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The map label for this gene is yddQ [C]

Identifier: 91786563

GI number: 91786563

Start: 669573

End: 670412

Strand: Direct

Name: yddQ [C]

Synonym: Bpro_0658

Alternate gene names: 91786563

Gene position: 669573-670412 (Clockwise)

Preceding gene: 91786562

Following gene: 91786564

Centisome position: 12.88

GC content: 65.12

Gene sequence:

>840_bases
ATGAAAATTCCGCTCACTCTCAAAAAACTGTTCCGGCGCCGCATCGTGCTGGCCGCCGGCATCTGCCTGCTGGTCGTGGT
GGCGGTCGCCCTGCTGGCCAACGTGATCACGGGCTACGACCCGAATGAAACCGCGGTGCGCGAGCGCCTGTCGGTGCCGA
CGGTCAGCCATCTGATGGGCACCGACGAGCTGGGCCGCGACCTGTTTGCGCGCATTGCCTTCGGCGGCCGCTATTCGCTC
ACGATTGCCGCGCTGACCGCCATGGGCGCTATTGTGTTCGGCACGCTGTTCGGCCTGGTGGCGGGTTTTTTCCGGCGGCT
GGACGCGCCCATCATGCGGGTCGTGGACGCCATGATGTCTTTGCCCGACATCCTGCTGGCCATTGCCCTGGTGGCCATTT
TGGGCCCCTCCATGCTCAATGTGGTGCTGGCTCTGGTGCTGGTGTACTCGCCGCGCGTCGCCCGCGTGGTCCGCGCCTCG
ACGCTGGTCGTGCGTGAACTGCTGTTTGTCGAAGCGGCGCGGGCCGTGGGTGTGTCGACGCCCCGCATCCTGTGGCGCCA
CATCCTGCCCAACCTGATGTCGCCCATCCTGGTGCAGGCCTCGTTCATCTTTGCCTATGCCATTTTGGCGGAGGCCGCCC
TGTCTTTCCTCGGTGTGGGTGTGCCGCCCGAGATTCCGACCTGGGGCACCATGGTGGCCGGCAGCCAGCAGTATGCGCAT
GAAGCGCTCTGGATCGTTTTATTTCCCGGCCTCGCCATCATCCTGACCGCGCTGTCGCTGCAGTTGCTGGGCGACGGTGT
GCGCGACCTGCTGGATCCGCGGCTCAAGAAGTCGCTGTGA

Upstream 100 bases:

>100_bases
AGGGTGCCCTGCTGGTCGTTTCCATGATTTATGTGGTGATCAATTTCCTGACCGACCTGCTTTATATGGTGGTCGATCCC
CGCGTCAAATACTGATCGCC

Downstream 100 bases:

>100_bases
ACAATCAGAGGCCAGACCCCATGAATTCGCCCATCACCTCTTCCAATGCGCCGTCTACCGCGTCGATTACCCCGCGGCTC
GATGTCCGCCATCTGAGCAC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKIPLTLKKLFRRRIVLAAGICLLVVVAVALLANVITGYDPNETAVRERLSVPTVSHLMGTDELGRDLFARIAFGGRYSL
TIAALTAMGAIVFGTLFGLVAGFFRRLDAPIMRVVDAMMSLPDILLAIALVAILGPSMLNVVLALVLVYSPRVARVVRAS
TLVVRELLFVEAARAVGVSTPRILWRHILPNLMSPILVQASFIFAYAILAEAALSFLGVGVPPEIPTWGTMVAGSQQYAH
EALWIVLFPGLAIILTALSLQLLGDGVRDLLDPRLKKSL

Sequences:

>Translated_279_residues
MKIPLTLKKLFRRRIVLAAGICLLVVVAVALLANVITGYDPNETAVRERLSVPTVSHLMGTDELGRDLFARIAFGGRYSL
TIAALTAMGAIVFGTLFGLVAGFFRRLDAPIMRVVDAMMSLPDILLAIALVAILGPSMLNVVLALVLVYSPRVARVVRAS
TLVVRELLFVEAARAVGVSTPRILWRHILPNLMSPILVQASFIFAYAILAEAALSFLGVGVPPEIPTWGTMVAGSQQYAH
EALWIVLFPGLAIILTALSLQLLGDGVRDLLDPRLKKSL
>Mature_279_residues
MKIPLTLKKLFRRRIVLAAGICLLVVVAVALLANVITGYDPNETAVRERLSVPTVSHLMGTDELGRDLFARIAFGGRYSL
TIAALTAMGAIVFGTLFGLVAGFFRRLDAPIMRVVDAMMSLPDILLAIALVAILGPSMLNVVLALVLVYSPRVARVVRAS
TLVVRELLFVEAARAVGVSTPRILWRHILPNLMSPILVQASFIFAYAILAEAALSFLGVGVPPEIPTWGTMVAGSQQYAH
EALWIVLFPGLAIILTALSLQLLGDGVRDLLDPRLKKSL

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=240, Percent_Identity=42.5, Blast_Score=191, Evalue=5e-50,
Organism=Escherichia coli, GI1789964, Length=257, Percent_Identity=45.5252918287938, Blast_Score=189, Evalue=1e-49,
Organism=Escherichia coli, GI1787054, Length=271, Percent_Identity=38.3763837638376, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1787498, Length=270, Percent_Identity=33.7037037037037, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1789889, Length=241, Percent_Identity=34.0248962655602, Blast_Score=134, Evalue=5e-33,
Organism=Escherichia coli, GI1787549, Length=215, Percent_Identity=34.8837209302326, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI1788505, Length=226, Percent_Identity=31.858407079646, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30086; Mature: 30086

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPLTLKKLFRRRIVLAAGICLLVVVAVALLANVITGYDPNETAVRERLSVPTVSHLMG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHC
TDELGRDLFARIAFGGRYSLTIAALTAMGAIVFGTLFGLVAGFFRRLDAPIMRVVDAMMS
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
LPDILLAIALVAILGPSMLNVVLALVLVYSPRVARVVRASTLVVRELLFVEAARAVGVST
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PRILWRHILPNLMSPILVQASFIFAYAILAEAALSFLGVGVPPEIPTWGTMVAGSQQYAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHH
EALWIVLFPGLAIILTALSLQLLGDGVRDLLDPRLKKSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC
>Mature Secondary Structure
MKIPLTLKKLFRRRIVLAAGICLLVVVAVALLANVITGYDPNETAVRERLSVPTVSHLMG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHC
TDELGRDLFARIAFGGRYSLTIAALTAMGAIVFGTLFGLVAGFFRRLDAPIMRVVDAMMS
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
LPDILLAIALVAILGPSMLNVVLALVLVYSPRVARVVRASTLVVRELLFVEAARAVGVST
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PRILWRHILPNLMSPILVQASFIFAYAILAEAALSFLGVGVPPEIPTWGTMVAGSQQYAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHH
EALWIVLFPGLAIILTALSLQLLGDGVRDLLDPRLKKSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA