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The map label for this gene is dapA [H]

Identifier: 91786591

GI number: 91786591

Start: 700604

End: 701539

Strand: Reverse

Name: dapA [H]

Synonym: Bpro_0687

Alternate gene names: 91786591

Gene position: 701539-700604 (Counterclockwise)

Preceding gene: 91786592

Following gene: 91786590

Centisome position: 13.49

GC content: 67.95

Gene sequence:

>936_bases
ATGATTCCCAAACGACCTGACGCTTTTCAAGGCATCTATGCCGCCACCCTGTGCCCGCTGCATGGCGATGGCCGCATCGA
TGAGACCACGCTGGCGCGCCACCTGGAGGCCAACGCCTTCGTTCCAGGCATGACGGGCCTGCTCATCAACGGCCATGCCG
GCGAGAATTTCTCGCTCTCTCGCGAAGAGAAGCGCCGCGTGACCGAGATCGCCTTCGAGGTCTGTGGCCACCACGCCATT
CTCGTCTGCGGCATCAACGCCGAAGACAGCCTCGAGGCTCAGCGCCACGTCGACGACGCCAAGGCCGCCGGCGCCGACGC
GGTGCTGGTCTTCCCGCCGTTCTCCTGGGCGCTCTCGCAGGATTCGCGCATGGCCGTGACGCATCACCGGACGGCCAATG
CCAACGCACAGATGCCCTTGATGCTCTACCAGGCCGGCATCAATGCAGGCGCGATGGCCTATCGCCCCGAGGTGCTGGCC
GAGCTCGCGCAATTGCCCCACGTGGTCGGCGTCAAGGAGGGCAGCTGGGAGACCGCGGCCTACGAGGCCAACCGCCGCCT
CGTGAAGCGCGTGGCGCCGCACGTGGCCATGATGGCCTCGGGTGACGAGCATCTGTTCACCTGCTTCGCCATCGGCAGCG
ACGGCAGCCTCGTGAGCCTGGCCGCCGTAGTGCCCGAGCTCGTGATCGCGCTCGACCAGGCGATCCAGCGCAAGGACCTC
GACGAGGCGCGCCGCCTGAACGAGCGCATCTATCCGCTTGCCAAGGCGATCTACGGCACCCCGCCCGGCGGCTATGCGAC
GGCGCGGCTCAAGACCTGCCTGAGGTTGCTCGGCCGCTTTCCGAGCGACGCCATGCGGCCGCCGATCGGGCTGCTTCCGG
CCGAAGAGGTCGCCGCACTGGAGCGTGCGCTGGCCGAAGCCGGCGTCGGCGCGTAA

Upstream 100 bases:

>100_bases
ACATCCTCGGCCAGCAGCCCGACCTGCCTCTTTTCGATCCCGCCCGCCTGGTGGGCATGCCGATGCCCGGCGCTTGAAAT
CTCCCATTCCATTCCATTCC

Downstream 100 bases:

>100_bases
TTCGAATCTTTAGGAGCTACTGCCATGTCCCGCAAGATCATACGCAACGGCCGCATCGTCACGGCCGTGGACGACTACAT
CGCCGATCTGCTGATCGACG

Product: dihydrodipicolinate synthetase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MIPKRPDAFQGIYAATLCPLHGDGRIDETTLARHLEANAFVPGMTGLLINGHAGENFSLSREEKRRVTEIAFEVCGHHAI
LVCGINAEDSLEAQRHVDDAKAAGADAVLVFPPFSWALSQDSRMAVTHHRTANANAQMPLMLYQAGINAGAMAYRPEVLA
ELAQLPHVVGVKEGSWETAAYEANRRLVKRVAPHVAMMASGDEHLFTCFAIGSDGSLVSLAAVVPELVIALDQAIQRKDL
DEARRLNERIYPLAKAIYGTPPGGYATARLKTCLRLLGRFPSDAMRPPIGLLPAEEVAALERALAEAGVGA

Sequences:

>Translated_311_residues
MIPKRPDAFQGIYAATLCPLHGDGRIDETTLARHLEANAFVPGMTGLLINGHAGENFSLSREEKRRVTEIAFEVCGHHAI
LVCGINAEDSLEAQRHVDDAKAAGADAVLVFPPFSWALSQDSRMAVTHHRTANANAQMPLMLYQAGINAGAMAYRPEVLA
ELAQLPHVVGVKEGSWETAAYEANRRLVKRVAPHVAMMASGDEHLFTCFAIGSDGSLVSLAAVVPELVIALDQAIQRKDL
DEARRLNERIYPLAKAIYGTPPGGYATARLKTCLRLLGRFPSDAMRPPIGLLPAEEVAALERALAEAGVGA
>Mature_311_residues
MIPKRPDAFQGIYAATLCPLHGDGRIDETTLARHLEANAFVPGMTGLLINGHAGENFSLSREEKRRVTEIAFEVCGHHAI
LVCGINAEDSLEAQRHVDDAKAAGADAVLVFPPFSWALSQDSRMAVTHHRTANANAQMPLMLYQAGINAGAMAYRPEVLA
ELAQLPHVVGVKEGSWETAAYEANRRLVKRVAPHVAMMASGDEHLFTCFAIGSDGSLVSLAAVVPELVIALDQAIQRKDL
DEARRLNERIYPLAKAIYGTPPGGYATARLKTCLRLLGRFPSDAMRPPIGLLPAEEVAALERALAEAGVGA

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI87082415, Length=251, Percent_Identity=25.0996015936255, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786463, Length=284, Percent_Identity=23.5915492957746, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789620, Length=289, Percent_Identity=23.8754325259516, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 33429; Mature: 33429

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPKRPDAFQGIYAATLCPLHGDGRIDETTLARHLEANAFVPGMTGLLINGHAGENFSLS
CCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC
REEKRRVTEIAFEVCGHHAILVCGINAEDSLEAQRHVDDAKAAGADAVLVFPPFSWALSQ
HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCC
DSRMAVTHHRTANANAQMPLMLYQAGINAGAMAYRPEVLAELAQLPHVVGVKEGSWETAA
CCCEEEEEECCCCCCCCCCEEEEECCCCCCCHHCCHHHHHHHHHCCCEEECCCCCCCHHH
YEANRRLVKRVAPHVAMMASGDEHLFTCFAIGSDGSLVSLAAVVPELVIALDQAIQRKDL
HHHHHHHHHHHHHHHEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCH
DEARRLNERIYPLAKAIYGTPPGGYATARLKTCLRLLGRFPSDAMRPPIGLLPAEEVAAL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHH
ERALAEAGVGA
HHHHHHCCCCC
>Mature Secondary Structure
MIPKRPDAFQGIYAATLCPLHGDGRIDETTLARHLEANAFVPGMTGLLINGHAGENFSLS
CCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC
REEKRRVTEIAFEVCGHHAILVCGINAEDSLEAQRHVDDAKAAGADAVLVFPPFSWALSQ
HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCC
DSRMAVTHHRTANANAQMPLMLYQAGINAGAMAYRPEVLAELAQLPHVVGVKEGSWETAA
CCCEEEEEECCCCCCCCCCEEEEECCCCCCCHHCCHHHHHHHHHCCCEEECCCCCCCHHH
YEANRRLVKRVAPHVAMMASGDEHLFTCFAIGSDGSLVSLAAVVPELVIALDQAIQRKDL
HHHHHHHHHHHHHHHEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCH
DEARRLNERIYPLAKAIYGTPPGGYATARLKTCLRLLGRFPSDAMRPPIGLLPAEEVAAL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHH
ERALAEAGVGA
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA