The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is obgE [H]

Identifier: 91786739

GI number: 91786739

Start: 860125

End: 861210

Strand: Reverse

Name: obgE [H]

Synonym: Bpro_0837

Alternate gene names: 91786739

Gene position: 861210-860125 (Counterclockwise)

Preceding gene: 91786740

Following gene: 91786738

Centisome position: 16.56

GC content: 62.52

Gene sequence:

>1086_bases
ATGAAATTTGTTGACGAAGCCTTTATTGACATTGCCGCCGGCGATGGCGGGAGTGGCTGCGTCTCGTTCAGCCACGAAAA
GTACAAAGAGTTCGGCGGCCCGAACGGCGGCGACGGCGGGCGCGGCGGCCATGTGTACGCGGTGGCGGATGTCAACCTCA
ACACGCTGGTGGATTTCCGCTTTTCGCGGCGCCACGAGGCCCGCAACGGCCAGCACGGCATGGGCTCGGACATGTTCGGC
GCCAAAGGCGATGACATCATCCTGAAGATGCCGGTGGGCACCATCCTGACCGACGCCGAGACCGGCGAGGTCCTTTTTGA
GCTGCTGGTGCCGGGCGAGCAGGTCCTGATCGCCAAGGGCGGAGACGGCGGTTTCGGCAACCTGCGCTTCAAAAGCTCGA
CCAACCGCGCGCCCCGCAGCAAAACGCCTGGCTGGCCCGGCGAGCGAAAAAACCTCAAACTGGAGCTCAAGGTACTGGCC
GACGTGGGCCTGCTCGGCATGCCCAATGCCGGAAAATCCACCTTTATTTCGGCAGTCTCCAACGCCCGCCCCCGCATCGC
CGACTACCCTTTCACCACGCTTCACCCCAACCTGGGCGTGGTGCGGGTGGGACCCGAGCAAAGCTTTGTGGTGGCCGACC
TGCCCGGCCTGATTGAAGGTGCCTCCGAAGGTGCTGGCCTGGGACATCTCTTCCTTCGGCACCTGCAGCGCACCCGGCTG
CTGCTGCACATCGTGGACCTGGCGCCTTTTGACGAAGGCGTGGACCCGGTGGCGCAGGCCAAAGCCATCGTGCGCGAGCT
CAAGAAATACGACGAAGCGCTCTACGAAAAGCCGCGCTGGCTGGTGCTGAACAAGCTCGACATGGTGGACGCAGACAAGC
GCGCAGCCATCGTCAAGGATTTCGTCAAACGCTTCAAGTTCAAGGGCCCTGTGTTCGAGATTTCGGCACTCACGCGCGAA
GGCTGCGAACACCTGATCAAGACGATCTACCAGCACGTCAAGCAGGTCCAGAAAAGCGAGCAACCCGTGGAAGAAGTCGA
CCCGCGCTTTGTCCCGCTGCCTCCGGAATCGCCTGAGACGCCCTGA

Upstream 100 bases:

>100_bases
TCACTTCGACTGAAACGAAGCCCCGACTTGTCGGGGCTTTTTTGTTTGTAAACTTGATCTCCGGCCTCTAACGTACCTGT
TTTAACCGCAGCATTCCATC

Downstream 100 bases:

>100_bases
CCCTTCGTTTTTTTTTGCCAAATCCGCAGCAAGTGCGGAAGTGGCGATTGCTACATATATGATAGCTTCTTACCCTCGTA
TTCATTGGACTAGAGCCTGA

Product: GTPase ObgE

Products: NA

Alternate protein names: GTP-binding protein obg [H]

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKFVDEAFIDIAAGDGGSGCVSFSHEKYKEFGGPNGGDGGRGGHVYAVADVNLNTLVDFRFSRRHEARNGQHGMGSDMFG
AKGDDIILKMPVGTILTDAETGEVLFELLVPGEQVLIAKGGDGGFGNLRFKSSTNRAPRSKTPGWPGERKNLKLELKVLA
DVGLLGMPNAGKSTFISAVSNARPRIADYPFTTLHPNLGVVRVGPEQSFVVADLPGLIEGASEGAGLGHLFLRHLQRTRL
LLHIVDLAPFDEGVDPVAQAKAIVRELKKYDEALYEKPRWLVLNKLDMVDADKRAAIVKDFVKRFKFKGPVFEISALTRE
GCEHLIKTIYQHVKQVQKSEQPVEEVDPRFVPLPPESPETP

Sequences:

>Translated_361_residues
MKFVDEAFIDIAAGDGGSGCVSFSHEKYKEFGGPNGGDGGRGGHVYAVADVNLNTLVDFRFSRRHEARNGQHGMGSDMFG
AKGDDIILKMPVGTILTDAETGEVLFELLVPGEQVLIAKGGDGGFGNLRFKSSTNRAPRSKTPGWPGERKNLKLELKVLA
DVGLLGMPNAGKSTFISAVSNARPRIADYPFTTLHPNLGVVRVGPEQSFVVADLPGLIEGASEGAGLGHLFLRHLQRTRL
LLHIVDLAPFDEGVDPVAQAKAIVRELKKYDEALYEKPRWLVLNKLDMVDADKRAAIVKDFVKRFKFKGPVFEISALTRE
GCEHLIKTIYQHVKQVQKSEQPVEEVDPRFVPLPPESPETP
>Mature_361_residues
MKFVDEAFIDIAAGDGGSGCVSFSHEKYKEFGGPNGGDGGRGGHVYAVADVNLNTLVDFRFSRRHEARNGQHGMGSDMFG
AKGDDIILKMPVGTILTDAETGEVLFELLVPGEQVLIAKGGDGGFGNLRFKSSTNRAPRSKTPGWPGERKNLKLELKVLA
DVGLLGMPNAGKSTFISAVSNARPRIADYPFTTLHPNLGVVRVGPEQSFVVADLPGLIEGASEGAGLGHLFLRHLQRTRL
LLHIVDLAPFDEGVDPVAQAKAIVRELKKYDEALYEKPRWLVLNKLDMVDADKRAAIVKDFVKRFKFKGPVFEISALTRE
GCEHLIKTIYQHVKQVQKSEQPVEEVDPRFVPLPPESPETP

Specific function: An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. It may play a role in control of the cell cycle, stress response, ribosome biogenesis and in t

COG id: COG0536

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI24308117, Length=331, Percent_Identity=40.1812688821752, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI111955139, Length=362, Percent_Identity=36.1878453038674, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI111955063, Length=195, Percent_Identity=39.4871794871795, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI58761500, Length=136, Percent_Identity=30.8823529411765, Blast_Score=73, Evalue=4e-13,
Organism=Escherichia coli, GI1789574, Length=347, Percent_Identity=53.314121037464, Blast_Score=327, Evalue=9e-91,
Organism=Escherichia coli, GI1787454, Length=158, Percent_Identity=31.0126582278481, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17552324, Length=312, Percent_Identity=30.7692307692308, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI17508313, Length=332, Percent_Identity=35.8433734939759, Blast_Score=140, Evalue=7e-34,
Organism=Caenorhabditis elegans, GI17509631, Length=139, Percent_Identity=33.0935251798561, Blast_Score=74, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6321962, Length=174, Percent_Identity=39.0804597701149, Blast_Score=121, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24585318, Length=270, Percent_Identity=39.2592592592593, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI20129375, Length=342, Percent_Identity=34.7953216374269, Blast_Score=141, Evalue=6e-34,
Organism=Drosophila melanogaster, GI24640873, Length=148, Percent_Identity=31.7567567567568, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24640877, Length=148, Percent_Identity=31.7567567567568, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24640875, Length=148, Percent_Identity=31.7567567567568, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014100
- InterPro:   IPR006074
- InterPro:   IPR006073
- InterPro:   IPR006169
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01018 GTP1_OBG; PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 39419; Mature: 39419

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS00905 GTP1_OBG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFVDEAFIDIAAGDGGSGCVSFSHEKYKEFGGPNGGDGGRGGHVYAVADVNLNTLVDFR
CCCHHCCCEEEECCCCCCCEEECCHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHEEHH
FSRRHEARNGQHGMGSDMFGAKGDDIILKMPVGTILTDAETGEVLFELLVPGEQVLIAKG
HHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHCCCCEEEEEEC
GDGGFGNLRFKSSTNRAPRSKTPGWPGERKNLKLELKVLADVGLLGMPNAGKSTFISAVS
CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHH
NARPRIADYPFTTLHPNLGVVRVGPEQSFVVADLPGLIEGASEGAGLGHLFLRHLQRTRL
CCCCCCCCCCCEEECCCCCEEEECCCCCEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHH
LLHIVDLAPFDEGVDPVAQAKAIVRELKKYDEALYEKPRWLVLNKLDMVDADKRAAIVKD
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHH
FVKRFKFKGPVFEISALTREGCEHLIKTIYQHVKQVQKSEQPVEEVDPRFVPLPPESPET
HHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEECCCCCCCC
P
C
>Mature Secondary Structure
MKFVDEAFIDIAAGDGGSGCVSFSHEKYKEFGGPNGGDGGRGGHVYAVADVNLNTLVDFR
CCCHHCCCEEEECCCCCCCEEECCHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHEEHH
FSRRHEARNGQHGMGSDMFGAKGDDIILKMPVGTILTDAETGEVLFELLVPGEQVLIAKG
HHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHCCCCEEEEEEC
GDGGFGNLRFKSSTNRAPRSKTPGWPGERKNLKLELKVLADVGLLGMPNAGKSTFISAVS
CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHH
NARPRIADYPFTTLHPNLGVVRVGPEQSFVVADLPGLIEGASEGAGLGHLFLRHLQRTRL
CCCCCCCCCCCEEECCCCCEEEECCCCCEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHH
LLHIVDLAPFDEGVDPVAQAKAIVRELKKYDEALYEKPRWLVLNKLDMVDADKRAAIVKD
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHH
FVKRFKFKGPVFEISALTREGCEHLIKTIYQHVKQVQKSEQPVEEVDPRFVPLPPESPET
HHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEECCCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA