The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is dan [H]

Identifier: 91786568

GI number: 91786568

Start: 674781

End: 676262

Strand: Direct

Name: dan [H]

Synonym: Bpro_0663

Alternate gene names: 91786568

Gene position: 674781-676262 (Clockwise)

Preceding gene: 91786567

Following gene: 91786571

Centisome position: 12.98

GC content: 65.79

Gene sequence:

>1482_bases
ATGACACGTGCGACCCTGCTTGAAAGCGGGCTGGTGATTGACGGTACCGGTGCTGAAGGCTGGATTGGCGACGTTCTGCT
GATGGACGGCCGTATTGCGGCGCTGGGCAAAAATCTCAGTGACCAGCTGCCCGAAGGCCTGAAGCCCGAAGAGGTGGCCC
GTATCGATTGCACGGGCCTGGCCATCGCCCCGGGCTTTATCGATGTGCACACGCACGACGATGCGATCGTGCTCAAGCAG
CCCGACATGCTGCCCAAGGTGTCGCAGGGCATCACCACCGTCATCACCGGCAACTGCGGCATTTCGCTGCTGCCTTTCAT
CGTCGACAACCCCGAACCCCCGCTGAATCTGCTCGGGGCCGATTCGTTTCGCTTTGACTCCGTTCAAAGCTATGAGCGCG
CCATCATCCAGGCGCAGCCGGCAGTGAATGTCGCCGTGCTGATTGGCCACACCACCCTGCGCTTTGCCTGCATGGGCGAC
CTGACCCGCGCCGCCAGCGCCAGCGAGCTCGACGCCATGTGCGCGCTGCTCACGCAGTGCATGGAGAGCGGCGCCACCGG
CATGTCGTCAGGCCTTTTTTACGAACCGGCCTTTGCCGCGCCGGCGCAGGAAGTGGTGCGCCTGGCCCAGGTGGTGTCGC
GTTTCGGCGGGGTGTACAGCACCCACCTGCGCGATGAAATGGCGACCATCGTGGAAGCGCTGCACGAGGCGGGCGATACC
GCTTTCAGCGCCGGCGTGCCGCTGATCGTGTCGCACCACAAATGCGCCGGGCCCGCCAACTGGGGTCGCACGCAGCAGAC
CCTGCCGCTGATTGAATCGCTCGCCCGCCGCCAGCCGGTGGCCATGGACGTCTACCCCTATGTGGCCGGCTCCACCGTGC
TGCGTGAAGACCTGGTCGATGGCGTGATCGACGTGCTGGTGAGCTGGTCCACGCCGCACCCCGAAATGACGGGCCGCACG
CTGGCCTCGATTGCGGCCGAGTGGGGCGTTGACCAGAAGGCGGTGTGCCGCCGCCTGCAGCCCGGAGGCGCCTGTTATTT
CCAGATGCACGAAGACGACGTGCGGCGCGTCGTGGCCCACCCGCTGACCATGATCGGCTCGGACGGCTTGCCGCATGACC
AGCATCCGCATCCGCGCCTGTGGGGCGCGTTTCCGCGCGTGCTGGCGCGCTACTGGCGCGAGGAGAAACTGTTTTCGCTG
GAAACCGCCATCTACAAAATGACCGGCCTGTCGGCCCGCAATTTCCGCCTGCACCAGCGCGGCCAGCTGCAGCCCGGCTG
GCATGCCGATGTAGTGGTGCTGGATCCGGCCCGCGTGCGCGACGTGGCCACCTACGAGAACCCGATCGCGCTGTCTGAAG
GCATCGAGAAGGTGTTTGTCAACGGCGAACTGGCCTATGTGGCCGGCTCCGCCGATGCGGCCAACGCCAAGGTGCAGGCG
CGCGCTGGCCGGTTGCTAAAACGGCACGTAACCCAGCCCTGA

Upstream 100 bases:

>100_bases
GCGGCGTGCGCGACGTGCTCAGCACGCGCGGCGTGGACATGCGGCACTATCCCAGGCTCGATTGGGACACGGTCACCGCC
GTCAAGGAAAGCAAACTCAA

Downstream 100 bases:

>100_bases
AAAGGTTCCCCGCCCAGCAGGGGCCGCGGGACTGGCTTTGCCAGACCGCAGGCGCAGCGCCCCCTCGGGGGGCAGCGAAC
CACACGAAGTGGGGAGCGTG

Product: dihydroorotase

Products: NA

Alternate protein names: N-acyl-D-amino-acid deacylase [H]

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MTRATLLESGLVIDGTGAEGWIGDVLLMDGRIAALGKNLSDQLPEGLKPEEVARIDCTGLAIAPGFIDVHTHDDAIVLKQ
PDMLPKVSQGITTVITGNCGISLLPFIVDNPEPPLNLLGADSFRFDSVQSYERAIIQAQPAVNVAVLIGHTTLRFACMGD
LTRAASASELDAMCALLTQCMESGATGMSSGLFYEPAFAAPAQEVVRLAQVVSRFGGVYSTHLRDEMATIVEALHEAGDT
AFSAGVPLIVSHHKCAGPANWGRTQQTLPLIESLARRQPVAMDVYPYVAGSTVLREDLVDGVIDVLVSWSTPHPEMTGRT
LASIAAEWGVDQKAVCRRLQPGGACYFQMHEDDVRRVVAHPLTMIGSDGLPHDQHPHPRLWGAFPRVLARYWREEKLFSL
ETAIYKMTGLSARNFRLHQRGQLQPGWHADVVVLDPARVRDVATYENPIALSEGIEKVFVNGELAYVAGSADAANAKVQA
RAGRLLKRHVTQP

Sequences:

>Translated_493_residues
MTRATLLESGLVIDGTGAEGWIGDVLLMDGRIAALGKNLSDQLPEGLKPEEVARIDCTGLAIAPGFIDVHTHDDAIVLKQ
PDMLPKVSQGITTVITGNCGISLLPFIVDNPEPPLNLLGADSFRFDSVQSYERAIIQAQPAVNVAVLIGHTTLRFACMGD
LTRAASASELDAMCALLTQCMESGATGMSSGLFYEPAFAAPAQEVVRLAQVVSRFGGVYSTHLRDEMATIVEALHEAGDT
AFSAGVPLIVSHHKCAGPANWGRTQQTLPLIESLARRQPVAMDVYPYVAGSTVLREDLVDGVIDVLVSWSTPHPEMTGRT
LASIAAEWGVDQKAVCRRLQPGGACYFQMHEDDVRRVVAHPLTMIGSDGLPHDQHPHPRLWGAFPRVLARYWREEKLFSL
ETAIYKMTGLSARNFRLHQRGQLQPGWHADVVVLDPARVRDVATYENPIALSEGIEKVFVNGELAYVAGSADAANAKVQA
RAGRLLKRHVTQP
>Mature_492_residues
TRATLLESGLVIDGTGAEGWIGDVLLMDGRIAALGKNLSDQLPEGLKPEEVARIDCTGLAIAPGFIDVHTHDDAIVLKQP
DMLPKVSQGITTVITGNCGISLLPFIVDNPEPPLNLLGADSFRFDSVQSYERAIIQAQPAVNVAVLIGHTTLRFACMGDL
TRAASASELDAMCALLTQCMESGATGMSSGLFYEPAFAAPAQEVVRLAQVVSRFGGVYSTHLRDEMATIVEALHEAGDTA
FSAGVPLIVSHHKCAGPANWGRTQQTLPLIESLARRQPVAMDVYPYVAGSTVLREDLVDGVIDVLVSWSTPHPEMTGRTL
ASIAAEWGVDQKAVCRRLQPGGACYFQMHEDDVRRVVAHPLTMIGSDGLPHDQHPHPRLWGAFPRVLARYWREEKLFSLE
TAIYKMTGLSARNFRLHQRGQLQPGWHADVVVLDPARVRDVATYENPIALSEGIEKVFVNGELAYVAGSADAANAKVQAR
AGRLLKRHVTQP

Specific function: Has a wide specificity; hydrolyzes N-acyl derivative of neutral D-amino acids [H]

COG id: COG3653

COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR023100
- InterPro:   IPR012855
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3; PF07908 D-aminoacyl_C [H]

EC number: =3.5.1.81 [H]

Molecular weight: Translated: 53341; Mature: 53209

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRATLLESGLVIDGTGAEGWIGDVLLMDGRIAALGKNLSDQLPEGLKPEEVARIDCTGL
CCCHHHHHCCCEEECCCCCCCCCCEEEECCCHHHHCCCHHHHCCCCCCHHHHEEEEECCE
AIAPGFIDVHTHDDAIVLKQPDMLPKVSQGITTVITGNCGISLLPFIVDNPEPPLNLLGA
EECCCEEEEEECCCEEEEECCCCCCHHHCCCEEEEECCCCCEEEEEEECCCCCCCEECCC
DSFRFDSVQSYERAIIQAQPAVNVAVLIGHTTLRFACMGDLTRAASASELDAMCALLTQC
CCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
MESGATGMSSGLFYEPAFAAPAQEVVRLAQVVSRFGGVYSTHLRDEMATIVEALHEAGDT
HHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
AFSAGVPLIVSHHKCAGPANWGRTQQTLPLIESLARRQPVAMDVYPYVAGSTVLREDLVD
HHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCHHCCHHHHHHHHHH
GVIDVLVSWSTPHPEMTGRTLASIAAEWGVDQKAVCRRLQPGGACYFQMHEDDVRRVVAH
HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECHHHHHHHHHH
PLTMIGSDGLPHDQHPHPRLWGAFPRVLARYWREEKLFSLETAIYKMTGLSARNFRLHQR
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCC
GQLQPGWHADVVVLDPARVRDVATYENPIALSEGIEKVFVNGELAYVAGSADAANAKVQA
CCCCCCCCCCEEEECCHHHHHHHHCCCCCHHHHCCCEEEECCEEEEEECCCCCCCCCHHH
RAGRLLKRHVTQP
HHHHHHHHHCCCC
>Mature Secondary Structure 
TRATLLESGLVIDGTGAEGWIGDVLLMDGRIAALGKNLSDQLPEGLKPEEVARIDCTGL
CCHHHHHCCCEEECCCCCCCCCCEEEECCCHHHHCCCHHHHCCCCCCHHHHEEEEECCE
AIAPGFIDVHTHDDAIVLKQPDMLPKVSQGITTVITGNCGISLLPFIVDNPEPPLNLLGA
EECCCEEEEEECCCEEEEECCCCCCHHHCCCEEEEECCCCCEEEEEEECCCCCCCEECCC
DSFRFDSVQSYERAIIQAQPAVNVAVLIGHTTLRFACMGDLTRAASASELDAMCALLTQC
CCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
MESGATGMSSGLFYEPAFAAPAQEVVRLAQVVSRFGGVYSTHLRDEMATIVEALHEAGDT
HHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
AFSAGVPLIVSHHKCAGPANWGRTQQTLPLIESLARRQPVAMDVYPYVAGSTVLREDLVD
HHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCHHCCHHHHHHHHHH
GVIDVLVSWSTPHPEMTGRTLASIAAEWGVDQKAVCRRLQPGGACYFQMHEDDVRRVVAH
HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECHHHHHHHHHH
PLTMIGSDGLPHDQHPHPRLWGAFPRVLARYWREEKLFSLETAIYKMTGLSARNFRLHQR
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCC
GQLQPGWHADVVVLDPARVRDVATYENPIALSEGIEKVFVNGELAYVAGSADAANAKVQA
CCCCCCCCCCEEEECCHHHHHHHHCCCCCHHHHCCCEEEECCEEEEEECCCCCCCCCHHH
RAGRLLKRHVTQP
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8541651 [H]