATVPERLAERMATPFNLKYVAHPIKLPQIAINLFWHAKYHKDPANQWLRGLIFNMHADG

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=290, Percent_Identity=28.2758620689655, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI87081766, Length=289, Percent_Identity=25.2595155709343, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1789204, Length=221, Percent_Identity=26.6968325791855, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1790147, Length=301, Percent_Identity=22.9235880398671, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1786820, Length=303, Percent_Identity=24.0924092409241, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33378; Mature: 33378

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELQDIDLNLLVIFNQLLTEKKVSKVAENLGLGQPAVSNALARLRKLFGDELFLRTSSGM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCC
QPTPFADQLAESIGYALGMIHGAVNARNSFDPATSKRTFSIGMTDIGEIYFLPLLMEKIQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
KVAPAVSISTVRNTSTNLKDSMEAGHIDLAIGLLPQLKAGFFQQRLFTQQYVCMFRQGHP
HHCCCHHHHHHHCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LDKKKILPSDFFAADHVAIVSAGTGHGIVDEILDKNSPQRKVKLTVPHFVAVGHILQSTE
CCHHCCCCCHHHCCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHH
LVATVPERLAERMATPFNLKYVAHPIKLPQIAINLFWHAKYHKDPANQWLRGLIFNMHAD
HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHEEHHHCCCHHHHHHHHHHHHCCCC
G
C
>Mature Secondary Structure
MELQDIDLNLLVIFNQLLTEKKVSKVAENLGLGQPAVSNALARLRKLFGDELFLRTSSGM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCC
QPTPFADQLAESIGYALGMIHGAVNARNSFDPATSKRTFSIGMTDIGEIYFLPLLMEKIQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
KVAPAVSISTVRNTSTNLKDSMEAGHIDLAIGLLPQLKAGFFQQRLFTQQYVCMFRQGHP
HHCCCHHHHHHHCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LDKKKILPSDFFAADHVAIVSAGTGHGIVDEILDKNSPQRKVKLTVPHFVAVGHILQSTE
CCHHCCCCCHHHCCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHH
LVATVPERLAERMATPFNLKYVAHPIKLPQIAINLFWHAKYHKDPANQWLRGLIFNMHAD
HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHEEHHHCCCHHHHHHHHHHHHCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]