| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is hexR [C]
Identifier: 91786567
GI number: 91786567
Start: 673873
End: 674784
Strand: Direct
Name: hexR [C]
Synonym: Bpro_0662
Alternate gene names: 91786567
Gene position: 673873-674784 (Clockwise)
Preceding gene: 91786566
Following gene: 91786568
Centisome position: 12.96
GC content: 66.78
Gene sequence:
>912_bases ATGACTTCCAAAGTGCTTGCCAAAATTGCCGAGGTCATCGCAATCGCGCCCACCTCCCGGCGCAAGGTGCTGGCGCTGAT CCTGCAAGACCCGCAACGGGTGCTCGATGAAAGTTTTGAGCAGCTGGCGCAGCGCGCCGGCAGCTCGGTGCCCACGGTGA TGCGCACCTGCCGCGATCTGGGCTACCCGGGCCTGCGCGAGTTCAAGCTCGCGCTGGCGCAGGAAATGGCCGTCAGCGGC TCGCCCCTGCACCGCCGGGTGCAGCTGCATGACGACGCAGAGGAGGTCATCTCCAAGGTCATCAAGGGTGCGGCCACGGC CGTCAGCGGCGTGCAGGCCCAGCTCAGCGTGGCTGCGGTGGAGGCGGCGGCCGACGCCATCGTGCGTGCCAGCCGGGTCG ATTGCTACAGCGTCGGCGTGACCTCCAGCTTCATGGCCTCCGACATGCAGGCCCGGCTGTTCCGGCTGGGGCTGGTGTCC AACGCCTACCTCGACATTCATTTGCAGCTGGTGTCCGCGGCCACCATCGGCAAGCAGGGCGTGGTGTTTGCCATCTCGCA CGTGGGCGGCATGCCGTCGTTGCTCGAAGCGGTAGACGTGGCCCGCTCGCAAGGCGCCACGGTGATCGCCCTGACCCAGC AGGGGACCGCGCTGGCCGAGCGGGCCGACATTGTGCTCGGCATCCATGTGCCGGAAGACCCGGTCATGCATGTGGGCACC GAGGCCTACCTGGTCCACCTCACCGTGATTGAAATCGTCACCGTGCTGGTGGCGCAGCGCCTGGGTGACCTGGCCGTCAA ACGCCTGGGCGGCGTGCGCGACGTGCTCAGCACGCGCGGCGTGGACATGCGGCACTATCCCAGGCTCGATTGGGACACGG TCACCGCCGTCAAGGAAAGCAAACTCAAATGA
Upstream 100 bases:
>100_bases TGGATGAGAACTACACCGTGTGCGATGCCCTCGTAACCTGTTTCTGATTTTTTGATGTTCCCCTGCTTTTGATGTTCCCC TACCTTTCCTACCTCACGCC
Downstream 100 bases:
>100_bases CACGTGCGACCCTGCTTGAAAGCGGGCTGGTGATTGACGGTACCGGTGCTGAAGGCTGGATTGGCGACGTTCTGCTGATG GACGGCCGTATTGCGGCGCT
Product: RpiR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTSKVLAKIAEVIAIAPTSRRKVLALILQDPQRVLDESFEQLAQRAGSSVPTVMRTCRDLGYPGLREFKLALAQEMAVSG SPLHRRVQLHDDAEEVISKVIKGAATAVSGVQAQLSVAAVEAAADAIVRASRVDCYSVGVTSSFMASDMQARLFRLGLVS NAYLDIHLQLVSAATIGKQGVVFAISHVGGMPSLLEAVDVARSQGATVIALTQQGTALAERADIVLGIHVPEDPVMHVGT EAYLVHLTVIEIVTVLVAQRLGDLAVKRLGGVRDVLSTRGVDMRHYPRLDWDTVTAVKESKLK
Sequences:
>Translated_303_residues MTSKVLAKIAEVIAIAPTSRRKVLALILQDPQRVLDESFEQLAQRAGSSVPTVMRTCRDLGYPGLREFKLALAQEMAVSG SPLHRRVQLHDDAEEVISKVIKGAATAVSGVQAQLSVAAVEAAADAIVRASRVDCYSVGVTSSFMASDMQARLFRLGLVS NAYLDIHLQLVSAATIGKQGVVFAISHVGGMPSLLEAVDVARSQGATVIALTQQGTALAERADIVLGIHVPEDPVMHVGT EAYLVHLTVIEIVTVLVAQRLGDLAVKRLGGVRDVLSTRGVDMRHYPRLDWDTVTAVKESKLK >Mature_302_residues TSKVLAKIAEVIAIAPTSRRKVLALILQDPQRVLDESFEQLAQRAGSSVPTVMRTCRDLGYPGLREFKLALAQEMAVSGS PLHRRVQLHDDAEEVISKVIKGAATAVSGVQAQLSVAAVEAAADAIVRASRVDCYSVGVTSSFMASDMQARLFRLGLVSN AYLDIHLQLVSAATIGKQGVVFAISHVGGMPSLLEAVDVARSQGATVIALTQQGTALAERADIVLGIHVPEDPVMHVGTE AYLVHLTVIEIVTVLVAQRLGDLAVKRLGGVRDVLSTRGVDMRHYPRLDWDTVTAVKESKLK
Specific function: Represses The Expression Of The Hex Regulon (Zwf, Eda, Glp And Gap) (By Similarity). [C]
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI1788159, Length=280, Percent_Identity=31.7857142857143, Blast_Score=124, Evalue=7e-30, Organism=Escherichia coli, GI87082369, Length=229, Percent_Identity=24.8908296943231, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000281 - InterPro: IPR001347 - InterPro: IPR011991 [H]
Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 32416; Mature: 32285
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKVLAKIAEVIAIAPTSRRKVLALILQDPQRVLDESFEQLAQRAGSSVPTVMRTCRDL CCHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC GYPGLREFKLALAQEMAVSGSPLHRRVQLHDDAEEVISKVIKGAATAVSGVQAQLSVAAV CCCCHHHHHHHHHHHHHCCCCCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAAADAIVRASRVDCYSVGVTSSFMASDMQARLFRLGLVSNAYLDIHLQLVSAATIGKQG HHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHCCCCC VVFAISHVGGMPSLLEAVDVARSQGATVIALTQQGTALAERADIVLGIHVPEDPVMHVGT CEEEEHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCEEEEEECCCCCCEECCC EAYLVHLTVIEIVTVLVAQRLGDLAVKRLGGVRDVLSTRGVDMRHYPRLDWDTVTAVKES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHH KLK CCC >Mature Secondary Structure TSKVLAKIAEVIAIAPTSRRKVLALILQDPQRVLDESFEQLAQRAGSSVPTVMRTCRDL CHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC GYPGLREFKLALAQEMAVSGSPLHRRVQLHDDAEEVISKVIKGAATAVSGVQAQLSVAAV CCCCHHHHHHHHHHHHHCCCCCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAAADAIVRASRVDCYSVGVTSSFMASDMQARLFRLGLVSNAYLDIHLQLVSAATIGKQG HHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHCCCCC VVFAISHVGGMPSLLEAVDVARSQGATVIALTQQGTALAERADIVLGIHVPEDPVMHVGT CEEEEHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCEEEEEECCCCCCEECCC EAYLVHLTVIEIVTVLVAQRLGDLAVKRLGGVRDVLSTRGVDMRHYPRLDWDTVTAVKES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHH KLK CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]