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The map label for this gene is pcaH [H]

Identifier: 91786532

GI number: 91786532

Start: 634602

End: 635315

Strand: Direct

Name: pcaH [H]

Synonym: Bpro_0627

Alternate gene names: 91786532

Gene position: 634602-635315 (Clockwise)

Preceding gene: 91786530

Following gene: 91786533

Centisome position: 12.2

GC content: 63.73

Gene sequence:

>714_bases
ATGAGCACCGAACTTGACAGCAGCTATCTCGCCCCGCGCGACTGGACCGGCCACCCGTCGCATATTTACCCGTACTACAA
ATCAACCATGCTGCGCGGCCCCAAGCAGCCGCTGGTGCCCATCAAGCAGGCGCTGGCCCAGCTCAACGCGCCGGTCTACG
GTAGCGATCAGCTCGGCCCGCTCGACCATGACCTGACCAAAAACGCGGTCAAAAATGGCGAGCCGCTGGGCGAACGCATC
ATCGTCACCGGCCGCGTGTCGGACGAAGACGGCCGCCCCGTGCGCAACACGCTGGTTGAAGTCTGGCAGGCCAATGCCGC
CGGCCGCTATGTGCACAAGGTGGACCAGCACCACGCGCCTCTGGACCCCAATTTCCTGGGCGCCGGCCGCTGCATGACCG
ATAGCGATGGCCGCTACACCTTCATGACCATCAAGCCCGGCGCCTACCCCTGGGGCAACCATCCCAACGCCTGGCGGCCG
CAGCATATTCACTTCTCGCTGTTCGGCGACTACTTTGCCAGCCGCCTGGTGACGCAGATGTATTTCCCCGGCGACCCGCT
GTTTGCCTACGACCCGATGTACCAGGGCGTGCCGCCCGACTCGCGCGAATTGATGGTGGCCAAGTTCAGCCTCGACGTCA
CCCAGCCCGACTTTGCGCTGGGCTATGTGTTTGACATCGTGCTGCGCGGCCCCAAGGCTACGCGTTTCGAATAA

Upstream 100 bases:

>100_bases
CTTAACTATAACCATTGGTTATGCAAAAGTGCAATAAATATCAATATACATAACTATTGATATTGACTAAAGTCACCCAA
TCACTTGAACAGGAGACCCC

Downstream 100 bases:

>100_bases
GCAGGAACAGCAGCAATAGCAGGAACGCAACCATGACCCAACTCAAGCAAACCCCCTCGCAAACCGTCGGCCCCTACTTT
GCCTACGGCCTCACCCCCAC

Product: protocatechuate 3,4-dioxygenase subunit beta

Products: NA

Alternate protein names: 3,4-PCD [H]

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MSTELDSSYLAPRDWTGHPSHIYPYYKSTMLRGPKQPLVPIKQALAQLNAPVYGSDQLGPLDHDLTKNAVKNGEPLGERI
IVTGRVSDEDGRPVRNTLVEVWQANAAGRYVHKVDQHHAPLDPNFLGAGRCMTDSDGRYTFMTIKPGAYPWGNHPNAWRP
QHIHFSLFGDYFASRLVTQMYFPGDPLFAYDPMYQGVPPDSRELMVAKFSLDVTQPDFALGYVFDIVLRGPKATRFE

Sequences:

>Translated_237_residues
MSTELDSSYLAPRDWTGHPSHIYPYYKSTMLRGPKQPLVPIKQALAQLNAPVYGSDQLGPLDHDLTKNAVKNGEPLGERI
IVTGRVSDEDGRPVRNTLVEVWQANAAGRYVHKVDQHHAPLDPNFLGAGRCMTDSDGRYTFMTIKPGAYPWGNHPNAWRP
QHIHFSLFGDYFASRLVTQMYFPGDPLFAYDPMYQGVPPDSRELMVAKFSLDVTQPDFALGYVFDIVLRGPKATRFE
>Mature_236_residues
STELDSSYLAPRDWTGHPSHIYPYYKSTMLRGPKQPLVPIKQALAQLNAPVYGSDQLGPLDHDLTKNAVKNGEPLGERII
VTGRVSDEDGRPVRNTLVEVWQANAAGRYVHKVDQHHAPLDPNFLGAGRCMTDSDGRYTFMTIKPGAYPWGNHPNAWRPQ
HIHFSLFGDYFASRLVTQMYFPGDPLFAYDPMYQGVPPDSRELMVAKFSLDVTQPDFALGYVFDIVLRGPKATRFE

Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000627
- InterPro:   IPR015889
- InterPro:   IPR012785 [H]

Pfam domain/function: PF00775 Dioxygenase_C [H]

EC number: =1.13.11.3 [H]

Molecular weight: Translated: 26694; Mature: 26563

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00083 INTRADIOL_DIOXYGENAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTELDSSYLAPRDWTGHPSHIYPYYKSTMLRGPKQPLVPIKQALAQLNAPVYGSDQLGP
CCCCCCCCCCCCCCCCCCCCEECHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
LDHDLTKNAVKNGEPLGERIIVTGRVSDEDGRPVRNTLVEVWQANAAGRYVHKVDQHHAP
CCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCC
LDPNFLGAGRCMTDSDGRYTFMTIKPGAYPWGNHPNAWRPQHIHFSLFGDYFASRLVTQM
CCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHH
YFPGDPLFAYDPMYQGVPPDSRELMVAKFSLDVTQPDFALGYVFDIVLRGPKATRFE
CCCCCCCEEECCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
STELDSSYLAPRDWTGHPSHIYPYYKSTMLRGPKQPLVPIKQALAQLNAPVYGSDQLGP
CCCCCCCCCCCCCCCCCCCEECHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
LDHDLTKNAVKNGEPLGERIIVTGRVSDEDGRPVRNTLVEVWQANAAGRYVHKVDQHHAP
CCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCC
LDPNFLGAGRCMTDSDGRYTFMTIKPGAYPWGNHPNAWRPQHIHFSLFGDYFASRLVTQM
CCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHH
YFPGDPLFAYDPMYQGVPPDSRELMVAKFSLDVTQPDFALGYVFDIVLRGPKATRFE
CCCCCCCEEECCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2808303 [H]