| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is amn [H]
Identifier: 91786547
GI number: 91786547
Start: 650947
End: 652443
Strand: Reverse
Name: amn [H]
Synonym: Bpro_0642
Alternate gene names: 91786547
Gene position: 652443-650947 (Counterclockwise)
Preceding gene: 91786548
Following gene: 91786539
Centisome position: 12.55
GC content: 65.13
Gene sequence:
>1497_bases ATGCCCTACCTGCCCCCCTTCATTGCCCCGACCCGCTACTCCGACCCCGCTGCCGCGCTGGCGCAGGTGTGTGCCATCTA CGACCAGCAGATTGCGCACCTGCGCGATGCCATGCAGCGCTATGTGGCCGGTGAAACGCTGCCCGGCCATGTGCGCGCCT GCTACCCCTTTGTGCGCGTCCACACCGACACGGTGGCGCGCACCCCGGCCGCCCCCGACAGCGCCCGGCTGAGTTACGGT TTTGTCGCCGGCCCCGGCCGTTTTGAAACCACGCTGACACGCCCCGACCTCTATGGCGACTACTACCTGGAGCAGTTCCG CCTGCTGCTGCAAAACCACCGGGTCGAGCTGGAAATAGGCACCAGCACGCAGCCGATTCCGGTGCATTTTTCGTTTGCCG AACACGACCACATCGAAGGCAACCTGAGCGTGGCGCGCCGCATGCTGATGCGCGATGTGTTTGACCTGCCCGATCTGGCG GCGATGGATGACGGCATTGCCAATGGGACGCACGAGCCCAAGCCTGGCGAACCCCAGCCCTTGTCGCTGTTCACGGCGGC CCGGGTCGATTACTCCTTGCAGCGGCTGCGCCACTACACCGGCACATCGCCCGACTGGTTCCAGAACTTTGTGCTGTTCA CCAATTACCAGTTCTACATTGACGAGTTCGTTCGGCTTGGCCACGAAGAGATGGCCAAGCCCGACAGCGAGTACATCGCC TTTGTCGAGCCCGGCAATGTGGTGACGCGCCGCACCGGCCTGCCCGTTGAAGCAGGTGACGCGCTGGGAACACCACCGCC CCGGCTGCCGCAAATGCCGGGCTACCACCTGATGCGCGCCGACCGCAGCGGCATCACCATGGTCAACATCGGCGTGGGCC CGGCCAACGCCAAGACCATCACCGACCACATTGCCGTGCTGCGACCTCACACCTGGATCATGCTGGGCCACTGCGCGGGC CTGCGCAACAGCCAGCAGCTGGGCGACTACGTGCTGGCCCATGGCTATGTGCGCGAAGACCATGTGCTGGACGAAGAGCT GCCGCTGTGGGTGCCGATCCCGGCGCTGGCCGAAATCCAGGTCGCGCTGGAGCGCGCCGTGGCCGACGTGACCCAAGTCA AGGGCTCGGCGCTCAAAAGCATCATGCGCACCGGTACCGTGGCCTCGACCGACAACCGCAACTGGGAGCTGCTGCCAGCC AACCAGCCGCAGCGCCGCTTCAGCCAGAGCCGGGCCATTGCGCTTGACATGGAAAGCGCCACGATTGCCGCGAACGGCTT CCGCTTTCGCGTCCCTTATGGCACCCTGCTGTGCGTGAGCGACAAGCCGCTACACGGCGAGATCAAACTGCCCGGCATGG CCAACCACTTTTACCGCGAGCGGGTCGATCAGCACCTGCGCATCGGCATCCGCGCGGTGGAACTGCTGCGCGGCGAAGGC ATCGACCAGCTGCACAGCCGCAAGCTCAGGAGCTTTGCCGAGGTGGCGTTTCAGTAA
Upstream 100 bases:
>100_bases GACGGCCGCCGAAGAGTTTGTGACCATGCGGGAGCCGGTCAAGGCCTGAGAGCCTGCGGGCGATAGCTCTATGATGGAAT GAAATCAAGAATCCCCCGCC
Downstream 100 bases:
>100_bases CGGGAACCGGCTGCCGGCGCAACAGGGGTCGCATGGCCAGCAGGCCCAGCACCGGCCCCAGGCCCAGCCAGGGCAGCAGC GATGCCAGCGCATGCCGCTG
Product: AMP nucleosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MPYLPPFIAPTRYSDPAAALAQVCAIYDQQIAHLRDAMQRYVAGETLPGHVRACYPFVRVHTDTVARTPAAPDSARLSYG FVAGPGRFETTLTRPDLYGDYYLEQFRLLLQNHRVELEIGTSTQPIPVHFSFAEHDHIEGNLSVARRMLMRDVFDLPDLA AMDDGIANGTHEPKPGEPQPLSLFTAARVDYSLQRLRHYTGTSPDWFQNFVLFTNYQFYIDEFVRLGHEEMAKPDSEYIA FVEPGNVVTRRTGLPVEAGDALGTPPPRLPQMPGYHLMRADRSGITMVNIGVGPANAKTITDHIAVLRPHTWIMLGHCAG LRNSQQLGDYVLAHGYVREDHVLDEELPLWVPIPALAEIQVALERAVADVTQVKGSALKSIMRTGTVASTDNRNWELLPA NQPQRRFSQSRAIALDMESATIAANGFRFRVPYGTLLCVSDKPLHGEIKLPGMANHFYRERVDQHLRIGIRAVELLRGEG IDQLHSRKLRSFAEVAFQ
Sequences:
>Translated_498_residues MPYLPPFIAPTRYSDPAAALAQVCAIYDQQIAHLRDAMQRYVAGETLPGHVRACYPFVRVHTDTVARTPAAPDSARLSYG FVAGPGRFETTLTRPDLYGDYYLEQFRLLLQNHRVELEIGTSTQPIPVHFSFAEHDHIEGNLSVARRMLMRDVFDLPDLA AMDDGIANGTHEPKPGEPQPLSLFTAARVDYSLQRLRHYTGTSPDWFQNFVLFTNYQFYIDEFVRLGHEEMAKPDSEYIA FVEPGNVVTRRTGLPVEAGDALGTPPPRLPQMPGYHLMRADRSGITMVNIGVGPANAKTITDHIAVLRPHTWIMLGHCAG LRNSQQLGDYVLAHGYVREDHVLDEELPLWVPIPALAEIQVALERAVADVTQVKGSALKSIMRTGTVASTDNRNWELLPA NQPQRRFSQSRAIALDMESATIAANGFRFRVPYGTLLCVSDKPLHGEIKLPGMANHFYRERVDQHLRIGIRAVELLRGEG IDQLHSRKLRSFAEVAFQ >Mature_497_residues PYLPPFIAPTRYSDPAAALAQVCAIYDQQIAHLRDAMQRYVAGETLPGHVRACYPFVRVHTDTVARTPAAPDSARLSYGF VAGPGRFETTLTRPDLYGDYYLEQFRLLLQNHRVELEIGTSTQPIPVHFSFAEHDHIEGNLSVARRMLMRDVFDLPDLAA MDDGIANGTHEPKPGEPQPLSLFTAARVDYSLQRLRHYTGTSPDWFQNFVLFTNYQFYIDEFVRLGHEEMAKPDSEYIAF VEPGNVVTRRTGLPVEAGDALGTPPPRLPQMPGYHLMRADRSGITMVNIGVGPANAKTITDHIAVLRPHTWIMLGHCAGL RNSQQLGDYVLAHGYVREDHVLDEELPLWVPIPALAEIQVALERAVADVTQVKGSALKSIMRTGTVASTDNRNWELLPAN QPQRRFSQSRAIALDMESATIAANGFRFRVPYGTLLCVSDKPLHGEIKLPGMANHFYRERVDQHLRIGIRAVELLRGEGI DQLHSRKLRSFAEVAFQ
Specific function: Involved in regulation of AMP concentrations [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788293, Length=489, Percent_Identity=49.6932515337423, Blast_Score=427, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011271 - InterPro: IPR018953 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF10423 AMNp_N; PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.4 [H]
Molecular weight: Translated: 55777; Mature: 55646
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYLPPFIAPTRYSDPAAALAQVCAIYDQQIAHLRDAMQRYVAGETLPGHVRACYPFVRV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEE HTDTVARTPAAPDSARLSYGFVAGPGRFETTLTRPDLYGDYYLEQFRLLLQNHRVELEIG ECCHHHCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHCCEEEEEEC TSTQPIPVHFSFAEHDHIEGNLSVARRMLMRDVFDLPDLAAMDDGIANGTHEPKPGEPQP CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCC LSLFTAARVDYSLQRLRHYTGTSPDWFQNFVLFTNYQFYIDEFVRLGHEEMAKPDSEYIA EEEHHHHHHHHHHHHHHHHCCCCHHHHHCEEEEECHHHHHHHHHHCCHHHHCCCCCCEEE FVEPGNVVTRRTGLPVEAGDALGTPPPRLPQMPGYHLMRADRSGITMVNIGVGPANAKTI EECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCHHH TDHIAVLRPHTWIMLGHCAGLRNSQQLGDYVLAHGYVREDHVLDEELPLWVPIPALAEIQ HHHHHEECCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCHHHHHH VALERAVADVTQVKGSALKSIMRTGTVASTDNRNWELLPANQPQRRFSQSRAIALDMESA HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCCCHHHHHHCCCEEEEEECCC TIAANGFRFRVPYGTLLCVSDKPLHGEIKLPGMANHFYRERVDQHLRIGIRAVELLRGEG EEEECCEEEECCCCEEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC IDQLHSRKLRSFAEVAFQ HHHHHHHHHHHHHHHHCC >Mature Secondary Structure PYLPPFIAPTRYSDPAAALAQVCAIYDQQIAHLRDAMQRYVAGETLPGHVRACYPFVRV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEE HTDTVARTPAAPDSARLSYGFVAGPGRFETTLTRPDLYGDYYLEQFRLLLQNHRVELEIG ECCHHHCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHCCEEEEEEC TSTQPIPVHFSFAEHDHIEGNLSVARRMLMRDVFDLPDLAAMDDGIANGTHEPKPGEPQP CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCC LSLFTAARVDYSLQRLRHYTGTSPDWFQNFVLFTNYQFYIDEFVRLGHEEMAKPDSEYIA EEEHHHHHHHHHHHHHHHHCCCCHHHHHCEEEEECHHHHHHHHHHCCHHHHCCCCCCEEE FVEPGNVVTRRTGLPVEAGDALGTPPPRLPQMPGYHLMRADRSGITMVNIGVGPANAKTI EECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCHHH TDHIAVLRPHTWIMLGHCAGLRNSQQLGDYVLAHGYVREDHVLDEELPLWVPIPALAEIQ HHHHHEECCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCHHHHHH VALERAVADVTQVKGSALKSIMRTGTVASTDNRNWELLPANQPQRRFSQSRAIALDMESA HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCCCHHHHHHCCCEEEEEECCC TIAANGFRFRVPYGTLLCVSDKPLHGEIKLPGMANHFYRERVDQHLRIGIRAVELLRGEG EEEECCEEEECCCCEEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC IDQLHSRKLRSFAEVAFQ HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]