| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is hyuA [H]
Identifier: 91786590
GI number: 91786590
Start: 699170
End: 700579
Strand: Reverse
Name: hyuA [H]
Synonym: Bpro_0686
Alternate gene names: 91786590
Gene position: 700579-699170 (Counterclockwise)
Preceding gene: 91786591
Following gene: 91786589
Centisome position: 13.47
GC content: 65.32
Gene sequence:
>1410_bases ATGTCCCGCAAGATCATACGCAACGGCCGCATCGTCACGGCCGTGGACGACTACATCGCCGATCTGCTGATCGACGACGG CCGGATCGTCGCTATCGGCCGCTCCCTCAATGCGGACCCCGGGGTGGAAGTCATCGACGCCACCGGTCTGCTCGTGCTGC CTGGCGGCGTGGACTGCCACACGCACATGGACAACACTTTCGGCGACTCCACCACCTGCGACAGTTTCGAGTCCGGCACG CGTTCGGCGGCCTTCGGCGGCACAACGACGATCGTGGACTTCGCGTTCCAGCGCAAAGACGTGAGCGTGCTCGAAGCGAT CGAGCGCGCCCAGGCCAAGGGCGTGGAAGCCTGCATCGACTATGGCTTTCACGTCATCGTGACCGGCGTCAACGACCAGA CCCTGGCCGACATGCAGCACGCGATCCGGCATGAAGGCGTGTCGAGCTTCAAGATGTTCATGGCGTATCCGGGCTCGGTG ATGGTCGACGACGCGGCCATCTTCCAGGCCATGCGCATGGTGGGCCAGCACGGCGGGATGATCGCTCTGCATGCCGAGAA CGGCACCATCATCGAGCTTCTCATCAAGGAAGCGCTGGCGCAGGGCCACACGGCGCCAAAGTACCATGCGCTCACGCGGC CCGCCATCATGGAGGGCGAGGCCACGCACCGCGGCATCAAGCTCGCCGAACTCGCCGGCGCGCCGGTGTACTTCGTGCAT CTTTCGGCCAGGGAAGCGCTCAAGCACGTGATCGAAGCGCGCGACATGGGCGTGCCGGTGTTCGCCGAAACCTGCCCGCA TTACCTCTTCTTTGACGACAGTGCCTACGACAACGAAGACTTCGATCTGGCGCGCTACGTGATGAGCCCACCGTTGCGCT CCAAGGAATCGCAGCAGGCGCTCTGGACCGCACTGCGCACCGACGACCTGCAGCTCGTGTCGACCGACCATTGCCCGTTC TGCATGAAGGAAGGCCATCTTGGCCGCGTCAACCAGAAGCCGTACGGGCGCGACGATTTCTCGAAGATCCCGAATGGCGT GCCGGGCGTCGAAACACGCATGGCGACCCTCCACGACGGCGGCGTGCGGTCCGGTCGCATCTCGCTCAACCGCTTCGTCG AGTTGACCTCGACGGCGCCGTCGAAGCTCTTCGGCCTGTTTCCGCGCAAAGGCACCGTCGCGGTCGGCAGCGACGCCGAC CTCGTGCTGTTCGATCCCGGCGCCCAGCACGTCCTTTCGGCGAGCACCCAGCACGGCAACTGCGATTTCACACTCTTCGA AGGCAAGGGCATCACCGGCCAGGTGAGCAAGGTGCTGCTGCGCGGCGAACTCATCGTCGACGGCGACCGGTGGCTGGGCA GGGCCGGCAGCGGGCGCTTCGTGCCGCGCGGCGAATCGGGCGGCTGGTGA
Upstream 100 bases:
>100_bases GCCGATCGGGCTGCTTCCGGCCGAAGAGGTCGCCGCACTGGAGCGTGCGCTGGCCGAAGCCGGCGTCGGCGCGTAATTCG AATCTTTAGGAGCTACTGCC
Downstream 100 bases:
>100_bases GCGTCCGTGCCAACCTACGACTACGCTTGTACGCGCTGCGGCCCTTTCACCGCGCGGCGGCCGCTGGCCGTATTCGACCA ACCGGTGCCTTGCCCCGCAT
Product: dihydropyrimidinase
Products: 3-ureidopropanoate
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MSRKIIRNGRIVTAVDDYIADLLIDDGRIVAIGRSLNADPGVEVIDATGLLVLPGGVDCHTHMDNTFGDSTTCDSFESGT RSAAFGGTTTIVDFAFQRKDVSVLEAIERAQAKGVEACIDYGFHVIVTGVNDQTLADMQHAIRHEGVSSFKMFMAYPGSV MVDDAAIFQAMRMVGQHGGMIALHAENGTIIELLIKEALAQGHTAPKYHALTRPAIMEGEATHRGIKLAELAGAPVYFVH LSAREALKHVIEARDMGVPVFAETCPHYLFFDDSAYDNEDFDLARYVMSPPLRSKESQQALWTALRTDDLQLVSTDHCPF CMKEGHLGRVNQKPYGRDDFSKIPNGVPGVETRMATLHDGGVRSGRISLNRFVELTSTAPSKLFGLFPRKGTVAVGSDAD LVLFDPGAQHVLSASTQHGNCDFTLFEGKGITGQVSKVLLRGELIVDGDRWLGRAGSGRFVPRGESGGW
Sequences:
>Translated_469_residues MSRKIIRNGRIVTAVDDYIADLLIDDGRIVAIGRSLNADPGVEVIDATGLLVLPGGVDCHTHMDNTFGDSTTCDSFESGT RSAAFGGTTTIVDFAFQRKDVSVLEAIERAQAKGVEACIDYGFHVIVTGVNDQTLADMQHAIRHEGVSSFKMFMAYPGSV MVDDAAIFQAMRMVGQHGGMIALHAENGTIIELLIKEALAQGHTAPKYHALTRPAIMEGEATHRGIKLAELAGAPVYFVH LSAREALKHVIEARDMGVPVFAETCPHYLFFDDSAYDNEDFDLARYVMSPPLRSKESQQALWTALRTDDLQLVSTDHCPF CMKEGHLGRVNQKPYGRDDFSKIPNGVPGVETRMATLHDGGVRSGRISLNRFVELTSTAPSKLFGLFPRKGTVAVGSDAD LVLFDPGAQHVLSASTQHGNCDFTLFEGKGITGQVSKVLLRGELIVDGDRWLGRAGSGRFVPRGESGGW >Mature_468_residues SRKIIRNGRIVTAVDDYIADLLIDDGRIVAIGRSLNADPGVEVIDATGLLVLPGGVDCHTHMDNTFGDSTTCDSFESGTR SAAFGGTTTIVDFAFQRKDVSVLEAIERAQAKGVEACIDYGFHVIVTGVNDQTLADMQHAIRHEGVSSFKMFMAYPGSVM VDDAAIFQAMRMVGQHGGMIALHAENGTIIELLIKEALAQGHTAPKYHALTRPAIMEGEATHRGIKLAELAGAPVYFVHL SAREALKHVIEARDMGVPVFAETCPHYLFFDDSAYDNEDFDLARYVMSPPLRSKESQQALWTALRTDDLQLVSTDHCPFC MKEGHLGRVNQKPYGRDDFSKIPNGVPGVETRMATLHDGGVRSGRISLNRFVELTSTAPSKLFGLFPRKGTVAVGSDADL VLFDPGAQHVLSASTQHGNCDFTLFEGKGITGQVSKVLLRGELIVDGDRWLGRAGSGRFVPRGESGGW
Specific function: Catalyzes the stereospecific hydrolysis of the cyclic amide bond of D-hydantoin derivatives [H]
COG id: COG0044
COG function: function code F; Dihydroorotase and related cyclic amidohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHOase family. Hydantoinase/dihydropyrimidinase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503375, Length=471, Percent_Identity=41.6135881104034, Blast_Score=341, Evalue=1e-93, Organism=Homo sapiens, GI19923821, Length=463, Percent_Identity=36.9330453563715, Blast_Score=300, Evalue=2e-81, Organism=Homo sapiens, GI4503379, Length=464, Percent_Identity=35.7758620689655, Blast_Score=296, Evalue=2e-80, Organism=Homo sapiens, GI190194363, Length=464, Percent_Identity=36.2068965517241, Blast_Score=296, Evalue=4e-80, Organism=Homo sapiens, GI4503051, Length=464, Percent_Identity=34.4827586206897, Blast_Score=284, Evalue=1e-76, Organism=Homo sapiens, GI62422571, Length=464, Percent_Identity=34.4827586206897, Blast_Score=282, Evalue=4e-76, Organism=Homo sapiens, GI4503377, Length=464, Percent_Identity=32.9741379310345, Blast_Score=271, Evalue=7e-73, Organism=Homo sapiens, GI18105007, Length=479, Percent_Identity=23.5908141962422, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI87082175, Length=464, Percent_Identity=40.5172413793103, Blast_Score=337, Evalue=1e-93, Organism=Escherichia coli, GI1786722, Length=469, Percent_Identity=30.7036247334755, Blast_Score=202, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17539558, Length=462, Percent_Identity=39.3939393939394, Blast_Score=311, Evalue=4e-85, Organism=Caenorhabditis elegans, GI71989490, Length=464, Percent_Identity=38.5775862068966, Blast_Score=308, Evalue=3e-84, Organism=Caenorhabditis elegans, GI86575075, Length=446, Percent_Identity=30.4932735426009, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI193204318, Length=436, Percent_Identity=24.0825688073394, Blast_Score=97, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6322218, Length=403, Percent_Identity=29.2803970223325, Blast_Score=130, Evalue=4e-31, Organism=Drosophila melanogaster, GI221377917, Length=468, Percent_Identity=38.2478632478632, Blast_Score=308, Evalue=7e-84, Organism=Drosophila melanogaster, GI17137462, Length=465, Percent_Identity=38.0645161290323, Blast_Score=305, Evalue=5e-83, Organism=Drosophila melanogaster, GI24644287, Length=302, Percent_Identity=36.4238410596026, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI24644289, Length=231, Percent_Identity=38.0952380952381, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI24642586, Length=403, Percent_Identity=25.8064516129032, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI18859883, Length=422, Percent_Identity=25.8293838862559, Blast_Score=87, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011778 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: 3.5.2.2
Molecular weight: Translated: 50835; Mature: 50704
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKIIRNGRIVTAVDDYIADLLIDDGRIVAIGRSLNADPGVEVIDATGLLVLPGGVDCH CCCCEECCCCEEEEHHHHHHHHEECCCEEEEECCCCCCCCCCEEEECCCEEEECCCCEEE THMDNTFGDSTTCDSFESGTRSAAFGGTTTIVDFAFQRKDVSVLEAIERAQAKGVEACID CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHCCCCHHHHHHHHHHHHCCHHHHHH YGFHVIVTGVNDQTLADMQHAIRHEGVSSFKMFMAYPGSVMVDDAAIFQAMRMVGQHGGM CCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHCCCCE IALHAENGTIIELLIKEALAQGHTAPKYHALTRPAIMEGEATHRGIKLAELAGAPVYFVH EEEECCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCEECCCCHHCCEEEEHHCCCCEEEEE LSAREALKHVIEARDMGVPVFAETCPHYLFFDDSAYDNEDFDLARYVMSPPLRSKESQQA ECHHHHHHHHHHHHHCCCCCHHHHCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHH LWTALRTDDLQLVSTDHCPFCMKEGHLGRVNQKPYGRDDFSKIPNGVPGVETRMATLHDG HHHHHCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHEEEEEECC GVRSGRISLNRFVELTSTAPSKLFGLFPRKGTVAVGSDADLVLFDPGAQHVLSASTQHGN CCCCCEEEHHHEEEECCCCCHHHHCCCCCCCEEEECCCCCEEEECCCHHHHHHCCCCCCC CDFTLFEGKGITGQVSKVLLRGELIVDGDRWLGRAGSGRFVPRGESGGW CCEEEEECCCCCHHHHHHHEECEEEEECCHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRKIIRNGRIVTAVDDYIADLLIDDGRIVAIGRSLNADPGVEVIDATGLLVLPGGVDCH CCCEECCCCEEEEHHHHHHHHEECCCEEEEECCCCCCCCCCEEEECCCEEEECCCCEEE THMDNTFGDSTTCDSFESGTRSAAFGGTTTIVDFAFQRKDVSVLEAIERAQAKGVEACID CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHCCCCHHHHHHHHHHHHCCHHHHHH YGFHVIVTGVNDQTLADMQHAIRHEGVSSFKMFMAYPGSVMVDDAAIFQAMRMVGQHGGM CCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHCCCCE IALHAENGTIIELLIKEALAQGHTAPKYHALTRPAIMEGEATHRGIKLAELAGAPVYFVH EEEECCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCEECCCCHHCCEEEEHHCCCCEEEEE LSAREALKHVIEARDMGVPVFAETCPHYLFFDDSAYDNEDFDLARYVMSPPLRSKESQQA ECHHHHHHHHHHHHHCCCCCHHHHCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHH LWTALRTDDLQLVSTDHCPFCMKEGHLGRVNQKPYGRDDFSKIPNGVPGVETRMATLHDG HHHHHCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHEEEEEECC GVRSGRISLNRFVELTSTAPSKLFGLFPRKGTVAVGSDADLVLFDPGAQHVLSASTQHGN CCCCCEEEHHHEEEECCCCCHHHHCCCCCCCEEEECCCCCEEEECCCHHHHHHCCCCCCC CDFTLFEGKGITGQVSKVLLRGELIVDGDRWLGRAGSGRFVPRGESGGW CCEEEEECCCCCHHHHHHHEECEEEEECCHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 5,6-dihydrouracil; H2O
Specific reaction: 5,6-dihydrouracil + H2O = 3-ureidopropanoate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]