| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786634
Identifier: 91786634
GI number: 91786634
Start: 746724
End: 747878
Strand: Reverse
Name: 91786634
Synonym: Bpro_0732
Alternate gene names: NA
Gene position: 747878-746724 (Counterclockwise)
Preceding gene: 91786637
Following gene: 91786624
Centisome position: 14.38
GC content: 65.45
Gene sequence:
>1155_bases TTGATCGACAGTGGAGCAACACCGCGACGCGCCAAGGCCCCGAAGCAGTCAAGCCTCGCGCGACTCAAGCGCCTGCTGGG CCCCCGCCCCGCGCCAGCCCCGGAATCCAGCCCGGGTACAGCCTCAAAAAACTGGCTGGGTCGGCGCTCTTCACCGGACC GGGTCAACCTGGCGCTTCAGGGCGGTGGTGCGCACGGGGCCTTCACCTGGGGCGTATTGGACGCGCTGCTCGAAGACCCG CGCGTCCAGTTCGAGGGCCTGAGCGGCAGCAGCGCCGGGGCCATGAATGCCGTGGTTTTTGCAGACGGCTGGATGAAGGG CCAGCGTGAGGGCGCGCGCCAGGGCCTGGCCGACTTCTGGGGCGAGGTCGGAAAGCAGATGCCCTGGGGCATGATGACCC AGGGACAGGGCGACGCCATCAGCCTGTCGCCGGCCAGCAAGATGCTGGCGAACTGGGCCGGGTATTTCTCGCCCTCGCAG CTCAACCCGCTGGAACTGAACCCCTTGCGCGACCTGCTCAACCGGCAGGTCGACTTCGAGCGCCTGCGTGCAGGCAGTCC GTTCAAGCTGTTCATTGGCACCACACAGGTGAACACCGGCAAGCTGCGCGTGTTTCGGGAACATGAACTCACGGCCGAGG TGTTGCTGGCCTCCGCCTGTCTGCCCAAGATCCATCACTCGGTGGAAATCGATGGCCAGCCGTATTGGGACGGCGGCTAC TCGGCCAATCCGGCAGTGTTTCCGCTGTTCTACGACTGCGAGTCACGCGATGTGTTGCTGGTCCTGCTGAGCCCGCTTGA GCGCGATGGCACGCCGCGCAGCGTGGAGGAGATCGAGGCACGCATTGTGGAGCTGGCGTTCAACGCCACCTTCATGCGCG AGATGCGCATGTTCGCCCATGCGACGGAGTTTGCAAGCCCGACCTTCCTGACCATGGGACGGCTGGAGCGGCGATTGCAG AAGATGCGCTTTCACATGGTCGACTCCGCCGAGCTGGTGAGCCTGCAGCGCAGCGAGACCAAGCTGCTGGCGCACGGCCC GTTTCTGGAACTGTTGCGGGACCAGGGGCGCGAACGGGCGGCGGCCTGGCTCTCGACGCACTACGAGGGTGTTGGACGAC GGTCAACGGTGGACGTGAAGAAGTGGTTCAGCTGA
Upstream 100 bases:
>100_bases CTTTTTTGCAAGGTCAAATGAGTTTGCGCTGTTTTATACGGGAAAACCCTATACTGAACCGACACCCACAGGGCATTTCG CCCGCCGGGAAGGAGTTCAT
Downstream 100 bases:
>100_bases GCCACGCTACAGCCCCGGCCGACACGGCAGTTCCCGCAGTGGTTCAGGCGCCGCGCCGCCAGGCGTCATAGCGTGCCCGG TTTTCCTCGTTCGGCGGGTA
Product: patatin
Products: NA
Alternate protein names: Patatin-Like Phospholipase; Alpha-Beta Hydrolase Family Esterase; Phospholipase Patatin Family; Patatin Family Phospholipase; Transmembrane Protein; Esterase Of Alpha-Beta Hydrolase Superfamily; Esterase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Serine Protease; Transmembrane Patatin-Like Phospholipase; Patatin-Like Phospholipase Domain-Containing Protein; FabD/Lysophospholipase-Like Esterase; FabD/Lysophospholipase-Like Protein; Alpha/Beta Hydrolase; Patatin-Like Phospholipase Family; FabD/Lysophospholipase; Dehydrogenase/Reductase; Alpha/Beta Fold Family Hydrolase; Phospholipase Patatin Family Protein; Phospholipase; Transpatatin- Like Phospholipase Domain-Containing Protein
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MIDSGATPRRAKAPKQSSLARLKRLLGPRPAPAPESSPGTASKNWLGRRSSPDRVNLALQGGGAHGAFTWGVLDALLEDP RVQFEGLSGSSAGAMNAVVFADGWMKGQREGARQGLADFWGEVGKQMPWGMMTQGQGDAISLSPASKMLANWAGYFSPSQ LNPLELNPLRDLLNRQVDFERLRAGSPFKLFIGTTQVNTGKLRVFREHELTAEVLLASACLPKIHHSVEIDGQPYWDGGY SANPAVFPLFYDCESRDVLLVLLSPLERDGTPRSVEEIEARIVELAFNATFMREMRMFAHATEFASPTFLTMGRLERRLQ KMRFHMVDSAELVSLQRSETKLLAHGPFLELLRDQGRERAAAWLSTHYEGVGRRSTVDVKKWFS
Sequences:
>Translated_384_residues MIDSGATPRRAKAPKQSSLARLKRLLGPRPAPAPESSPGTASKNWLGRRSSPDRVNLALQGGGAHGAFTWGVLDALLEDP RVQFEGLSGSSAGAMNAVVFADGWMKGQREGARQGLADFWGEVGKQMPWGMMTQGQGDAISLSPASKMLANWAGYFSPSQ LNPLELNPLRDLLNRQVDFERLRAGSPFKLFIGTTQVNTGKLRVFREHELTAEVLLASACLPKIHHSVEIDGQPYWDGGY SANPAVFPLFYDCESRDVLLVLLSPLERDGTPRSVEEIEARIVELAFNATFMREMRMFAHATEFASPTFLTMGRLERRLQ KMRFHMVDSAELVSLQRSETKLLAHGPFLELLRDQGRERAAAWLSTHYEGVGRRSTVDVKKWFS >Mature_384_residues MIDSGATPRRAKAPKQSSLARLKRLLGPRPAPAPESSPGTASKNWLGRRSSPDRVNLALQGGGAHGAFTWGVLDALLEDP RVQFEGLSGSSAGAMNAVVFADGWMKGQREGARQGLADFWGEVGKQMPWGMMTQGQGDAISLSPASKMLANWAGYFSPSQ LNPLELNPLRDLLNRQVDFERLRAGSPFKLFIGTTQVNTGKLRVFREHELTAEVLLASACLPKIHHSVEIDGQPYWDGGY SANPAVFPLFYDCESRDVLLVLLSPLERDGTPRSVEEIEARIVELAFNATFMREMRMFAHATEFASPTFLTMGRLERRLQ KMRFHMVDSAELVSLQRSETKLLAHGPFLELLRDQGRERAAAWLSTHYEGVGRRSTVDVKKWFS
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42582; Mature: 42582
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDSGATPRRAKAPKQSSLARLKRLLGPRPAPAPESSPGTASKNWLGRRSSPDRVNLALQ CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEEE GGGAHGAFTWGVLDALLEDPRVQFEGLSGSSAGAMNAVVFADGWMKGQREGARQGLADFW CCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH GEVGKQMPWGMMTQGQGDAISLSPASKMLANWAGYFSPSQLNPLELNPLRDLLNRQVDFE HHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHH RLRAGSPFKLFIGTTQVNTGKLRVFREHELTAEVLLASACLPKIHHSVEIDGQPYWDGGY HHCCCCCEEEEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCC SANPAVFPLFYDCESRDVLLVLLSPLERDGTPRSVEEIEARIVELAFNATFMREMRMFAH CCCCEEEEEEECCCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ATEFASPTFLTMGRLERRLQKMRFHMVDSAELVSLQRSETKLLAHGPFLELLRDQGRERA HHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCHHHHHHHHCCHHHH AAWLSTHYEGVGRRSTVDVKKWFS HHHHHHHHHCCCCCCEECHHHHCC >Mature Secondary Structure MIDSGATPRRAKAPKQSSLARLKRLLGPRPAPAPESSPGTASKNWLGRRSSPDRVNLALQ CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEEE GGGAHGAFTWGVLDALLEDPRVQFEGLSGSSAGAMNAVVFADGWMKGQREGARQGLADFW CCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH GEVGKQMPWGMMTQGQGDAISLSPASKMLANWAGYFSPSQLNPLELNPLRDLLNRQVDFE HHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHH RLRAGSPFKLFIGTTQVNTGKLRVFREHELTAEVLLASACLPKIHHSVEIDGQPYWDGGY HHCCCCCEEEEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCC SANPAVFPLFYDCESRDVLLVLLSPLERDGTPRSVEEIEARIVELAFNATFMREMRMFAH CCCCEEEEEEECCCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ATEFASPTFLTMGRLERRLQKMRFHMVDSAELVSLQRSETKLLAHGPFLELLRDQGRERA HHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCHHHHHHHHCCHHHH AAWLSTHYEGVGRRSTVDVKKWFS HHHHHHHHHCCCCCCEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA