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The map label for this gene is amyD [H]

Identifier: 91786604

GI number: 91786604

Start: 712822

End: 713832

Strand: Direct

Name: amyD [H]

Synonym: Bpro_0700

Alternate gene names: 91786604

Gene position: 712822-713832 (Clockwise)

Preceding gene: 91786603

Following gene: 91786605

Centisome position: 13.71

GC content: 62.81

Gene sequence:

>1011_bases
GTGAAATCCACGGAATTCACGCAATGGGTACCGCCGCAGGCGGCGGTACCCAGCGCCAATCTCCCGGAACCGGTGGGCTC
CGCCCATCGGGCCGCCCCCGCCGCGTCAGGGCGGCGTCCGCTCCTGGCCTTGCGGGGGCTGTCAGACCGGGCGCTGGCCT
GGCTCTTCGTGGGCCCCACTATCCTGCTGCTGCTGGCCTTCAACATCTTCCCGTTGCTGTGGACGATCTATCTCTCATTC
ACCAACTTCCGTGCCAACCGGCCCAATGCAGAAGTGGTGTGGCTGGGCTTGTCCAACTACCAGCGCGTACTTGGCGATGA
GGCAATCTGGGAGAACATGCGGACCACGGCGCACTTCCTGTGCTGGTCGATTGCCCTGCAACTGCTGCTGGGCTTCGCAT
TGGCCCTGCTGCTGAACCGCAAGTTCAGGTCGCACAGCTTCTGGAGCACGGCGATCCTGCTGCCCATGATGCTGGCGCCG
GCGGTGGTCGGCACCTTCTGGAAGTATTTCTTCGAGCCGCAGTACGGCATCTTCAACGCCATAGCGCGCCTCTTCGGCGG
CGCCGGCAACTTCACCATGCTGGGCGACACGCAGCTCTCGCCCTGGGCCATCGTGCTGGTGGACACCTGGATGTGGACGC
CTTACGTGATGCTGCTGCTGCTGGCCGGGCTGCGCTCCATTCCTCCCTATCTGTACGAGGCGGCCGAGATCGACCGGGCC
TCGGAGTGGACAAAATTCTGGCGCATCACGCTGCCGATGGTCATGCCCTTCATCATCCTGGCACTGCTGTTCCGCTCGAT
CGAGAACTTCAAGATGTTCGACCTGGTGGACAACCTCACCAATGGCGGCCCCGGCTCGGTGACCGAGCTGGCATCGATCC
ACCTCAAGCGCGAGGCTTTCGAGAAATGGCGCACCGGCTACAGCTCGGCCTTCGCCATCATCCTTTTCGTCGCGATCTAC
GGCATGTCGCTCGTGACGGTGCGTTTCCTGGACAAGGTGAAACAGAGATGA

Upstream 100 bases:

>100_bases
TGCATGACTACGTGGTCGCCGGCAAGGGCACCCCCAACGCCGCGCTGGACGCGCTACTGAAGGACTGGGTCCAGGTGTTC
AAGGAAGACGGGAAAATCAA

Downstream 100 bases:

>100_bases
AAACCATCCCCCACAGCCCGCTGGAGCCGACGGAACTCGCCAAATGGTTCGCCGGCGTCCTGGTCATCACCTACACCATC
ATCTCGCTGGTCCCGTTGGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKSTEFTQWVPPQAAVPSANLPEPVGSAHRAAPAASGRRPLLALRGLSDRALAWLFVGPTILLLLAFNIFPLLWTIYLSF
TNFRANRPNAEVVWLGLSNYQRVLGDEAIWENMRTTAHFLCWSIALQLLLGFALALLLNRKFRSHSFWSTAILLPMMLAP
AVVGTFWKYFFEPQYGIFNAIARLFGGAGNFTMLGDTQLSPWAIVLVDTWMWTPYVMLLLLAGLRSIPPYLYEAAEIDRA
SEWTKFWRITLPMVMPFIILALLFRSIENFKMFDLVDNLTNGGPGSVTELASIHLKREAFEKWRTGYSSAFAIILFVAIY
GMSLVTVRFLDKVKQR

Sequences:

>Translated_336_residues
MKSTEFTQWVPPQAAVPSANLPEPVGSAHRAAPAASGRRPLLALRGLSDRALAWLFVGPTILLLLAFNIFPLLWTIYLSF
TNFRANRPNAEVVWLGLSNYQRVLGDEAIWENMRTTAHFLCWSIALQLLLGFALALLLNRKFRSHSFWSTAILLPMMLAP
AVVGTFWKYFFEPQYGIFNAIARLFGGAGNFTMLGDTQLSPWAIVLVDTWMWTPYVMLLLLAGLRSIPPYLYEAAEIDRA
SEWTKFWRITLPMVMPFIILALLFRSIENFKMFDLVDNLTNGGPGSVTELASIHLKREAFEKWRTGYSSAFAIILFVAIY
GMSLVTVRFLDKVKQR
>Mature_336_residues
MKSTEFTQWVPPQAAVPSANLPEPVGSAHRAAPAASGRRPLLALRGLSDRALAWLFVGPTILLLLAFNIFPLLWTIYLSF
TNFRANRPNAEVVWLGLSNYQRVLGDEAIWENMRTTAHFLCWSIALQLLLGFALALLLNRKFRSHSFWSTAILLPMMLAP
AVVGTFWKYFFEPQYGIFNAIARLFGGAGNFTMLGDTQLSPWAIVLVDTWMWTPYVMLLLLAGLRSIPPYLYEAAEIDRA
SEWTKFWRITLPMVMPFIILALLFRSIENFKMFDLVDNLTNGGPGSVTELASIHLKREAFEKWRTGYSSAFAIILFVAIY
GMSLVTVRFLDKVKQR

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=259, Percent_Identity=31.6602316602317, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1789861, Length=303, Percent_Identity=26.7326732673267, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1790465, Length=258, Percent_Identity=27.5193798449612, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38064; Mature: 38064

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTEFTQWVPPQAAVPSANLPEPVGSAHRAAPAASGRRPLLALRGLSDRALAWLFVGPT
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHH
ILLLLAFNIFPLLWTIYLSFTNFRANRPNAEVVWLGLSNYQRVLGDEAIWENMRTTAHFL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHCHHHHHHHHHHHHHHH
CWSIALQLLLGFALALLLNRKFRSHSFWSTAILLPMMLAPAVVGTFWKYFFEPQYGIFNA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IARLFGGAGNFTMLGDTQLSPWAIVLVDTWMWTPYVMLLLLAGLRSIPPYLYEAAEIDRA
HHHHHCCCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCH
SEWTKFWRITLPMVMPFIILALLFRSIENFKMFDLVDNLTNGGPGSVTELASIHLKREAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EKWRTGYSSAFAIILFVAIYGMSLVTVRFLDKVKQR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSTEFTQWVPPQAAVPSANLPEPVGSAHRAAPAASGRRPLLALRGLSDRALAWLFVGPT
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHH
ILLLLAFNIFPLLWTIYLSFTNFRANRPNAEVVWLGLSNYQRVLGDEAIWENMRTTAHFL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHCHHHHHHHHHHHHHHH
CWSIALQLLLGFALALLLNRKFRSHSFWSTAILLPMMLAPAVVGTFWKYFFEPQYGIFNA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IARLFGGAGNFTMLGDTQLSPWAIVLVDTWMWTPYVMLLLLAGLRSIPPYLYEAAEIDRA
HHHHHCCCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCH
SEWTKFWRITLPMVMPFIILALLFRSIENFKMFDLVDNLTNGGPGSVTELASIHLKREAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EKWRTGYSSAFAIILFVAIYGMSLVTVRFLDKVKQR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]