| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is engB
Identifier: 91786673
GI number: 91786673
Start: 791858
End: 792595
Strand: Reverse
Name: engB
Synonym: Bpro_0771
Alternate gene names: 91786673
Gene position: 792595-791858 (Counterclockwise)
Preceding gene: 91786679
Following gene: 91786672
Centisome position: 15.24
GC content: 64.36
Gene sequence:
>738_bases ATGACTTCATCCTCACCCGCCCGTCCGCCAGTTGCCGCCGCCTCAACCCCGTCCGATGCCAAGGTCGCCCTGGGCTGGCT GCACACGGCCAAATTCCTCACCACGGCCCCCGAGCTCAAGCACCTGCCCCGGCTGGATGTGCCTGAGATCGCTTTTGTGG GCCGTTCCAACGCCGGCAAATCGACCTGCATCAACACGCTGACGCAGCAGCACCGCCTGGCCTTTGCCTCCAAGACACCG GGCCGCACGCAAAGCATCAACCTGTTCTCGCTGGGCAAGCAGGGCGTGACGGACGCGGTGCTGGCCGACTTGCCGGGCTA CGGCTATGCGGCGGTGCCCAAGGAGGCCAAATACCGCTGGCAACAGGTGATGGGCAACTACCTGCAGACGCGCGACAACC TGAAGGCCGTGGTATTGCTGTGCGACCCACGGCTGGGACTGACAGAGCTCGACGAAATCCTGCTCGACGTGCTTCGCCCC CGGGTCGAGGAAGGGCTGAAGTTCCTGGTGCTGCTGACCAAGTCGGACAAACTGAACAAGACCGAAGCCGCCAAGGCGCT GTCCATTGTGCGACTGCAGGCGGGCGGCGGAGACGTCAAACTCTTCTCTTCGCTGAAGCGCAAGGGCGTGGAAGAGGTGG CCCAGCATTTGTGGGACTGGGCCCACCCGCCGGAAAAGCCGGCCAAAAAGCCAAAGGCCGAACCGGCCGCCGAAGCTGCC ACAGGCGACGAGGGCTAA
Upstream 100 bases:
>100_bases GCCCCCTTTGCCTCTGGCCACCGACCTGCTGGCTGACGCCCCTTCACCGCATGCCAAGGCGCGCCCCCGCATGCAAACGT CCTCGAAGGACTGCCCGATC
Downstream 100 bases:
>100_bases TCCCGCCCCCGCCGCCCTGACGGCCGGCCCGCAACGCTAAAGCTTCGAGCAAAAATGCTTGCGCCCGAGATATGACGGGA GCAAGCAGCTATTGAAAGCA
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MTSSSPARPPVAAASTPSDAKVALGWLHTAKFLTTAPELKHLPRLDVPEIAFVGRSNAGKSTCINTLTQQHRLAFASKTP GRTQSINLFSLGKQGVTDAVLADLPGYGYAAVPKEAKYRWQQVMGNYLQTRDNLKAVVLLCDPRLGLTELDEILLDVLRP RVEEGLKFLVLLTKSDKLNKTEAAKALSIVRLQAGGGDVKLFSSLKRKGVEEVAQHLWDWAHPPEKPAKKPKAEPAAEAA TGDEG
Sequences:
>Translated_245_residues MTSSSPARPPVAAASTPSDAKVALGWLHTAKFLTTAPELKHLPRLDVPEIAFVGRSNAGKSTCINTLTQQHRLAFASKTP GRTQSINLFSLGKQGVTDAVLADLPGYGYAAVPKEAKYRWQQVMGNYLQTRDNLKAVVLLCDPRLGLTELDEILLDVLRP RVEEGLKFLVLLTKSDKLNKTEAAKALSIVRLQAGGGDVKLFSSLKRKGVEEVAQHLWDWAHPPEKPAKKPKAEPAAEAA TGDEG >Mature_244_residues TSSSPARPPVAAASTPSDAKVALGWLHTAKFLTTAPELKHLPRLDVPEIAFVGRSNAGKSTCINTLTQQHRLAFASKTPG RTQSINLFSLGKQGVTDAVLADLPGYGYAAVPKEAKYRWQQVMGNYLQTRDNLKAVVLLCDPRLGLTELDEILLDVLRPR VEEGLKFLVLLTKSDKLNKTEAAKALSIVRLQAGGGDVKLFSSLKRKGVEEVAQHLWDWAHPPEKPAKKPKAEPAAEAAT GDEG
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=180, Percent_Identity=32.2222222222222, Blast_Score=86, Evalue=3e-17, Organism=Escherichia coli, GI145693205, Length=195, Percent_Identity=47.1794871794872, Blast_Score=160, Evalue=5e-41, Organism=Saccharomyces cerevisiae, GI6320543, Length=138, Percent_Identity=30.4347826086957, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_POLSJ (Q12FG5)
Other databases:
- EMBL: CP000316 - RefSeq: YP_547625.1 - ProteinModelPortal: Q12FG5 - SMR: Q12FG5 - STRING: Q12FG5 - GeneID: 4011192 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_0771 - NMPDR: fig|296591.1.peg.3162 - eggNOG: COG0218 - HOGENOM: HBG447097 - OMA: FSLGKQG - PhylomeDB: Q12FG5 - ProtClustDB: PRK00454 - BioCyc: PSP296591:BPRO_0771-MONOMER - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 26508; Mature: 26377
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSSPARPPVAAASTPSDAKVALGWLHTAKFLTTAPELKHLPRLDVPEIAFVGRSNAGK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEECCCCCCH STCINTLTQQHRLAFASKTPGRTQSINLFSLGKQGVTDAVLADLPGYGYAAVPKEAKYRW HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHH QQVMGNYLQTRDNLKAVVLLCDPRLGLTELDEILLDVLRPRVEEGLKFLVLLTKSDKLNK HHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCH TEAAKALSIVRLQAGGGDVKLFSSLKRKGVEEVAQHLWDWAHPPEKPAKKPKAEPAAEAA HHHHHHHHHEEEECCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCC TGDEG CCCCC >Mature Secondary Structure TSSSPARPPVAAASTPSDAKVALGWLHTAKFLTTAPELKHLPRLDVPEIAFVGRSNAGK CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEECCCCCCH STCINTLTQQHRLAFASKTPGRTQSINLFSLGKQGVTDAVLADLPGYGYAAVPKEAKYRW HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHH QQVMGNYLQTRDNLKAVVLLCDPRLGLTELDEILLDVLRPRVEEGLKFLVLLTKSDKLNK HHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCH TEAAKALSIVRLQAGGGDVKLFSSLKRKGVEEVAQHLWDWAHPPEKPAKKPKAEPAAEAA HHHHHHHHHEEEECCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCC TGDEG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA