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The map label for this gene is yliC [C]

Identifier: 91786562

GI number: 91786562

Start: 668626

End: 669567

Strand: Direct

Name: yliC [C]

Synonym: Bpro_0657

Alternate gene names: 91786562

Gene position: 668626-669567 (Clockwise)

Preceding gene: 91786561

Following gene: 91786563

Centisome position: 12.86

GC content: 62.63

Gene sequence:

>942_bases
ATGACCCGATATTTGTTGTCACGCATCATGGGCATGCTGGTCGTCATGGCGCTCGTGGCGGTCCTCGTGTTTGTGCTCAC
GCGCGCCGCGTCGGGTGACCCCGTCACGGTGCTGCTGGGCGACCAGGCCACGGCCGAAGACATTGCCCGCGTACAAAAAG
AGTATGGCCTGGACAAACCGCTGCCGGTGCAGTTCGGCTACTGGCTCAAGGAGCTGTCGCAGGGCAACCTCGGGCAGTCC
ATTTTTTTGCAGCGCCCGGTCACGCAGGCGCTGTGGGAGCGGGCCGAGCCCACGACCCTGCTGGCGCTGCTGTCCCTCTT
CATCGCCGCGGCGATTGGTGTGCCTTGCGGCATTGTCTCGGCGGTCTTTCGCGGCAAGTTCATCGACCAGCTGCTCACCG
GTTTTGCCATGCTGGGTGCCAGCATTCCCAGCTTCTGGTTCGGCTTGGTGCTGATGCAGATTTTTGCGGTGTCCATGGGC
TGGTTTCCGGTGTCCGGCTACGGTGACCCGGGTGCCACCTTGATGGCGCGCATCCATTACCTGGTGCTGCCTTCGGTGGT
GCTGGGCGTGCTCAACTCCGCGCTGATCATCCGCTTCACGCGCGCTTCCATGCTCGACGTGCTGGGTGAAGACTATGTGC
GCACGGCCCGGGCCAAGGGCCTGTCTGAAAAAGTCGTCGTGCTCAAGCATGCGCTGCGCAACGCGCTGGTGCCCATCGTC
ACGGTGTTGGGCCTGACCGTGGCGCTGCTGATCGGCGGCGCGGTGGTGACCGAAACCGTGTTTGGCCTGCCGGGTGTCGG
CAACCTGGTGGTGAGCGCCGTGCTGCGCCGCGATTACCCGGTGATTCAGGGTGCCCTGCTGGTCGTTTCCATGATTTATG
TGGTGATCAATTTCCTGACCGACCTGCTTTATATGGTGGTCGATCCCCGCGTCAAATACTGA

Upstream 100 bases:

>100_bases
GGCTTTTGTTTCGCTTCGTTTTGGGCCGGGTTTAGTGATGTTGACGGGGACACCCTCGAATGGATAAAAAGCATTCCCCC
CTTTTGGATAGAACAAGGTT

Downstream 100 bases:

>100_bases
TCGCCATGAAAATTCCGCTCACTCTCAAAAAACTGTTCCGGCGCCGCATCGTGCTGGCCGCCGGCATCTGCCTGCTGGTC
GTGGTGGCGGTCGCCCTGCT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MTRYLLSRIMGMLVVMALVAVLVFVLTRAASGDPVTVLLGDQATAEDIARVQKEYGLDKPLPVQFGYWLKELSQGNLGQS
IFLQRPVTQALWERAEPTTLLALLSLFIAAAIGVPCGIVSAVFRGKFIDQLLTGFAMLGASIPSFWFGLVLMQIFAVSMG
WFPVSGYGDPGATLMARIHYLVLPSVVLGVLNSALIIRFTRASMLDVLGEDYVRTARAKGLSEKVVVLKHALRNALVPIV
TVLGLTVALLIGGAVVTETVFGLPGVGNLVVSAVLRRDYPVIQGALLVVSMIYVVINFLTDLLYMVVDPRVKY

Sequences:

>Translated_313_residues
MTRYLLSRIMGMLVVMALVAVLVFVLTRAASGDPVTVLLGDQATAEDIARVQKEYGLDKPLPVQFGYWLKELSQGNLGQS
IFLQRPVTQALWERAEPTTLLALLSLFIAAAIGVPCGIVSAVFRGKFIDQLLTGFAMLGASIPSFWFGLVLMQIFAVSMG
WFPVSGYGDPGATLMARIHYLVLPSVVLGVLNSALIIRFTRASMLDVLGEDYVRTARAKGLSEKVVVLKHALRNALVPIV
TVLGLTVALLIGGAVVTETVFGLPGVGNLVVSAVLRRDYPVIQGALLVVSMIYVVINFLTDLLYMVVDPRVKY
>Mature_312_residues
TRYLLSRIMGMLVVMALVAVLVFVLTRAASGDPVTVLLGDQATAEDIARVQKEYGLDKPLPVQFGYWLKELSQGNLGQSI
FLQRPVTQALWERAEPTTLLALLSLFIAAAIGVPCGIVSAVFRGKFIDQLLTGFAMLGASIPSFWFGLVLMQIFAVSMGW
FPVSGYGDPGATLMARIHYLVLPSVVLGVLNSALIIRFTRASMLDVLGEDYVRTARAKGLSEKVVVLKHALRNALVPIVT
VLGLTVALLIGGAVVTETVFGLPGVGNLVVSAVLRRDYPVIQGALLVVSMIYVVINFLTDLLYMVVDPRVKY

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=313, Percent_Identity=41.85303514377, Blast_Score=258, Evalue=3e-70,
Organism=Escherichia coli, GI1789965, Length=338, Percent_Identity=37.8698224852071, Blast_Score=238, Evalue=3e-64,
Organism=Escherichia coli, GI1789888, Length=315, Percent_Identity=36.1904761904762, Blast_Score=199, Evalue=3e-52,
Organism=Escherichia coli, GI1787761, Length=328, Percent_Identity=38.109756097561, Blast_Score=187, Evalue=6e-49,
Organism=Escherichia coli, GI1787497, Length=315, Percent_Identity=32.6984126984127, Blast_Score=182, Evalue=4e-47,
Organism=Escherichia coli, GI1787550, Length=266, Percent_Identity=29.3233082706767, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1788504, Length=278, Percent_Identity=29.8561151079137, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33853; Mature: 33722

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRYLLSRIMGMLVVMALVAVLVFVLTRAASGDPVTVLLGDQATAEDIARVQKEYGLDKP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCC
LPVQFGYWLKELSQGNLGQSIFLQRPVTQALWERAEPTTLLALLSLFIAAAIGVPCGIVS
CCCHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHH
AVFRGKFIDQLLTGFAMLGASIPSFWFGLVLMQIFAVSMGWFPVSGYGDPGATLMARIHY
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHH
LVLPSVVLGVLNSALIIRFTRASMLDVLGEDYVRTARAKGLSEKVVVLKHALRNALVPIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
TVLGLTVALLIGGAVVTETVFGLPGVGNLVVSAVLRRDYPVIQGALLVVSMIYVVINFLT
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DLLYMVVDPRVKY
HHHHHHHCCCCCC
>Mature Secondary Structure 
TRYLLSRIMGMLVVMALVAVLVFVLTRAASGDPVTVLLGDQATAEDIARVQKEYGLDKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCC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HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424; 8796346 [H]