| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786859
Identifier: 91786859
GI number: 91786859
Start: 980567
End: 980884
Strand: Reverse
Name: 91786859
Synonym: Bpro_0957
Alternate gene names: NA
Gene position: 980884-980567 (Counterclockwise)
Preceding gene: 91786860
Following gene: 91786858
Centisome position: 18.86
GC content: 58.49
Gene sequence:
>318_bases ATGGAACTGGACGATCCGAAACTGCGAGACTCGAAATCGCCGGTAACCCTGGGCTTGTTGGTCAAAGTGGCCGAGATGCT CACGGCGAAGCTGAAAGAGCAGCACGAAGCCTTCAAAGTGCTGAGCGCGCGCCTGATCGAAATCGAGAAGCAGCCCTTCA GCTATGACGGCCCGCACGAAACCGGCAAGGTTTACGACAAGGGGCGATTCGTCACGCACGACGGCTCTCTATGGCATTGC AATTACAAAACGGCCTGCCGCCCTGGTGATGGCCCTGCTTGGACGCTGGCGGTGAAGCGTGGGAGGGACGCGAAATGA
Upstream 100 bases:
>100_bases CCGAGTCCACCGGGATCAAGGCAGAGCGACACATCGAGTGGGAGCTTGGCCGGCCAGGTGCAGCCGTGGTCATCACCCAT GTTCCCTATGGAGCGAACTG
Downstream 100 bases:
>100_bases ACGCATTGACAGATAACGACCTGGCCGAGTTCGTTCGCCATTTTCGAAACGGCCTGGGCCTATGCGATGTTGTCGCACCG ATTGACGTGATCGGCCTGCA
Product: carbohydrate-binding family V/XII protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MELDDPKLRDSKSPVTLGLLVKVAEMLTAKLKEQHEAFKVLSARLIEIEKQPFSYDGPHETGKVYDKGRFVTHDGSLWHC NYKTACRPGDGPAWTLAVKRGRDAK
Sequences:
>Translated_105_residues MELDDPKLRDSKSPVTLGLLVKVAEMLTAKLKEQHEAFKVLSARLIEIEKQPFSYDGPHETGKVYDKGRFVTHDGSLWHC NYKTACRPGDGPAWTLAVKRGRDAK >Mature_105_residues MELDDPKLRDSKSPVTLGLLVKVAEMLTAKLKEQHEAFKVLSARLIEIEKQPFSYDGPHETGKVYDKGRFVTHDGSLWHC NYKTACRPGDGPAWTLAVKRGRDAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11824; Mature: 11824
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELDDPKLRDSKSPVTLGLLVKVAEMLTAKLKEQHEAFKVLSARLIEIEKQPFSYDGPHE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TGKVYDKGRFVTHDGSLWHCNYKTACRPGDGPAWTLAVKRGRDAK CCCEECCCEEEECCCCEEEECCCCCCCCCCCCEEEEEEECCCCCC >Mature Secondary Structure MELDDPKLRDSKSPVTLGLLVKVAEMLTAKLKEQHEAFKVLSARLIEIEKQPFSYDGPHE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TGKVYDKGRFVTHDGSLWHCNYKTACRPGDGPAWTLAVKRGRDAK CCCEECCCEEEECCCCEEEECCCCCCCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA