| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is dlpA [H]
Identifier: 91786633
GI number: 91786633
Start: 745958
End: 746680
Strand: Direct
Name: dlpA [H]
Synonym: Bpro_0731
Alternate gene names: 91786633
Gene position: 745958-746680 (Clockwise)
Preceding gene: 91786632
Following gene: 91786635
Centisome position: 14.34
GC content: 69.16
Gene sequence:
>723_bases ATGCCACAGACCCCGGTCATCCCGCTGAACCCAGAAGTCATCGAAACACTCAAGCGCATCACCACCGCCACGCTGACCAC GGTCCTGCTCAAAAAGGGCCTGCGCAATGTCTGGATGCGCGGCACGCGCCCTCTGCGCCCGGACCAGCCGCGCCAGGTGG GGCGTGCCTTCACGCTGCGGTTTGTGCCGGCCCGTGAAGACTTGGCCACGCCGGCCTCGTGGGGCGCTCCGATTTCGACG CGCGCGGCCATCGAGGCCATGCCCGAGGGCGTGGTTGCGGTGGTGGGCGCCCTCGGCGTGACCGATGCCGGCATCTTCGG CGACATTCTCTGCGCCCGCATGCAAAAGCGCGGTGTGGCCGCGCTGGTGACCGATGGCGTGGTGCGCGACCTGTCGGGCG TGCTGGACACCGGCTTGCCTGTCTGGTGCCAGGGCACGGCCGCCCCCGCGTCGGTGGCGGGACTCACGTTTGTCAACTGG CAGGAGCCCGTGGGCTGCGGCGGTGTCGCAGTGTTCCCCAACGATGTGGTCGTTGTCGATACCGACGGCGCGGTGCTGAT TCCGGCAGCGCTGGTCGACGAGGTGGTCGAAGCGGCGGTGGAGCATGAACGCCTCGAGGAGTGGATCATGCAGCAGGTGA GCCAGGGCTCGCCGCTGCCCGGCCTGTACCCGCCGAACGAGGAAAACCGGGCACGCTATGACGCCTGGCGGCGCGGCGCC TGA
Upstream 100 bases:
>100_bases GAGTCATGGCGGGGGAGTGACGGCAGGAGCGTGACTCTGTGCGAGGTGCGCGCCGGGAATCCGGTGCATCATTGCTACAT CTACCTCCATGGAGTTTCCA
Downstream 100 bases:
>100_bases ACCACTGCGGGAACTGCCGTGTCGGCCGGGGCTGTAGCGTGGCTCAGCTGAACCACTTCTTCACGTCCACCGTTGACCGT CGTCCAACACCCTCGTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MPQTPVIPLNPEVIETLKRITTATLTTVLLKKGLRNVWMRGTRPLRPDQPRQVGRAFTLRFVPAREDLATPASWGAPIST RAAIEAMPEGVVAVVGALGVTDAGIFGDILCARMQKRGVAALVTDGVVRDLSGVLDTGLPVWCQGTAAPASVAGLTFVNW QEPVGCGGVAVFPNDVVVVDTDGAVLIPAALVDEVVEAAVEHERLEEWIMQQVSQGSPLPGLYPPNEENRARYDAWRRGA
Sequences:
>Translated_240_residues MPQTPVIPLNPEVIETLKRITTATLTTVLLKKGLRNVWMRGTRPLRPDQPRQVGRAFTLRFVPAREDLATPASWGAPIST RAAIEAMPEGVVAVVGALGVTDAGIFGDILCARMQKRGVAALVTDGVVRDLSGVLDTGLPVWCQGTAAPASVAGLTFVNW QEPVGCGGVAVFPNDVVVVDTDGAVLIPAALVDEVVEAAVEHERLEEWIMQQVSQGSPLPGLYPPNEENRARYDAWRRGA >Mature_239_residues PQTPVIPLNPEVIETLKRITTATLTTVLLKKGLRNVWMRGTRPLRPDQPRQVGRAFTLRFVPAREDLATPASWGAPISTR AAIEAMPEGVVAVVGALGVTDAGIFGDILCARMQKRGVAALVTDGVVRDLSGVLDTGLPVWCQGTAAPASVAGLTFVNWQ EPVGCGGVAVFPNDVVVVDTDGAVLIPAALVDEVVEAAVEHERLEEWIMQQVSQGSPLPGLYPPNEENRARYDAWRRGA
Specific function: Unknown
COG id: COG0684
COG function: function code H; Demethylmenaquinone methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0644 in the C-terminal section [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019818 - InterPro: IPR001804 - InterPro: IPR005493 [H]
Pfam domain/function: PF00180 Iso_dh; PF03737 Methyltransf_6 [H]
EC number: NA
Molecular weight: Translated: 25647; Mature: 25516
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQTPVIPLNPEVIETLKRITTATLTTVLLKKGLRNVWMRGTRPLRPDQPRQVGRAFTLR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEE FVPAREDLATPASWGAPISTRAAIEAMPEGVVAVVGALGVTDAGIFGDILCARMQKRGVA EECCHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCH ALVTDGVVRDLSGVLDTGLPVWCQGTAAPASVAGLTFVNWQEPVGCGGVAVFPNDVVVVD HHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHCEEEECCCCCCCCCCEEECCCCEEEEE TDGAVLIPAALVDEVVEAAVEHERLEEWIMQQVSQGSPLPGLYPPNEENRARYDAWRRGA CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure PQTPVIPLNPEVIETLKRITTATLTTVLLKKGLRNVWMRGTRPLRPDQPRQVGRAFTLR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEE FVPAREDLATPASWGAPISTRAAIEAMPEGVVAVVGALGVTDAGIFGDILCARMQKRGVA EECCHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCH ALVTDGVVRDLSGVLDTGLPVWCQGTAAPASVAGLTFVNWQEPVGCGGVAVFPNDVVVVD HHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHCEEEECCCCCCCCCCEEECCCCEEEEE TDGAVLIPAALVDEVVEAAVEHERLEEWIMQQVSQGSPLPGLYPPNEENRARYDAWRRGA CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7891566 [H]