Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786858

Identifier: 91786858

GI number: 91786858

Start: 978994

End: 979977

Strand: Reverse

Name: 91786858

Synonym: Bpro_0956

Alternate gene names: NA

Gene position: 979977-978994 (Counterclockwise)

Preceding gene: 91786859

Following gene: 91786857

Centisome position: 18.84

GC content: 54.78

Gene sequence:

>984_bases
ATGGCTACCGCTAATACACCTATGCGCGGGCTTTTTAAGAAGCTTGACTCGGCAGGCATACCCCCCGCATTCGCCAAAAA
AATGTTGCCTGCTTGGTGGGAGGATGAGGTTGCCTCCGACCCGGCTGGGCTCCAACAAGCCCAGCTCTACTTGTCCCGTG
CATTCAATATTGAGCTGCAAAGCTTGGCCGATGAGGGTTCCCCGCCCGCATTCCGTGCCAGCTTGCGGAAGTTCAAGCTC
AGCCGGAACGTCTCGGAAGACACCGTTTCCGTCAGTGCAAATTACGCAACTGGCATCTCTCGGTTGGCGTTGCAGGCTTA
TCGGCTCGAACAGAAGCAGGTTCCGGTCAATCCGTCGGACTTGCGCAAGGTCATTCTTGTTAAGCACCAGTGTGTGAGCC
TAATTTCTCTGTTGGAGTGGTGCATCAGCGCAGGTATCCCCGTCCTTCATATTGAAAAGCTTCCGGGCAAGAAGATGACG
GGATTAGTGGTGCGAGACGGTGGCCGTTTCGCAATCGTCCTGAGCAAGAGGGGGCACCCTGCACACTTGCTTTTCCATCT
GGCGCACGAACTTGGGCATATCGCAAAGAACCACCTGGCACAAGATGGTTTTGTAGCCGACGAGAAGATCGATAGCAGCA
GCGGCGATGCAGACGAGAAGGAAGCCGACGCATACGCGATCTGCCTTTTGAATGGTTCTGACATTCGCTACCGTGCTGGC
GGCGTTATCAAGAGCGGGCATGTTTTGCACAAGGCTGCGGTTGCCAAGGGCAAGGAAATGCGCGTTGATGCCGGACATAT
CATCGCGAATTTTGGGCATAACCAAGATCGTTACGCGATGGCTGCAATCGCTCTGGCCGACTTGGGCGAGCCTTCGCAGG
GCAACGCCGTGATCAATGGGGCATTTTTCCGAGCGATTGACCGCGATTTGGTTTCAGAGGATCAGCTAGATCTCTTGAAG
GTCGCTACTGGCTATACCGATTAG

Upstream 100 bases:

>100_bases
CATCCAACCTCCAATACTGCTATAAAGCGCAAGTGGCTACAATATATGGTTAACCTGAGCATCGCGGAACACCCGCAGGC
CAAGGACGATCTACCGAAAC

Downstream 100 bases:

>100_bases
CGTTCCGTAGGCCCGATGATAATTCTGTCGGACACCGATGTCGTCCATAAGCTCGCCTGCTGCGAGTTGCTTCTCGAATT
CCTTCAGTACCTGCAATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MATANTPMRGLFKKLDSAGIPPAFAKKMLPAWWEDEVASDPAGLQQAQLYLSRAFNIELQSLADEGSPPAFRASLRKFKL
SRNVSEDTVSVSANYATGISRLALQAYRLEQKQVPVNPSDLRKVILVKHQCVSLISLLEWCISAGIPVLHIEKLPGKKMT
GLVVRDGGRFAIVLSKRGHPAHLLFHLAHELGHIAKNHLAQDGFVADEKIDSSSGDADEKEADAYAICLLNGSDIRYRAG
GVIKSGHVLHKAAVAKGKEMRVDAGHIIANFGHNQDRYAMAAIALADLGEPSQGNAVINGAFFRAIDRDLVSEDQLDLLK
VATGYTD

Sequences:

>Translated_327_residues
MATANTPMRGLFKKLDSAGIPPAFAKKMLPAWWEDEVASDPAGLQQAQLYLSRAFNIELQSLADEGSPPAFRASLRKFKL
SRNVSEDTVSVSANYATGISRLALQAYRLEQKQVPVNPSDLRKVILVKHQCVSLISLLEWCISAGIPVLHIEKLPGKKMT
GLVVRDGGRFAIVLSKRGHPAHLLFHLAHELGHIAKNHLAQDGFVADEKIDSSSGDADEKEADAYAICLLNGSDIRYRAG
GVIKSGHVLHKAAVAKGKEMRVDAGHIIANFGHNQDRYAMAAIALADLGEPSQGNAVINGAFFRAIDRDLVSEDQLDLLK
VATGYTD
>Mature_326_residues
ATANTPMRGLFKKLDSAGIPPAFAKKMLPAWWEDEVASDPAGLQQAQLYLSRAFNIELQSLADEGSPPAFRASLRKFKLS
RNVSEDTVSVSANYATGISRLALQAYRLEQKQVPVNPSDLRKVILVKHQCVSLISLLEWCISAGIPVLHIEKLPGKKMTG
LVVRDGGRFAIVLSKRGHPAHLLFHLAHELGHIAKNHLAQDGFVADEKIDSSSGDADEKEADAYAICLLNGSDIRYRAGG
VIKSGHVLHKAAVAKGKEMRVDAGHIIANFGHNQDRYAMAAIALADLGEPSQGNAVINGAFFRAIDRDLVSEDQLDLLKV
ATGYTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35450; Mature: 35319

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATANTPMRGLFKKLDSAGIPPAFAKKMLPAWWEDEVASDPAGLQQAQLYLSRAFNIELQ
CCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCHH
SLADEGSPPAFRASLRKFKLSRNVSEDTVSVSANYATGISRLALQAYRLEQKQVPVNPSD
HHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHH
LRKVILVKHQCVSLISLLEWCISAGIPVLHIEKLPGKKMTGLVVRDGGRFAIVLSKRGHP
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCEEEEEEECCCCH
AHLLFHLAHELGHIAKNHLAQDGFVADEKIDSSSGDADEKEADAYAICLLNGSDIRYRAG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEECC
GVIKSGHVLHKAAVAKGKEMRVDAGHIIANFGHNQDRYAMAAIALADLGEPSQGNAVING
CEEECCCHHHHHHHHCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEH
AFFRAIDRDLVSEDQLDLLKVATGYTD
HHHHHHHHHHHCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
ATANTPMRGLFKKLDSAGIPPAFAKKMLPAWWEDEVASDPAGLQQAQLYLSRAFNIELQ
CCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCHH
SLADEGSPPAFRASLRKFKLSRNVSEDTVSVSANYATGISRLALQAYRLEQKQVPVNPSD
HHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHH
LRKVILVKHQCVSLISLLEWCISAGIPVLHIEKLPGKKMTGLVVRDGGRFAIVLSKRGHP
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCEEEEEEECCCCH
AHLLFHLAHELGHIAKNHLAQDGFVADEKIDSSSGDADEKEADAYAICLLNGSDIRYRAG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEECC
GVIKSGHVLHKAAVAKGKEMRVDAGHIIANFGHNQDRYAMAAIALADLGEPSQGNAVING
CEEECCCHHHHHHHHCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEH
AFFRAIDRDLVSEDQLDLLKVATGYTD
HHHHHHHHHHHCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA