The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786734

Identifier: 91786734

GI number: 91786734

Start: 855021

End: 855677

Strand: Reverse

Name: 91786734

Synonym: Bpro_0832

Alternate gene names: NA

Gene position: 855677-855021 (Counterclockwise)

Preceding gene: 91786735

Following gene: 91786728

Centisome position: 16.45

GC content: 61.95

Gene sequence:

>657_bases
GTGACAGCGCCCGGCATCGCGTCTGCAACGGCCCTCAGGCAATTTTCAAGAAGAAGGTGCCTGCAGTCCCTGTCTGCCGC
GTGCATTCCGTTCTTATTTTCAGAGCAGGCGAGCGCCGGCGCCCAGATTGAAGAGCCATTGATGGACTCGGTCCGATCGG
CACTGAGCTCGGCCGTCGCCAACCAGGCCCCCCCGGTGCCGGAGTTCAAGGACACCGAAAGCCGGCTGGCGTATCTGCGC
TGGCTGGGCGCCATGAGCGATCGCCTGAGAAAGAAAAACCCCGAGTGGCAAATCCGCAAGGAGTTCCTGCAAACCGCCTG
GTATGAGAGCAAACGCGCCGGGCTGGACGTCACGCTGGTCCTCGGCCTGATCCAGGTCGAAAGCAATTTCCGCAAGTTCG
CCGTGAGTAACGTGGGCGCGCGCGGTTACATGCAGGTCATGCCCTTCTGGACACGCGTGATTGGAGACGGCGATCCGTCC
AAGCTCTTTCACATGCAGACCAATTTGCGCTTCGGCTGCGTCATCCTTCGCCATTACCTGGACCGGGAACGCGGCGATCT
GTTCTTGGGCCTGGGCCGCTACAACGGCTCGCGCGGCAAGGCGCCCTACCCGAACGCGGTGATGGGTGCGAGCAAACAGT
GGGAATTCAGCGGCTGA

Upstream 100 bases:

>100_bases
TGAAAGAAGGCCAGCTTGAATACCAGCACCGGCGTGACGCCGCCTCCAGCAAGGTCGATGCAGCCACTGCGCTGGACTTT
CTCAAGGGGAAACTGGCCCT

Downstream 100 bases:

>100_bases
AACCGCTTTCGCGCATAAAACAAGCCAGAACCCGAATGAGCTCCCGGTTTACAGCTATCAATTAGAGAGCAAACCGGGTT
GGGCCGGCGACCAGCGCGTC

Product: lytic transglycosylase catalytic subunit

Products: NA

Alternate protein names: Transglycosylase SLT Domain Protein; Transglycosylase; Lytic Murein Transglycosylase; Twin-Arginine Translocation Pathway Signal; Soluble Lytic Murein Transglycosylase-Like; Lytic Transglycosylase; SLT Domain-Containing Protein; Signal Peptide Protein; Soluble Lytic Murein Transglycosylase

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTAPGIASATALRQFSRRRCLQSLSAACIPFLFSEQASAGAQIEEPLMDSVRSALSSAVANQAPPVPEFKDTESRLAYLR
WLGAMSDRLRKKNPEWQIRKEFLQTAWYESKRAGLDVTLVLGLIQVESNFRKFAVSNVGARGYMQVMPFWTRVIGDGDPS
KLFHMQTNLRFGCVILRHYLDRERGDLFLGLGRYNGSRGKAPYPNAVMGASKQWEFSG

Sequences:

>Translated_218_residues
MTAPGIASATALRQFSRRRCLQSLSAACIPFLFSEQASAGAQIEEPLMDSVRSALSSAVANQAPPVPEFKDTESRLAYLR
WLGAMSDRLRKKNPEWQIRKEFLQTAWYESKRAGLDVTLVLGLIQVESNFRKFAVSNVGARGYMQVMPFWTRVIGDGDPS
KLFHMQTNLRFGCVILRHYLDRERGDLFLGLGRYNGSRGKAPYPNAVMGASKQWEFSG
>Mature_217_residues
TAPGIASATALRQFSRRRCLQSLSAACIPFLFSEQASAGAQIEEPLMDSVRSALSSAVANQAPPVPEFKDTESRLAYLRW
LGAMSDRLRKKNPEWQIRKEFLQTAWYESKRAGLDVTLVLGLIQVESNFRKFAVSNVGARGYMQVMPFWTRVIGDGDPSK
LFHMQTNLRFGCVILRHYLDRERGDLFLGLGRYNGSRGKAPYPNAVMGASKQWEFSG

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24458; Mature: 24327

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPGIASATALRQFSRRRCLQSLSAACIPFLFSEQASAGAQIEEPLMDSVRSALSSAVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
NQAPPVPEFKDTESRLAYLRWLGAMSDRLRKKNPEWQIRKEFLQTAWYESKRAGLDVTLV
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
LGLIQVESNFRKFAVSNVGARGYMQVMPFWTRVIGDGDPSKLFHMQTNLRFGCVILRHYL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHEEEHHCCCHHHHHHHHHHH
DRERGDLFLGLGRYNGSRGKAPYPNAVMGASKQWEFSG
CCCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure 
TAPGIASATALRQFSRRRCLQSLSAACIPFLFSEQASAGAQIEEPLMDSVRSALSSAVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
NQAPPVPEFKDTESRLAYLRWLGAMSDRLRKKNPEWQIRKEFLQTAWYESKRAGLDVTLV
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
LGLIQVESNFRKFAVSNVGARGYMQVMPFWTRVIGDGDPSKLFHMQTNLRFGCVILRHYL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHEEEHHCCCHHHHHHHHHHH
DRERGDLFLGLGRYNGSRGKAPYPNAVMGASKQWEFSG
CCCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA