| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91786503
Identifier: 91786503
GI number: 91786503
Start: 601792
End: 602778
Strand: Reverse
Name: 91786503
Synonym: Bpro_0597
Alternate gene names: NA
Gene position: 602778-601792 (Counterclockwise)
Preceding gene: 91786504
Following gene: 91786502
Centisome position: 11.59
GC content: 62.31
Gene sequence:
>987_bases ATGAAACGCTTGTTAGTCTTGGCCGTCGCCGCGACAGCCCTCTTCGCCAACGCCCAAACCTTCCCGGGCTCCAAGCCCAT CAGCTTTGTGGTTCCTTTTGCCGCCGGCGGCCCCACCGACCGGGTGGCGCGCGACCTGGCCGAAGCCATGCGCAAATCCA TGGGCGGTGGCGCCAATTTTGTGGTGGAAAACGTCAACGGCGCCGGAGGCACCATTGGCGCGGCCAAGGTCGCCAAGGCG GCCCCTGATGGCCATACGCTGCTGCTTCACCACATTGGCATGGCGTCCGCACCCGCCCTGTACCGCAAACTGTCTTACAA GCCGCTGGATGATTTCGAATACGTCGGCATGATCAACGAAGTGCCGATGACCCTGATCGGCAAGCCCCAGTTGCCGGCCA ACAACTACCGTGACTTTGAAAACTACATCAAGGCCAATGCCGGCAAACTGAACATCGCCCACGCCGGCCTGGGTTCCGCC TCGCACCTGTGCGGCTTGATGTGGCAATCGGCCATCAAGGCCAACGACGCCATGACCACCATCCCGTTCGGCGGCACCGC GCCGGCCATGAACGCACTGGTGGGCGGTCAGGTCGACCTGATGTGCGACCAGACCACCAACACCACCGGCCAGATCGAGG CCGGCCGTGTCAAGGCGTTTGCCGTGACCACGGCCAAGCCCCTGTCCGGCAACAAACTGCTCAAGGACTATCCGACGCTG CAGGACATGGGCTTGAAGGGATTTGATCTGACCATCTGGCATGGCCTGTATGCGCCCAAGGGCACACCCCCTGCCGTGCT GGCCCAGCTCAATACCGCTCTGAAGCTGGCACTGAAAGACCCTGACTTCATCAAGAAGCAGGAAGGCCTGGGCGCGATCG TTGTCGCCGACAAGCGCGTCGAGCCGGCCGCCCACAAGGCTTTCGTGGCAGACCAGATCGCCAAGCTCAAACCCGTGATC GAGGCTGCCGGAAAGTTTGCCGACTGA
Upstream 100 bases:
>100_bases GTACATCGCCCCCGTGTAGAGGATATTGCTTACGTAGTTCCCACTGTAAATGTGCCCTGCGCCACTCTTACACTCGAGGC TCATTTTCAAGGAGACACGT
Downstream 100 bases:
>100_bases GCAGGCCGGCCCTCGCCGTATTTGCCAAGCCGCCGGGGGTCAAGCCCGGCGGCTTTTTTCATGCCCGGATTTACCCTCTT GAAGCACCGGTGCGGGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MKRLLVLAVAATALFANAQTFPGSKPISFVVPFAAGGPTDRVARDLAEAMRKSMGGGANFVVENVNGAGGTIGAAKVAKA APDGHTLLLHHIGMASAPALYRKLSYKPLDDFEYVGMINEVPMTLIGKPQLPANNYRDFENYIKANAGKLNIAHAGLGSA SHLCGLMWQSAIKANDAMTTIPFGGTAPAMNALVGGQVDLMCDQTTNTTGQIEAGRVKAFAVTTAKPLSGNKLLKDYPTL QDMGLKGFDLTIWHGLYAPKGTPPAVLAQLNTALKLALKDPDFIKKQEGLGAIVVADKRVEPAAHKAFVADQIAKLKPVI EAAGKFAD
Sequences:
>Translated_328_residues MKRLLVLAVAATALFANAQTFPGSKPISFVVPFAAGGPTDRVARDLAEAMRKSMGGGANFVVENVNGAGGTIGAAKVAKA APDGHTLLLHHIGMASAPALYRKLSYKPLDDFEYVGMINEVPMTLIGKPQLPANNYRDFENYIKANAGKLNIAHAGLGSA SHLCGLMWQSAIKANDAMTTIPFGGTAPAMNALVGGQVDLMCDQTTNTTGQIEAGRVKAFAVTTAKPLSGNKLLKDYPTL QDMGLKGFDLTIWHGLYAPKGTPPAVLAQLNTALKLALKDPDFIKKQEGLGAIVVADKRVEPAAHKAFVADQIAKLKPVI EAAGKFAD >Mature_328_residues MKRLLVLAVAATALFANAQTFPGSKPISFVVPFAAGGPTDRVARDLAEAMRKSMGGGANFVVENVNGAGGTIGAAKVAKA APDGHTLLLHHIGMASAPALYRKLSYKPLDDFEYVGMINEVPMTLIGKPQLPANNYRDFENYIKANAGKLNIAHAGLGSA SHLCGLMWQSAIKANDAMTTIPFGGTAPAMNALVGGQVDLMCDQTTNTTGQIEAGRVKAFAVTTAKPLSGNKLLKDYPTL QDMGLKGFDLTIWHGLYAPKGTPPAVLAQLNTALKLALKDPDFIKKQEGLGAIVVADKRVEPAAHKAFVADQIAKLKPVI EAAGKFAD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34431; Mature: 34431
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLVLAVAATALFANAQTFPGSKPISFVVPFAAGGPTDRVARDLAEAMRKSMGGGANF CCHHEEHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEE VVENVNGAGGTIGAAKVAKAAPDGHTLLLHHIGMASAPALYRKLSYKPLDDFEYVGMINE EEECCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCHHHHCHHHC VPMTLIGKPQLPANNYRDFENYIKANAGKLNIAHAGLGSASHLCGLMWQSAIKANDAMTT CCCEEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEE IPFGGTAPAMNALVGGQVDLMCDQTTNTTGQIEAGRVKAFAVTTAKPLSGNKLLKDYPTL ECCCCCCHHHHHHHCCCEEEEECCCCCCCCCEECCEEEEEEEEECCCCCCCCHHHHCCCH QDMGLKGFDLTIWHGLYAPKGTPPAVLAQLNTALKLALKDPDFIKKQEGLGAIVVADKRV HHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHEEEEECCCHHHHHHCCCEEEEEECCCC EPAAHKAFVADQIAKLKPVIEAAGKFAD CHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKRLLVLAVAATALFANAQTFPGSKPISFVVPFAAGGPTDRVARDLAEAMRKSMGGGANF CCHHEEHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEE VVENVNGAGGTIGAAKVAKAAPDGHTLLLHHIGMASAPALYRKLSYKPLDDFEYVGMINE EEECCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCHHHHCHHHC VPMTLIGKPQLPANNYRDFENYIKANAGKLNIAHAGLGSASHLCGLMWQSAIKANDAMTT CCCEEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEE IPFGGTAPAMNALVGGQVDLMCDQTTNTTGQIEAGRVKAFAVTTAKPLSGNKLLKDYPTL ECCCCCCHHHHHHHCCCEEEEECCCCCCCCCEECCEEEEEEEEECCCCCCCCHHHHCCCH QDMGLKGFDLTIWHGLYAPKGTPPAVLAQLNTALKLALKDPDFIKKQEGLGAIVVADKRV HHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHEEEEECCCHHHHHHCCCEEEEEECCCC EPAAHKAFVADQIAKLKPVIEAAGKFAD CHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]