| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is lldR [C]
Identifier: 91786599
GI number: 91786599
Start: 707730
End: 708440
Strand: Reverse
Name: lldR [C]
Synonym: Bpro_0695
Alternate gene names: 91786599
Gene position: 708440-707730 (Counterclockwise)
Preceding gene: 91786600
Following gene: 91786594
Centisome position: 13.62
GC content: 66.53
Gene sequence:
>711_bases GTGTCGGTTCAGCGGGTTCAGCGCGCGGACGCCGTTGCGCCGGCGACAGACGCGCTGGCTGAGTTGTCGACGAATCTTAC GGATCGTGCCTACGCCGTCGTGCGCCAGCTCATCCTCCAGCGAGAGCTGTCCGGCGGGGAAGTTCTGGTGGAAGGGCGGT TGGCCAATCGGCTCCAGATGTCCCGCACGCCGTTGCGCGAAGCATTGCTGCGGCTCGAAGGCGAGGGTCTGCTGGTGCGC GCCAGTGCGCGATCGTATGCGGTGCGGCGCATAACGGCCTCGCACTACTTCCAGTGCCTGCAGGTGCGCGAGCGCCTGGA GTCGCAGGCGGTGTCGCTCGCCATGGGGCGCGTTCCGGCGGCTGCGGTGCAGAGCTTACGCGATAGTATCCTGTCGCTGG ATTCAAGCCAGCAAGGCTCCAGCCACTGGCAGGCCGACGACCAGATCCACGGGCTGTTCGCGCGCGCCTCCGGCAACGCG ATGCTGGCCGATACCATCGCCCATCTGCGCGTGCTGTGCCGCCTGTTCGAGGTGGTCGATCCCTTCAAACGCATCGAGGA CGACCGGACGGAACACCTGGCCATCCTGGACGCATACATTGCGGGCAACGAGAAGGCGGCCGAGGAGGCGGTCGTGGCGC ACCTGCGAAATCTTGCGCGCTACACGCTCTCGCGGCTCAGCAACGGGCTGGTGAGCGACTTCTCGCCATAG
Upstream 100 bases:
>100_bases CAAGAAGCCTGGTCGGCCCAAGAAGTCCGTAGCCCGCGTGGTCGCCACCGCCACGCACGCAAATACCTTGCGCAAGGCCG TGCGGCCCGCCGCTGGCCGG
Downstream 100 bases:
>100_bases CCCGACGTAGCCCGACAGCCACGGTCAGTGGCGCAGGATCTTCCCGACGAACTCGCGGGTGCGCGCCTCGCGGGGCCGGT CGAAGATCTGCTGCGGGTCG
Product: GntR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Transcriptional Regulator Protein; GntR Family Regulatory Protein
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MSVQRVQRADAVAPATDALAELSTNLTDRAYAVVRQLILQRELSGGEVLVEGRLANRLQMSRTPLREALLRLEGEGLLVR ASARSYAVRRITASHYFQCLQVRERLESQAVSLAMGRVPAAAVQSLRDSILSLDSSQQGSSHWQADDQIHGLFARASGNA MLADTIAHLRVLCRLFEVVDPFKRIEDDRTEHLAILDAYIAGNEKAAEEAVVAHLRNLARYTLSRLSNGLVSDFSP
Sequences:
>Translated_236_residues MSVQRVQRADAVAPATDALAELSTNLTDRAYAVVRQLILQRELSGGEVLVEGRLANRLQMSRTPLREALLRLEGEGLLVR ASARSYAVRRITASHYFQCLQVRERLESQAVSLAMGRVPAAAVQSLRDSILSLDSSQQGSSHWQADDQIHGLFARASGNA MLADTIAHLRVLCRLFEVVDPFKRIEDDRTEHLAILDAYIAGNEKAAEEAVVAHLRNLARYTLSRLSNGLVSDFSP >Mature_235_residues SVQRVQRADAVAPATDALAELSTNLTDRAYAVVRQLILQRELSGGEVLVEGRLANRLQMSRTPLREALLRLEGEGLLVRA SARSYAVRRITASHYFQCLQVRERLESQAVSLAMGRVPAAAVQSLRDSILSLDSSQQGSSHWQADDQIHGLFARASGNAM LADTIAHLRVLCRLFEVVDPFKRIEDDRTEHLAILDAYIAGNEKAAEEAVVAHLRNLARYTLSRLSNGLVSDFSP
Specific function: May Be A Regulatory Protein For The Lct Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26030; Mature: 25899
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: PS50949 HTH_GNTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQRVQRADAVAPATDALAELSTNLTDRAYAVVRQLILQRELSGGEVLVEGRLANRLQM CCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHH SRTPLREALLRLEGEGLLVRASARSYAVRRITASHYFQCLQVRERLESQAVSLAMGRVPA HHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AAVQSLRDSILSLDSSQQGSSHWQADDQIHGLFARASGNAMLADTIAHLRVLCRLFEVVD HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH PFKRIEDDRTEHLAILDAYIAGNEKAAEEAVVAHLRNLARYTLSRLSNGLVSDFSP HHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SVQRVQRADAVAPATDALAELSTNLTDRAYAVVRQLILQRELSGGEVLVEGRLANRLQM CHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHH SRTPLREALLRLEGEGLLVRASARSYAVRRITASHYFQCLQVRERLESQAVSLAMGRVPA HHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AAVQSLRDSILSLDSSQQGSSHWQADDQIHGLFARASGNAMLADTIAHLRVLCRLFEVVD HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH PFKRIEDDRTEHLAILDAYIAGNEKAAEEAVVAHLRNLARYTLSRLSNGLVSDFSP HHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA