| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is mscL [H]
Identifier: 91786722
GI number: 91786722
Start: 842733
End: 843188
Strand: Reverse
Name: mscL [H]
Synonym: Bpro_0820
Alternate gene names: 91786722
Gene position: 843188-842733 (Counterclockwise)
Preceding gene: 91786728
Following gene: 91786719
Centisome position: 16.21
GC content: 57.02
Gene sequence:
>456_bases ATGATTCACCAACAACAGGAGTTGCACATGGGAATGATGCAGGAATTCAGGGAATTTGCGGTCAAGGGCAATGTGATCGA TCTGGCAGTGGGCGTGATCATAGGCGCGGCGTTCAGCAAGATTGTCGAATCCGTGGTGGGTGACCTGATCATGCCGGTCG TGGGTGCCGTGGTAGGCAAGCTGGATTTTTCCAACCTGTTTGTGGTGATGGGCAGCGTGCCGCCGGGCACCGCCATGACG CTGGACGCCCTGAAAAAGGCCGGCGTACCGGTGCTTGCCTATGGCAACTTCATCACCGTCGCCGTCAACTTTGCCATCCT GGCCTTCATCATTTTCCTGATGATCAAGCAGATCAACCGGCTCAAACGCCGCCAGGAGACCCAGCCTGCGGCGCCCGCAA CACCACCCGAAGACGTCATGCTGCTGCGCGAAATTCGCGACAGCCTGAAGAAATAA
Upstream 100 bases:
>100_bases GCAGGGCGAGCGCTCTTTCAGGCCAATCGCAAGATACCGCGTCGAGCATCCGATCCAGCCTTCATAATGACTTTTCGACA CTCACGAGGGGCGGTCAGCA
Downstream 100 bases:
>100_bases GCACCCCCCTGTGGCTCGCTCACTTCGTGTAGCGGGCCTCTCCCCTACAGGGGACGGCGCCTGCCGGCTGGCAAAGCCAG ACCGGCGCCCCCCGCTTGCG
Product: large-conductance mechanosensitive channel
Products: non-specific ion/solute [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MIHQQQELHMGMMQEFREFAVKGNVIDLAVGVIIGAAFSKIVESVVGDLIMPVVGAVVGKLDFSNLFVVMGSVPPGTAMT LDALKKAGVPVLAYGNFITVAVNFAILAFIIFLMIKQINRLKRRQETQPAAPATPPEDVMLLREIRDSLKK
Sequences:
>Translated_151_residues MIHQQQELHMGMMQEFREFAVKGNVIDLAVGVIIGAAFSKIVESVVGDLIMPVVGAVVGKLDFSNLFVVMGSVPPGTAMT LDALKKAGVPVLAYGNFITVAVNFAILAFIIFLMIKQINRLKRRQETQPAAPATPPEDVMLLREIRDSLKK >Mature_151_residues MIHQQQELHMGMMQEFREFAVKGNVIDLAVGVIIGAAFSKIVESVVGDLIMPVVGAVVGKLDFSNLFVVMGSVPPGTAMT LDALKKAGVPVLAYGNFITVAVNFAILAFIIFLMIKQINRLKRRQETQPAAPATPPEDVMLLREIRDSLKK
Specific function: Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell [H]
COG id: COG1970
COG function: function code M; Large-conductance mechanosensitive channel
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mscL family [H]
Homologues:
Organism=Escherichia coli, GI1789686, Length=143, Percent_Identity=50.3496503496504, Blast_Score=119, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019823 - InterPro: IPR001185 [H]
Pfam domain/function: PF01741 MscL [H]
EC number: NA
Molecular weight: Translated: 16464; Mature: 16464
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS01327 MSCL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHQQQELHMGMMQEFREFAVKGNVIDLAVGVIIGAAFSKIVESVVGDLIMPVVGAVVGK CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDFSNLFVVMGSVPPGTAMTLDALKKAGVPVLAYGNFITVAVNFAILAFIIFLMIKQINR CCHHHHEEEECCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH LKRRQETQPAAPATPPEDVMLLREIRDSLKK HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MIHQQQELHMGMMQEFREFAVKGNVIDLAVGVIIGAAFSKIVESVVGDLIMPVVGAVVGK CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDFSNLFVVMGSVPPGTAMTLDALKKAGVPVLAYGNFITVAVNFAILAFIIFLMIKQINR CCHHHHEEEECCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH LKRRQETQPAAPATPPEDVMLLREIRDSLKK HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: non-specific ion/solute [Cytoplasm] [C]
Specific reaction: non-specific ion/solute [Cytoplasm] = non-specific ion/solute [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA