Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91786632

Identifier: 91786632

GI number: 91786632

Start: 745308

End: 745655

Strand: Direct

Name: 91786632

Synonym: Bpro_0730

Alternate gene names: NA

Gene position: 745308-745655 (Clockwise)

Preceding gene: 91786631

Following gene: 91786633

Centisome position: 14.33

GC content: 61.21

Gene sequence:

>348_bases
TTGACCATGTCCTCCTCCCCATCGCCATCCTCATCGCCATCCTCCACCGGCCAGCAGCATCCGATCGGCCTGTACCTCAA
GGTCTGGGGTCTGCTCTTCGTGCTCAGCACCATGTCCTACCTGGTGGATTATTTCCACTTCCAGGGCTATCTGCGCTGGG
GCCTGATCCTGGTCTTCATGCTGCTCAAGGCAGGGCTCATCGTTGCGGTGTTCATGCACATGGCCTGGGAGCGGCTGGCA
CTGGTCTATGCCATCCTGGTTCCGCCGCTGGCCGTGCTGGTGCTGGTCGGCCTGATGGCTGCCGAGGCTGACCACACCTT
CCTCACCCGGTTGCTGTTTTTCCGCTAG

Upstream 100 bases:

>100_bases
AGATCGTGGAGATCGTCGGCCTGTACTGGCACTTCGTCGACCTCGTCTGGGTGTTCATCTTTGCGTTTTTCTATCTCTGG
TGACAGTCCCTGCTGAAAGC

Downstream 100 bases:

>100_bases
GGCCAATACTGTTCGGTTAAGTTATTCACCCTGAATCGGAATGAGCAAAACCTTGATTTGTCATTGCGGGCCTGACCCGC
AATCCATGGATCCCGGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: Small Integral Membrane Protein; Bb3-Type Cytochrome Oxidase Subunit IV; Cytochrome Oxidase Subunit IV; Integral Membrane Protein; Cytochrome Oxidase Subunit Iv

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MTMSSSPSPSSSPSSTGQQHPIGLYLKVWGLLFVLSTMSYLVDYFHFQGYLRWGLILVFMLLKAGLIVAVFMHMAWERLA
LVYAILVPPLAVLVLVGLMAAEADHTFLTRLLFFR

Sequences:

>Translated_115_residues
MTMSSSPSPSSSPSSTGQQHPIGLYLKVWGLLFVLSTMSYLVDYFHFQGYLRWGLILVFMLLKAGLIVAVFMHMAWERLA
LVYAILVPPLAVLVLVGLMAAEADHTFLTRLLFFR
>Mature_114_residues
TMSSSPSPSSSPSSTGQQHPIGLYLKVWGLLFVLSTMSYLVDYFHFQGYLRWGLILVFMLLKAGLIVAVFMHMAWERLAL
VYAILVPPLAVLVLVGLMAAEADHTFLTRLLFFR

Specific function: Unknown

COG id: COG5605

COG function: function code S; Predicted small integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12909; Mature: 12778

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS01309 UPF0057

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSSSPSPSSSPSSTGQQHPIGLYLKVWGLLFVLSTMSYLVDYFHFQGYLRWGLILVFM
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKAGLIVAVFMHMAWERLALVYAILVPPLAVLVLVGLMAAEADHTFLTRLLFFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
TMSSSPSPSSSPSSTGQQHPIGLYLKVWGLLFVLSTMSYLVDYFHFQGYLRWGLILVFM
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKAGLIVAVFMHMAWERLALVYAILVPPLAVLVLVGLMAAEADHTFLTRLLFFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA