| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is paaK [H]
Identifier: 91786504
GI number: 91786504
Start: 602955
End: 604223
Strand: Reverse
Name: paaK [H]
Synonym: Bpro_0598
Alternate gene names: 91786504
Gene position: 604223-602955 (Counterclockwise)
Preceding gene: 91786505
Following gene: 91786503
Centisome position: 11.62
GC content: 65.88
Gene sequence:
>1269_bases GTGACAACACATTACGACGCACTGGAAGTGCAACCCCCTTCGCAACGCGAAGCCGCCCTGATGGCCGCGCTGCCGCAGCA GATCGCGCATGCGCAGTCCCATGCGCCGGCCTTTGCCGGCATTTTGCGGGGGGTCGATGCCAGCACCGTCACCTCCCGCG CCGCGCTGGCGCACCTGCCGGTGACCCGCAAGCACGAGTTGCTGGCGCTGCAGCAGGCCGAACGCCTGACAACCGGCAGC GGGGACCCCTTTGGCGGCTTCAGTGCGCTGCGCTATGGCCCCCACATGCCGCACGTGTTTGCCAGCCCCGGCACGATTTA CGAACCCGAAGGTACGCGCAAAGACTACTGGCGCCTGGCACGCGCCCTGTTTGCCGCCGGGTTTCGCCCCGGCGAGCTGA TTCATAACTGCTTCAGCTACCACTTTGTACCGGCCGGCTCCATGATGGAAAGCGGCGCCCATGCGCTGGGCTGCACGGTG TTTCCGGGCGGCACCGGGCAAACCGAGCAGCAGGTGCAGGCCATGGCCGAATTAAAACCGGCAGGGTATATCGGCACGCC GAGTTTTCTGAAAATCATTGTCGACAAGGCCGCCGAGATGGGCGTGGCCCTGCCCACCGTCACCAAGGCCCTGGTTTCGG CAGAGGCCTTTCCGCCCAGCCTGCGCGACTGGCTGGCCGGGCACGGCATTGCCGGCTACCAGTGTTATGCCTCGGCCGAC CTGGGCCTGATTGCCTACGAGACCGAAGCGCGCGAAGGCCTGGTGCTCGATGAAGGCGTGATTGTGGAAATCGTCCGTCC CGGCACGGGCACCCCGGTGGCCGAGGGTGAAGTGGGCGAACTCGTGGTCACCACGCTGAACCCCGACTACCCGCTGATCC GCTTCGGCACCGGCGATCTGTCGGCCGTGTTGCCGGGCCGCTGCCCGACCGGGCGCACCAACACCCGCATCAAGGGCTGG ATGGGTCGGGCGGACCAGACCGTCAAGGTACGCGGCATGTTTGTGCATCCGGGCCAGATAGCCGACATTACCCGGCGTTT TCCCGAGGTGAGCAAGGCCCGGCTGGTGGTCAACGGCGAGATGGCCAATGACAGCATGACCCTTCAGGTCGAAATCGCAG GGGGCGCCGCAGCGCAGGCGGGGCTGGACCAGCGCATCAGCGAGGCCATACGCGATGTCACCAAGCTGCGCGGCACGGTG CAGCTGATGGACCCTGGAAGCCTTCCCAACGACGGCAAGGTGATTGAGGACGCCCGCAGCTATCAATAA
Upstream 100 bases:
>100_bases CTGTCGCTTCGCGTACTGCGCTGCCCCCCAGGGGAGCTAATTTTCCTTGGGACGGCCGGGCGAAAAACTCCGCCCGGCCG CAGGATTTGGGAGATTTCGA
Downstream 100 bases:
>100_bases GGAGAATAAAAAAAGCGGGCTGAAAGAAGGGGGTCGGCCCGGAGACGGGAGGCCACGCTTTCACTCTTTTCGTGCGGTAC ATCGCCCCCGTGTAGAGGAT
Product: putative phenylacetate-CoA ligase
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MTTHYDALEVQPPSQREAALMAALPQQIAHAQSHAPAFAGILRGVDASTVTSRAALAHLPVTRKHELLALQQAERLTTGS GDPFGGFSALRYGPHMPHVFASPGTIYEPEGTRKDYWRLARALFAAGFRPGELIHNCFSYHFVPAGSMMESGAHALGCTV FPGGTGQTEQQVQAMAELKPAGYIGTPSFLKIIVDKAAEMGVALPTVTKALVSAEAFPPSLRDWLAGHGIAGYQCYASAD LGLIAYETEAREGLVLDEGVIVEIVRPGTGTPVAEGEVGELVVTTLNPDYPLIRFGTGDLSAVLPGRCPTGRTNTRIKGW MGRADQTVKVRGMFVHPGQIADITRRFPEVSKARLVVNGEMANDSMTLQVEIAGGAAAQAGLDQRISEAIRDVTKLRGTV QLMDPGSLPNDGKVIEDARSYQ
Sequences:
>Translated_422_residues MTTHYDALEVQPPSQREAALMAALPQQIAHAQSHAPAFAGILRGVDASTVTSRAALAHLPVTRKHELLALQQAERLTTGS GDPFGGFSALRYGPHMPHVFASPGTIYEPEGTRKDYWRLARALFAAGFRPGELIHNCFSYHFVPAGSMMESGAHALGCTV FPGGTGQTEQQVQAMAELKPAGYIGTPSFLKIIVDKAAEMGVALPTVTKALVSAEAFPPSLRDWLAGHGIAGYQCYASAD LGLIAYETEAREGLVLDEGVIVEIVRPGTGTPVAEGEVGELVVTTLNPDYPLIRFGTGDLSAVLPGRCPTGRTNTRIKGW MGRADQTVKVRGMFVHPGQIADITRRFPEVSKARLVVNGEMANDSMTLQVEIAGGAAAQAGLDQRISEAIRDVTKLRGTV QLMDPGSLPNDGKVIEDARSYQ >Mature_421_residues TTHYDALEVQPPSQREAALMAALPQQIAHAQSHAPAFAGILRGVDASTVTSRAALAHLPVTRKHELLALQQAERLTTGSG DPFGGFSALRYGPHMPHVFASPGTIYEPEGTRKDYWRLARALFAAGFRPGELIHNCFSYHFVPAGSMMESGAHALGCTVF PGGTGQTEQQVQAMAELKPAGYIGTPSFLKIIVDKAAEMGVALPTVTKALVSAEAFPPSLRDWLAGHGIAGYQCYASADL GLIAYETEAREGLVLDEGVIVEIVRPGTGTPVAEGEVGELVVTTLNPDYPLIRFGTGDLSAVLPGRCPTGRTNTRIKGWM GRADQTVKVRGMFVHPGQIADITRRFPEVSKARLVVNGEMANDSMTLQVEIAGGAAAQAGLDQRISEAIRDVTKLRGTVQ LMDPGSLPNDGKVIEDARSYQ
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=437, Percent_Identity=27.0022883295195, Blast_Score=120, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 44979; Mature: 44848
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHYDALEVQPPSQREAALMAALPQQIAHAQSHAPAFAGILRGVDASTVTSRAALAHLP CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCC VTRKHELLALQQAERLTTGSGDPFGGFSALRYGPHMPHVFASPGTIYEPEGTRKDYWRLA CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEECCCCCEECCCCCHHHHHHHH RALFAAGFRPGELIHNCFSYHFVPAGSMMESGAHALGCTVFPGGTGQTEQQVQAMAELKP HHHHHCCCCHHHHHHHHHHHEECCCCHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCC AGYIGTPSFLKIIVDKAAEMGVALPTVTKALVSAEAFPPSLRDWLAGHGIAGYQCYASAD CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCC LGLIAYETEAREGLVLDEGVIVEIVRPGTGTPVAEGEVGELVVTTLNPDYPLIRFGTGDL CCEEEEECCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCC SAVLPGRCPTGRTNTRIKGWMGRADQTVKVRGMFVHPGQIADITRRFPEVSKARLVVNGE CEECCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCEEEEEECE MANDSMTLQVEIAGGAAAQAGLDQRISEAIRDVTKLRGTVQLMDPGSLPNDGKVIEDARS ECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHC YQ CC >Mature Secondary Structure TTHYDALEVQPPSQREAALMAALPQQIAHAQSHAPAFAGILRGVDASTVTSRAALAHLP CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCC VTRKHELLALQQAERLTTGSGDPFGGFSALRYGPHMPHVFASPGTIYEPEGTRKDYWRLA CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEECCCCCEECCCCCHHHHHHHH RALFAAGFRPGELIHNCFSYHFVPAGSMMESGAHALGCTVFPGGTGQTEQQVQAMAELKP HHHHHCCCCHHHHHHHHHHHEECCCCHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCC AGYIGTPSFLKIIVDKAAEMGVALPTVTKALVSAEAFPPSLRDWLAGHGIAGYQCYASAD CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCC LGLIAYETEAREGLVLDEGVIVEIVRPGTGTPVAEGEVGELVVTTLNPDYPLIRFGTGDL CCEEEEECCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCC SAVLPGRCPTGRTNTRIKGWMGRADQTVKVRGMFVHPGQIADITRRFPEVSKARLVVNGE CEECCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCEEEEEECE MANDSMTLQVEIAGGAAAQAGLDQRISEAIRDVTKLRGTVQLMDPGSLPNDGKVIEDARS ECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHC YQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]