| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91786571
Identifier: 91786571
GI number: 91786571
Start: 678707
End: 679696
Strand: Direct
Name: 91786571
Synonym: Bpro_0666
Alternate gene names: NA
Gene position: 678707-679696 (Clockwise)
Preceding gene: 91786568
Following gene: 91786573
Centisome position: 13.05
GC content: 66.26
Gene sequence:
>990_bases ATGTCCAAAGCCTTCGCCTCGCAGTCCGACCTGACGGACAAGACCATCACCTTTGAGCAGCTCAGCGCCCACTGCTGGGC CTACACCGCCGAGGGCGACCCGAACTCGGGCGTGATCATCGGCGACAAATTCATCATGGTGAGCGACGCCACGGCCACGC CCGCCATGGCGCAGGACCTGATCGCGCGCATCCGCACCATCAGCGACAAACCCATCAAGTACGTGCTGCTGACGCACTAC CACGCCGTCCGCGTGCTGGGCGCCAGCGCCTACTTTGCCGAAGGCGCGACTGAAGTGATCGCGAGCCAGGGCACCTGTGA GCTGATTGCTGAGCGCGGCGCGCAGGACATGCAAAGCGAGATGGAGCGCTTTCCGCGCCTCTTTCGCAACGCCGAGAGCG TGCCCGGCCTGACCTGGCCCACCCTGGTCATTGCCGGCGGCAACCCCGCCAAAGGGGAGGTGCCGGGCAGGCTGGTGCTG GACCTCGGCGGCGTCAAGGTGCAGATCTGGCACCCGGGCCCGGGCCACACGCGCGGCGACACCATCGCCTGGGTCGAAGA AGAAAAAGTGCTGTTCTCGGGCGACCTGGTCGAATACGAAGCCGGCGTGTACACCGGCGATGCGCAGCTGGAGGAATGGC CCGCCACACTCGAGGCCCTGCGTGCGCTGAAGGCCGAGGCCATCGTGCCCGGCCGCGGCGAGGCGATGAAGGGCGCCGCC AACGTCAACAAGGCGCTGGACTACACCAGGCGCTGGGTCGAGACCCTCTATCAGGCGGGCAAGGAGGCCGCCGCTGCCGG CATGGACCTGAAAGCGGCGATGGACCACACCCGCAGGAGCATGGACCCGGTGTTTGGCCACGTATTCATTTACGAACACT GCCTGCCGTTTGATGTGAGCCGCGCCTTTGATGAAGCCAGCGGCATCAAGAACCCGCGCATCTGGACGGCCGAGCGGGAC AGGGAGATGTGGGCTGCGCTGCAGGGGTGA
Upstream 100 bases:
>100_bases CTGATTACGTTTACGTAAAATGGCGTGCATTCGCCACCGCAGCGCCCTGGGCGGTATTGAGCAGCATTGAGCGGCCCCCA CACCGGAAAACAGGAACCCC
Downstream 100 bases:
>100_bases GCTACACCACAAGCCTGGCTTGTCAAGGCGCGGGCCCTGCGCCTGGGTCTGGTTCAGGAATCAAGATCCAGCGTGGAGAG AATTTCCACAAAGGCATCAA
Product: beta-lactamase-like protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta Lactamase; Beta-Lactamase-Like; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like Protein; Beta-Lactamase; Zn-Dependent Hydrolase; Hydrolase; Cyclase; Metallo-Beta-Lactamase Superfamily; Alkyl Sulfatase Or Beta-Lactamase; Beta Lactamase SoxH-Like Protein; Zn-Dependent Hydrolase Glyoxylase; Metallo-Beta-Lactamase; Glyoxylase-Like Zinc-Dependent Hydrolase; Beta-Lactamase Class B; Cyclase/Dehydrase; Beta-Lactamase Domain Containing Protein; Rhodanese Domain Protein
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSKAFASQSDLTDKTITFEQLSAHCWAYTAEGDPNSGVIIGDKFIMVSDATATPAMAQDLIARIRTISDKPIKYVLLTHY HAVRVLGASAYFAEGATEVIASQGTCELIAERGAQDMQSEMERFPRLFRNAESVPGLTWPTLVIAGGNPAKGEVPGRLVL DLGGVKVQIWHPGPGHTRGDTIAWVEEEKVLFSGDLVEYEAGVYTGDAQLEEWPATLEALRALKAEAIVPGRGEAMKGAA NVNKALDYTRRWVETLYQAGKEAAAAGMDLKAAMDHTRRSMDPVFGHVFIYEHCLPFDVSRAFDEASGIKNPRIWTAERD REMWAALQG
Sequences:
>Translated_329_residues MSKAFASQSDLTDKTITFEQLSAHCWAYTAEGDPNSGVIIGDKFIMVSDATATPAMAQDLIARIRTISDKPIKYVLLTHY HAVRVLGASAYFAEGATEVIASQGTCELIAERGAQDMQSEMERFPRLFRNAESVPGLTWPTLVIAGGNPAKGEVPGRLVL DLGGVKVQIWHPGPGHTRGDTIAWVEEEKVLFSGDLVEYEAGVYTGDAQLEEWPATLEALRALKAEAIVPGRGEAMKGAA NVNKALDYTRRWVETLYQAGKEAAAAGMDLKAAMDHTRRSMDPVFGHVFIYEHCLPFDVSRAFDEASGIKNPRIWTAERD REMWAALQG >Mature_328_residues SKAFASQSDLTDKTITFEQLSAHCWAYTAEGDPNSGVIIGDKFIMVSDATATPAMAQDLIARIRTISDKPIKYVLLTHYH AVRVLGASAYFAEGATEVIASQGTCELIAERGAQDMQSEMERFPRLFRNAESVPGLTWPTLVIAGGNPAKGEVPGRLVLD LGGVKVQIWHPGPGHTRGDTIAWVEEEKVLFSGDLVEYEAGVYTGDAQLEEWPATLEALRALKAEAIVPGRGEAMKGAAN VNKALDYTRRWVETLYQAGKEAAAAGMDLKAAMDHTRRSMDPVFGHVFIYEHCLPFDVSRAFDEASGIKNPRIWTAERDR EMWAALQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35987; Mature: 35856
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAFASQSDLTDKTITFEQLSAHCWAYTAEGDPNSGVIIGDKFIMVSDATATPAMAQDL CCCCCCCCCCCCCCEEEHHHHHCEEEEEECCCCCCCCEEEECEEEEEECCCCCHHHHHHH IARIRTISDKPIKYVLLTHYHAVRVLGASAYFAEGATEVIASQGTCELIAERGAQDMQSE HHHHHHCCCCCEEEEEEHHHHHHHHHCCHHHHHCCHHHHHHCCCHHHHHHHCCHHHHHHH MERFPRLFRNAESVPGLTWPTLVIAGGNPAKGEVPGRLVLDLGGVKVQIWHPGPGHTRGD HHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCC TIAWVEEEKVLFSGDLVEYEAGVYTGDAQLEEWPATLEALRALKAEAIVPGRGEAMKGAA EEEEEECCEEEEECCEEEEECCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHH NVNKALDYTRRWVETLYQAGKEAAAAGMDLKAAMDHTRRSMDPVFGHVFIYEHCLPFDVS HHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH RAFDEASGIKNPRIWTAERDREMWAALQG HHHHHHHCCCCCCEEECCHHHHHHHHCCC >Mature Secondary Structure SKAFASQSDLTDKTITFEQLSAHCWAYTAEGDPNSGVIIGDKFIMVSDATATPAMAQDL CCCCCCCCCCCCCEEEHHHHHCEEEEEECCCCCCCCEEEECEEEEEECCCCCHHHHHHH IARIRTISDKPIKYVLLTHYHAVRVLGASAYFAEGATEVIASQGTCELIAERGAQDMQSE HHHHHHCCCCCEEEEEEHHHHHHHHHCCHHHHHCCHHHHHHCCCHHHHHHHCCHHHHHHH MERFPRLFRNAESVPGLTWPTLVIAGGNPAKGEVPGRLVLDLGGVKVQIWHPGPGHTRGD HHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCC TIAWVEEEKVLFSGDLVEYEAGVYTGDAQLEEWPATLEALRALKAEAIVPGRGEAMKGAA EEEEEECCEEEEECCEEEEECCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHH NVNKALDYTRRWVETLYQAGKEAAAAGMDLKAAMDHTRRSMDPVFGHVFIYEHCLPFDVS HHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH RAFDEASGIKNPRIWTAERDREMWAALQG HHHHHHHCCCCCCEEECCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA