| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is glnP [H]
Identifier: 91786596
GI number: 91786596
Start: 705633
End: 706301
Strand: Direct
Name: glnP [H]
Synonym: Bpro_0692
Alternate gene names: 91786596
Gene position: 705633-706301 (Clockwise)
Preceding gene: 91786595
Following gene: 91786597
Centisome position: 13.57
GC content: 61.29
Gene sequence:
>669_bases ATGCAATTCGACTACACACCGGTTCTCGAGCGACTTCCCTATCTGATCGGCGGCGCGTGGCTGAGCCTGCAGATCGCGTT TCTCGCCTTTGCCTTCGGCATGCTGATCGGCCTGGGCGGTGCATCGGTACGCGCCTACGGCCCACCCTGGGCACGCCGCA TCGTCGGCGCCTACGTGGTGTTCTTCACCAACACGCCGCAACTGGTCCAGATCTTCTTCATCTTCTTCGCGCTGCCTGAC GCGGGCATCCTGTTGTCGCCCTACCAGGCCGTGCTTATCGGCATGGTGCTCAATGCCGGTGCATACCTCACCGAAATACA GCGCGCAGGCTTTGAATCGGTGCGTCAGCTCGAACTTGAGGCGGCCGAGACTCTGGGCTTCTCGCGCATCCAGACCATCC GCTACGTGATCCTGCCGCACATCGCGCGCGTGCTGTTCCCACCGCTTTCCAATCAGTACATCCTGATGACGCTCGGCAGC TCGATGGCCGCGGTGTTCGGGGTCGAGGAACTCACGGGCCGGGCCTACAACATCAACTCTGAAACCTTCCGCTCGATCGA GGTGTTCTCGGTGGCTGCGGTGCTCTACATCGTGCTCACACTGATCGCCACCTTGTCGCTTGCCTTCGTCGGCAAGCGCT TCTTCCGCGCCAAGATGAGGTGGTTCTGA
Upstream 100 bases:
>100_bases CATGACCCGCGCACCGCACCGACCTACAAGTAAGCGTCGCACAGAATGAATCCGCGCCGCGCGCAGCCTGCGCGCGGCGC CGGTTTTCGAGCCAGACCCC
Downstream 100 bases:
>100_bases TGTGGGCGCAGATCGTCGAAGAGCTGCCGCGCTTCTTCAGCTACTACAACCTGATCTTCTTTGCGAAGGCGCTGGGCGTG ACCTTCGCGCTGTCGGCCAT
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MQFDYTPVLERLPYLIGGAWLSLQIAFLAFAFGMLIGLGGASVRAYGPPWARRIVGAYVVFFTNTPQLVQIFFIFFALPD AGILLSPYQAVLIGMVLNAGAYLTEIQRAGFESVRQLELEAAETLGFSRIQTIRYVILPHIARVLFPPLSNQYILMTLGS SMAAVFGVEELTGRAYNINSETFRSIEVFSVAAVLYIVLTLIATLSLAFVGKRFFRAKMRWF
Sequences:
>Translated_222_residues MQFDYTPVLERLPYLIGGAWLSLQIAFLAFAFGMLIGLGGASVRAYGPPWARRIVGAYVVFFTNTPQLVQIFFIFFALPD AGILLSPYQAVLIGMVLNAGAYLTEIQRAGFESVRQLELEAAETLGFSRIQTIRYVILPHIARVLFPPLSNQYILMTLGS SMAAVFGVEELTGRAYNINSETFRSIEVFSVAAVLYIVLTLIATLSLAFVGKRFFRAKMRWF >Mature_222_residues MQFDYTPVLERLPYLIGGAWLSLQIAFLAFAFGMLIGLGGASVRAYGPPWARRIVGAYVVFFTNTPQLVQIFFIFFALPD AGILLSPYQAVLIGMVLNAGAYLTEIQRAGFESVRQLELEAAETLGFSRIQTIRYVILPHIARVLFPPLSNQYILMTLGS SMAAVFGVEELTGRAYNINSETFRSIEVFSVAAVLYIVLTLIATLSLAFVGKRFFRAKMRWF
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=218, Percent_Identity=38.0733944954128, Blast_Score=144, Evalue=4e-36, Organism=Escherichia coli, GI1788226, Length=214, Percent_Identity=36.4485981308411, Blast_Score=123, Evalue=8e-30, Organism=Escherichia coli, GI1786873, Length=225, Percent_Identity=27.1111111111111, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1788645, Length=227, Percent_Identity=28.1938325991189, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1788646, Length=208, Percent_Identity=25.4807692307692, Blast_Score=70, Evalue=8e-14, Organism=Escherichia coli, GI48994930, Length=135, Percent_Identity=31.1111111111111, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=25.2336448598131, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24743; Mature: 24743
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFDYTPVLERLPYLIGGAWLSLQIAFLAFAFGMLIGLGGASVRAYGPPWARRIVGAYVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEE FFTNTPQLVQIFFIFFALPDAGILLSPYQAVLIGMVLNAGAYLTEIQRAGFESVRQLELE EECCCHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AAETLGFSRIQTIRYVILPHIARVLFPPLSNQYILMTLGSSMAAVFGVEELTGRAYNINS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCEEECCH ETFRSIEVFSVAAVLYIVLTLIATLSLAFVGKRFFRAKMRWF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQFDYTPVLERLPYLIGGAWLSLQIAFLAFAFGMLIGLGGASVRAYGPPWARRIVGAYVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEE FFTNTPQLVQIFFIFFALPDAGILLSPYQAVLIGMVLNAGAYLTEIQRAGFESVRQLELE EECCCHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AAETLGFSRIQTIRYVILPHIARVLFPPLSNQYILMTLGSSMAAVFGVEELTGRAYNINS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCEEECCH ETFRSIEVFSVAAVLYIVLTLIATLSLAFVGKRFFRAKMRWF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]