| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786603
Identifier: 91786603
GI number: 91786603
Start: 711494
End: 712825
Strand: Direct
Name: 91786603
Synonym: Bpro_0699
Alternate gene names: NA
Gene position: 711494-712825 (Clockwise)
Preceding gene: 91786598
Following gene: 91786604
Centisome position: 13.68
GC content: 61.34
Gene sequence:
>1332_bases ATGAGCAAAGCCAAATCAACCCTCTGGCGCCTGCTGGCCGGGGCCGCACTGGGATTGACAGCGCTGGGCGCAAGCGCGCA GGACAAGCAGCTGACCTTGTGCTGGGCCGCCTGGGACCCGGCCAACGCGCTGGTGGAACTGTCCAAGGACTTCACCGCCA AGACCGGTATCCAGATGAAGTACGAGTTCGTGCCGTGGCCGAACTTCGCGCAGCGCATGCTCAACGAGCTCAACTCCAGG GGCAAGCTGTGCGACCTGCTGATCGGCGACAGCCAGTGGATCGGCTCGGCCGCCACTGAGGGCCACTACGTCAAGCTCAA CGACTTCTTCGACAAGAACGCCATCAAGATGGGCGACTTCATGCCGGCCACGGTCGAGGGTTACTCGACCTGGCCCAAGG GCACGAAGAACTACTGGGCGCTGCCGGCCATGGGCGACGCGGTGGCCTTCACCTACCGCAAGGACTGGTTCGCCCGCCCC GAGTTGCAGGCCGAATTCAAGCAGAAGCACGGTCGCGAGCTGGCACCGCCCAAGACCTGGGACGAGTTCAAGCAGATCGG CCAGTTCTTCCAGAATCGTGTCATTGATGGCAAGAAGGTTTACGGCGCCGCGCTGTACACCGAGCGCGGCTCCGAAGGCA TCACGATGGGCGTGGCAAACACCATGTACGCCCATGGCATGGAGTACGACAACCCGAAGAAGCCATACGACATGAACGGC TACATCAACGGCCCCGGCGCCGTGAAGGGGCTGAAGTTCTACAAGGACCTCTACGACTGCTGCGTGCCGCCCGGCCACAG CAATGCCTACATGACCGAGGACCTGGACGCCTACAAGTCGGGCCAGGTGGCGATGCAGATGAACTTCATAGCCTTCTTCC CTGGTATCTCCAAGGACCCGCAGGTCGGCGGCGAGAAGACCGGCTTCTTCCCCATCCCCAAGGGTGACAAGCAACTCGCG CAACTCGGCGGTCAGGGTATCTCGGTGGTCAAGTACTCCGACAAGAAGGACATGGCGCTGCAGTACATGAAGTGGTTCGC GCAGCCTTCCATCCAGAAGAAGTGGTGGGATGGTGGTGGATTCACCTGCATGAAGTCCATTCTGGAAGCGCCCGGCTTCG AAACCAGCACGCCCTATGCCAAGGTGTTCCTTGACTCGATGAAGATCGTCAAGGACTTCTGGGCCGAGCCGAGCTACGCG CAGTTGATGCTGGCCATGCAGGCCCGCGTGCATGACTACGTGGTCGCCGGCAAGGGCACCCCCAACGCCGCGCTGGACGC GCTACTGAAGGACTGGGTCCAGGTGTTCAAGGAAGACGGGAAAATCAAGTGA
Upstream 100 bases:
>100_bases GCGGATGAGGCCGAAAAAACAAGCGGGCAGATGCACCCGAATCGCCGCTTCCATTTGCAACCCAAGCGTGGCCCGCCACG CACCGTAAGGAGACGAACAC
Downstream 100 bases:
>100_bases AATCCACGGAATTCACGCAATGGGTACCGCCGCAGGCGGCGGTACCCAGCGCCAATCTCCCGGAACCGGTGGGCTCCGCC CATCGGGCCGCCCCCGCCGC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: Sugar ABC Transporter Periplasmic Protein; Sugar ABC Transporter; Twin-Arginine Translocation Pathway Signal; Abc-Type Sugar Transport System Periplasmic Component
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MSKAKSTLWRLLAGAALGLTALGASAQDKQLTLCWAAWDPANALVELSKDFTAKTGIQMKYEFVPWPNFAQRMLNELNSR GKLCDLLIGDSQWIGSAATEGHYVKLNDFFDKNAIKMGDFMPATVEGYSTWPKGTKNYWALPAMGDAVAFTYRKDWFARP ELQAEFKQKHGRELAPPKTWDEFKQIGQFFQNRVIDGKKVYGAALYTERGSEGITMGVANTMYAHGMEYDNPKKPYDMNG YINGPGAVKGLKFYKDLYDCCVPPGHSNAYMTEDLDAYKSGQVAMQMNFIAFFPGISKDPQVGGEKTGFFPIPKGDKQLA QLGGQGISVVKYSDKKDMALQYMKWFAQPSIQKKWWDGGGFTCMKSILEAPGFETSTPYAKVFLDSMKIVKDFWAEPSYA QLMLAMQARVHDYVVAGKGTPNAALDALLKDWVQVFKEDGKIK
Sequences:
>Translated_443_residues MSKAKSTLWRLLAGAALGLTALGASAQDKQLTLCWAAWDPANALVELSKDFTAKTGIQMKYEFVPWPNFAQRMLNELNSR GKLCDLLIGDSQWIGSAATEGHYVKLNDFFDKNAIKMGDFMPATVEGYSTWPKGTKNYWALPAMGDAVAFTYRKDWFARP ELQAEFKQKHGRELAPPKTWDEFKQIGQFFQNRVIDGKKVYGAALYTERGSEGITMGVANTMYAHGMEYDNPKKPYDMNG YINGPGAVKGLKFYKDLYDCCVPPGHSNAYMTEDLDAYKSGQVAMQMNFIAFFPGISKDPQVGGEKTGFFPIPKGDKQLA QLGGQGISVVKYSDKKDMALQYMKWFAQPSIQKKWWDGGGFTCMKSILEAPGFETSTPYAKVFLDSMKIVKDFWAEPSYA QLMLAMQARVHDYVVAGKGTPNAALDALLKDWVQVFKEDGKIK >Mature_442_residues SKAKSTLWRLLAGAALGLTALGASAQDKQLTLCWAAWDPANALVELSKDFTAKTGIQMKYEFVPWPNFAQRMLNELNSRG KLCDLLIGDSQWIGSAATEGHYVKLNDFFDKNAIKMGDFMPATVEGYSTWPKGTKNYWALPAMGDAVAFTYRKDWFARPE LQAEFKQKHGRELAPPKTWDEFKQIGQFFQNRVIDGKKVYGAALYTERGSEGITMGVANTMYAHGMEYDNPKKPYDMNGY INGPGAVKGLKFYKDLYDCCVPPGHSNAYMTEDLDAYKSGQVAMQMNFIAFFPGISKDPQVGGEKTGFFPIPKGDKQLAQ LGGQGISVVKYSDKKDMALQYMKWFAQPSIQKKWWDGGGFTCMKSILEAPGFETSTPYAKVFLDSMKIVKDFWAEPSYAQ LMLAMQARVHDYVVAGKGTPNAALDALLKDWVQVFKEDGKIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49498; Mature: 49367
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAKSTLWRLLAGAALGLTALGASAQDKQLTLCWAAWDPANALVELSKDFTAKTGIQMK CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHCHHHCCCCEEE YEFVPWPNFAQRMLNELNSRGKLCDLLIGDSQWIGSAATEGHYVKLNDFFDKNAIKMGDF EEECCCCHHHHHHHHHHCCCCCEEEEEECCCHHCCCCCCCCCEEEECCCCCCCCEECCCC MPATVEGYSTWPKGTKNYWALPAMGDAVAFTYRKDWFARPELQAEFKQKHGRELAPPKTW CCCEECCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCH DEFKQIGQFFQNRVIDGKKVYGAALYTERGSEGITMGVANTMYAHGMEYDNPKKPYDMNG HHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCEEECHHHHHHHCCCCCCCCCCCCCCCC YINGPGAVKGLKFYKDLYDCCVPPGHSNAYMTEDLDAYKSGQVAMQMNFIAFFPGISKDP EECCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHCCCCEEEEEEEEEECCCCCCCC QVGGEKTGFFPIPKGDKQLAQLGGQGISVVKYSDKKDMALQYMKWFAQPSIQKKWWDGGG CCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHCCCCCC FTCMKSILEAPGFETSTPYAKVFLDSMKIVKDFWAEPSYAQLMLAMQARVHDYVVAGKGT HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCC PNAALDALLKDWVQVFKEDGKIK CHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SKAKSTLWRLLAGAALGLTALGASAQDKQLTLCWAAWDPANALVELSKDFTAKTGIQMK CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHCHHHCCCCEEE YEFVPWPNFAQRMLNELNSRGKLCDLLIGDSQWIGSAATEGHYVKLNDFFDKNAIKMGDF EEECCCCHHHHHHHHHHCCCCCEEEEEECCCHHCCCCCCCCCEEEECCCCCCCCEECCCC MPATVEGYSTWPKGTKNYWALPAMGDAVAFTYRKDWFARPELQAEFKQKHGRELAPPKTW CCCEECCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCH DEFKQIGQFFQNRVIDGKKVYGAALYTERGSEGITMGVANTMYAHGMEYDNPKKPYDMNG HHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCEEECHHHHHHHCCCCCCCCCCCCCCCC YINGPGAVKGLKFYKDLYDCCVPPGHSNAYMTEDLDAYKSGQVAMQMNFIAFFPGISKDP EECCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHCCCCEEEEEEEEEECCCCCCCC QVGGEKTGFFPIPKGDKQLAQLGGQGISVVKYSDKKDMALQYMKWFAQPSIQKKWWDGGG CCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHCCCCCC FTCMKSILEAPGFETSTPYAKVFLDSMKIVKDFWAEPSYAQLMLAMQARVHDYVVAGKGT HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCC PNAALDALLKDWVQVFKEDGKIK CHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA