| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is pcaG [H]
Identifier: 91786533
GI number: 91786533
Start: 635348
End: 635938
Strand: Direct
Name: pcaG [H]
Synonym: Bpro_0628
Alternate gene names: 91786533
Gene position: 635348-635938 (Clockwise)
Preceding gene: 91786532
Following gene: 91786534
Centisome position: 12.22
GC content: 63.45
Gene sequence:
>591_bases ATGACCCAACTCAAGCAAACCCCCTCGCAAACCGTCGGCCCCTACTTTGCCTACGGCCTCACCCCCACACAGTACGGCTA CGACCTCAAAAGCCTGTTCACCCCCGTGCTGGCCCAGCCGCATGCGCAGGGCGAACACATCCGCATCACAGGCCAGGTGT TCGACGGCGCAGGCCAGAGCGTCCTTGACGCCCTGGTCGAGATCAGCCAGCCTGATGCCAGCGGCCAGCCCGTGACCTCG GTGGCTGATGCCCAAGCCAAAGGCTTCACCGGCTTTGGCCGCTGCGGCACCGGCACCCTGGCGGACCACCACTTTGCCTT TGACACCGTGAAGCCGGGTGTTGCCGCCCCGGGGCAGGCGCCTTTCATCAACGTCTGCGTCACCATGCGCGGCCTGCTGG TGCACACCTTCAGCCGCATTTATTTTGACGATGAAGCCGCCGCCAACAGCAAAGACGCCGTGTTGAATAGCGTGCCCGCC GAGCGCCGCAACACGCTGATTGCCAGGCGCACCATGACCGGCGCCGGGCCGGTTTATCGCTTTGACATCCACATGCAGGG TGACAAGGAAACGGTGTTCTTCGACCTTTGA
Upstream 100 bases:
>100_bases CCGACTTTGCGCTGGGCTATGTGTTTGACATCGTGCTGCGCGGCCCCAAGGCTACGCGTTTCGAATAAGCAGGAACAGCA GCAATAGCAGGAACGCAACC
Downstream 100 bases:
>100_bases CGGAGCGTTTTGAAAGGGCGGTGCCGGGACGCGGCTGGCGGCGGGAGCCACCGGGAACACTGGCGAGCGCAGCGCCGCCC CTGCTGCCTCTGCCCTGCAT
Product: protocatechuate 3,4-dioxygenase subunit alpha
Products: NA
Alternate protein names: 3,4-PCD [H]
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MTQLKQTPSQTVGPYFAYGLTPTQYGYDLKSLFTPVLAQPHAQGEHIRITGQVFDGAGQSVLDALVEISQPDASGQPVTS VADAQAKGFTGFGRCGTGTLADHHFAFDTVKPGVAAPGQAPFINVCVTMRGLLVHTFSRIYFDDEAAANSKDAVLNSVPA ERRNTLIARRTMTGAGPVYRFDIHMQGDKETVFFDL
Sequences:
>Translated_196_residues MTQLKQTPSQTVGPYFAYGLTPTQYGYDLKSLFTPVLAQPHAQGEHIRITGQVFDGAGQSVLDALVEISQPDASGQPVTS VADAQAKGFTGFGRCGTGTLADHHFAFDTVKPGVAAPGQAPFINVCVTMRGLLVHTFSRIYFDDEAAANSKDAVLNSVPA ERRNTLIARRTMTGAGPVYRFDIHMQGDKETVFFDL >Mature_195_residues TQLKQTPSQTVGPYFAYGLTPTQYGYDLKSLFTPVLAQPHAQGEHIRITGQVFDGAGQSVLDALVEISQPDASGQPVTSV ADAQAKGFTGFGRCGTGTLADHHFAFDTVKPGVAAPGQAPFINVCVTMRGLLVHTFSRIYFDDEAAANSKDAVLNSVPAE RRNTLIARRTMTGAGPVYRFDIHMQGDKETVFFDL
Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]
COG id: COG3485
COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000627 - InterPro: IPR015889 - InterPro: IPR012786 [H]
Pfam domain/function: PF00775 Dioxygenase_C [H]
EC number: =1.13.11.3 [H]
Molecular weight: Translated: 21098; Mature: 20967
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLKQTPSQTVGPYFAYGLTPTQYGYDLKSLFTPVLAQPHAQGEHIRITGQVFDGAGQS CCCCCCCCCCCCCCEEEECCCCHHCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHH VLDALVEISQPDASGQPVTSVADAQAKGFTGFGRCGTGTLADHHFAFDTVKPGVAAPGQA HHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC PFINVCVTMRGLLVHTFSRIYFDDEAAANSKDAVLNSVPAERRNTLIARRTMTGAGPVYR CHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHCCCCHHHHEEEEEEECCCCCCEEE FDIHMQGDKETVFFDL EEEEECCCCCEEEEEC >Mature Secondary Structure TQLKQTPSQTVGPYFAYGLTPTQYGYDLKSLFTPVLAQPHAQGEHIRITGQVFDGAGQS CCCCCCCCCCCCCEEEECCCCHHCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHH VLDALVEISQPDASGQPVTSVADAQAKGFTGFGRCGTGTLADHHFAFDTVKPGVAAPGQA HHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC PFINVCVTMRGLLVHTFSRIYFDDEAAANSKDAVLNSVPAERRNTLIARRTMTGAGPVYR CHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHCCCCHHHHEEEEEEECCCCCCEEE FDIHMQGDKETVFFDL EEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2808303 [H]