| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786632
Identifier: 91786632
GI number: 91786632
Start: 745308
End: 745655
Strand: Direct
Name: 91786632
Synonym: Bpro_0730
Alternate gene names: NA
Gene position: 745308-745655 (Clockwise)
Preceding gene: 91786631
Following gene: 91786633
Centisome position: 14.33
GC content: 61.21
Gene sequence:
>348_bases TTGACCATGTCCTCCTCCCCATCGCCATCCTCATCGCCATCCTCCACCGGCCAGCAGCATCCGATCGGCCTGTACCTCAA GGTCTGGGGTCTGCTCTTCGTGCTCAGCACCATGTCCTACCTGGTGGATTATTTCCACTTCCAGGGCTATCTGCGCTGGG GCCTGATCCTGGTCTTCATGCTGCTCAAGGCAGGGCTCATCGTTGCGGTGTTCATGCACATGGCCTGGGAGCGGCTGGCA CTGGTCTATGCCATCCTGGTTCCGCCGCTGGCCGTGCTGGTGCTGGTCGGCCTGATGGCTGCCGAGGCTGACCACACCTT CCTCACCCGGTTGCTGTTTTTCCGCTAG
Upstream 100 bases:
>100_bases AGATCGTGGAGATCGTCGGCCTGTACTGGCACTTCGTCGACCTCGTCTGGGTGTTCATCTTTGCGTTTTTCTATCTCTGG TGACAGTCCCTGCTGAAAGC
Downstream 100 bases:
>100_bases GGCCAATACTGTTCGGTTAAGTTATTCACCCTGAATCGGAATGAGCAAAACCTTGATTTGTCATTGCGGGCCTGACCCGC AATCCATGGATCCCGGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: Small Integral Membrane Protein; Bb3-Type Cytochrome Oxidase Subunit IV; Cytochrome Oxidase Subunit IV; Integral Membrane Protein; Cytochrome Oxidase Subunit Iv
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MTMSSSPSPSSSPSSTGQQHPIGLYLKVWGLLFVLSTMSYLVDYFHFQGYLRWGLILVFMLLKAGLIVAVFMHMAWERLA LVYAILVPPLAVLVLVGLMAAEADHTFLTRLLFFR
Sequences:
>Translated_115_residues MTMSSSPSPSSSPSSTGQQHPIGLYLKVWGLLFVLSTMSYLVDYFHFQGYLRWGLILVFMLLKAGLIVAVFMHMAWERLA LVYAILVPPLAVLVLVGLMAAEADHTFLTRLLFFR >Mature_114_residues TMSSSPSPSSSPSSTGQQHPIGLYLKVWGLLFVLSTMSYLVDYFHFQGYLRWGLILVFMLLKAGLIVAVFMHMAWERLAL VYAILVPPLAVLVLVGLMAAEADHTFLTRLLFFR
Specific function: Unknown
COG id: COG5605
COG function: function code S; Predicted small integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12909; Mature: 12778
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS01309 UPF0057
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMSSSPSPSSSPSSTGQQHPIGLYLKVWGLLFVLSTMSYLVDYFHFQGYLRWGLILVFM CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKAGLIVAVFMHMAWERLALVYAILVPPLAVLVLVGLMAAEADHTFLTRLLFFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure TMSSSPSPSSSPSSTGQQHPIGLYLKVWGLLFVLSTMSYLVDYFHFQGYLRWGLILVFM CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKAGLIVAVFMHMAWERLALVYAILVPPLAVLVLVGLMAAEADHTFLTRLLFFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA