Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yaeJ [C]

Identifier: 91786600

GI number: 91786600

Start: 708594

End: 708953

Strand: Reverse

Name: yaeJ [C]

Synonym: Bpro_0696

Alternate gene names: 91786600

Gene position: 708953-708594 (Counterclockwise)

Preceding gene: 91786601

Following gene: 91786599

Centisome position: 13.63

GC content: 61.94

Gene sequence:

>360_bases
ATGAGGAATAAAGATCTGAGCAAGCCGGGGCTTCTTCGGCCCCGGCCCGCCCGTTGGCCAGTTGCACTACTACGCGTAAT
CACCCAGGAAGGCATGCTGATACTCAGGGCGCAGCGGCATCGCAGCCCGGACATGGGCCGTGCCGATGCGCTGGCCCACC
TACCCCGCTACAGGAACTGCTCGACTGTGTCGCCACATGTGTCCTGCCCCAACCGGCCGACCCACGGAGTCAAGCAGCGC
CGGCTCAAGAACGAGAGCCTGCGCGAGTGGTTGAAGGGCGGACACGCAGCGTTGATGCGAGCGCGAGAACACCCTGTGCT
GTGTGTGCTGTGGTATCGTTTAATTGCACACAGTTTGTAG

Upstream 100 bases:

>100_bases
GGCAACGCCGTCTTGTATCGCACCTGCTTCAACGCAAAACCCGATCGAATTTTCTCAATCTCCGGAATCGGCGTGAGCTG
GTTTGCCTGCAGTAGCCCTC

Downstream 100 bases:

>100_bases
ACAAAGCATATGAAATCCAAAATCACGACAAAGGCATCAGTGCATGCGGCAGCCAAGAAGCCTGGTCGGCCCAAGAAGTC
CGTAGCCCGCGTGGTCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MRNKDLSKPGLLRPRPARWPVALLRVITQEGMLILRAQRHRSPDMGRADALAHLPRYRNCSTVSPHVSCPNRPTHGVKQR
RLKNESLREWLKGGHAALMRAREHPVLCVLWYRLIAHSL

Sequences:

>Translated_119_residues
MRNKDLSKPGLLRPRPARWPVALLRVITQEGMLILRAQRHRSPDMGRADALAHLPRYRNCSTVSPHVSCPNRPTHGVKQR
RLKNESLREWLKGGHAALMRAREHPVLCVLWYRLIAHSL
>Mature_119_residues
MRNKDLSKPGLLRPRPARWPVALLRVITQEGMLILRAQRHRSPDMGRADALAHLPRYRNCSTVSPHVSCPNRPTHGVKQR
RLKNESLREWLKGGHAALMRAREHPVLCVLWYRLIAHSL

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13746; Mature: 13746

Theoretical pI: Translated: 12.11; Mature: 12.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNKDLSKPGLLRPRPARWPVALLRVITQEGMLILRAQRHRSPDMGRADALAHLPRYRNC
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHEEEHHHCCCCCCCHHHHHHHCCCCCCC
STVSPHVSCPNRPTHGVKQRRLKNESLREWLKGGHAALMRAREHPVLCVLWYRLIAHSL
CCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRNKDLSKPGLLRPRPARWPVALLRVITQEGMLILRAQRHRSPDMGRADALAHLPRYRNC
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHEEEHHHCCCCCCCHHHHHHHCCCCCCC
STVSPHVSCPNRPTHGVKQRRLKNESLREWLKGGHAALMRAREHPVLCVLWYRLIAHSL
CCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA