Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is paaK [H]

Identifier: 91786504

GI number: 91786504

Start: 602955

End: 604223

Strand: Reverse

Name: paaK [H]

Synonym: Bpro_0598

Alternate gene names: 91786504

Gene position: 604223-602955 (Counterclockwise)

Preceding gene: 91786505

Following gene: 91786503

Centisome position: 11.62

GC content: 65.88

Gene sequence:

>1269_bases
GTGACAACACATTACGACGCACTGGAAGTGCAACCCCCTTCGCAACGCGAAGCCGCCCTGATGGCCGCGCTGCCGCAGCA
GATCGCGCATGCGCAGTCCCATGCGCCGGCCTTTGCCGGCATTTTGCGGGGGGTCGATGCCAGCACCGTCACCTCCCGCG
CCGCGCTGGCGCACCTGCCGGTGACCCGCAAGCACGAGTTGCTGGCGCTGCAGCAGGCCGAACGCCTGACAACCGGCAGC
GGGGACCCCTTTGGCGGCTTCAGTGCGCTGCGCTATGGCCCCCACATGCCGCACGTGTTTGCCAGCCCCGGCACGATTTA
CGAACCCGAAGGTACGCGCAAAGACTACTGGCGCCTGGCACGCGCCCTGTTTGCCGCCGGGTTTCGCCCCGGCGAGCTGA
TTCATAACTGCTTCAGCTACCACTTTGTACCGGCCGGCTCCATGATGGAAAGCGGCGCCCATGCGCTGGGCTGCACGGTG
TTTCCGGGCGGCACCGGGCAAACCGAGCAGCAGGTGCAGGCCATGGCCGAATTAAAACCGGCAGGGTATATCGGCACGCC
GAGTTTTCTGAAAATCATTGTCGACAAGGCCGCCGAGATGGGCGTGGCCCTGCCCACCGTCACCAAGGCCCTGGTTTCGG
CAGAGGCCTTTCCGCCCAGCCTGCGCGACTGGCTGGCCGGGCACGGCATTGCCGGCTACCAGTGTTATGCCTCGGCCGAC
CTGGGCCTGATTGCCTACGAGACCGAAGCGCGCGAAGGCCTGGTGCTCGATGAAGGCGTGATTGTGGAAATCGTCCGTCC
CGGCACGGGCACCCCGGTGGCCGAGGGTGAAGTGGGCGAACTCGTGGTCACCACGCTGAACCCCGACTACCCGCTGATCC
GCTTCGGCACCGGCGATCTGTCGGCCGTGTTGCCGGGCCGCTGCCCGACCGGGCGCACCAACACCCGCATCAAGGGCTGG
ATGGGTCGGGCGGACCAGACCGTCAAGGTACGCGGCATGTTTGTGCATCCGGGCCAGATAGCCGACATTACCCGGCGTTT
TCCCGAGGTGAGCAAGGCCCGGCTGGTGGTCAACGGCGAGATGGCCAATGACAGCATGACCCTTCAGGTCGAAATCGCAG
GGGGCGCCGCAGCGCAGGCGGGGCTGGACCAGCGCATCAGCGAGGCCATACGCGATGTCACCAAGCTGCGCGGCACGGTG
CAGCTGATGGACCCTGGAAGCCTTCCCAACGACGGCAAGGTGATTGAGGACGCCCGCAGCTATCAATAA

Upstream 100 bases:

>100_bases
CTGTCGCTTCGCGTACTGCGCTGCCCCCCAGGGGAGCTAATTTTCCTTGGGACGGCCGGGCGAAAAACTCCGCCCGGCCG
CAGGATTTGGGAGATTTCGA

Downstream 100 bases:

>100_bases
GGAGAATAAAAAAAGCGGGCTGAAAGAAGGGGGTCGGCCCGGAGACGGGAGGCCACGCTTTCACTCTTTTCGTGCGGTAC
ATCGCCCCCGTGTAGAGGAT

Product: putative phenylacetate-CoA ligase

Products: NA

Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MTTHYDALEVQPPSQREAALMAALPQQIAHAQSHAPAFAGILRGVDASTVTSRAALAHLPVTRKHELLALQQAERLTTGS
GDPFGGFSALRYGPHMPHVFASPGTIYEPEGTRKDYWRLARALFAAGFRPGELIHNCFSYHFVPAGSMMESGAHALGCTV
FPGGTGQTEQQVQAMAELKPAGYIGTPSFLKIIVDKAAEMGVALPTVTKALVSAEAFPPSLRDWLAGHGIAGYQCYASAD
LGLIAYETEAREGLVLDEGVIVEIVRPGTGTPVAEGEVGELVVTTLNPDYPLIRFGTGDLSAVLPGRCPTGRTNTRIKGW
MGRADQTVKVRGMFVHPGQIADITRRFPEVSKARLVVNGEMANDSMTLQVEIAGGAAAQAGLDQRISEAIRDVTKLRGTV
QLMDPGSLPNDGKVIEDARSYQ

Sequences:

>Translated_422_residues
MTTHYDALEVQPPSQREAALMAALPQQIAHAQSHAPAFAGILRGVDASTVTSRAALAHLPVTRKHELLALQQAERLTTGS
GDPFGGFSALRYGPHMPHVFASPGTIYEPEGTRKDYWRLARALFAAGFRPGELIHNCFSYHFVPAGSMMESGAHALGCTV
FPGGTGQTEQQVQAMAELKPAGYIGTPSFLKIIVDKAAEMGVALPTVTKALVSAEAFPPSLRDWLAGHGIAGYQCYASAD
LGLIAYETEAREGLVLDEGVIVEIVRPGTGTPVAEGEVGELVVTTLNPDYPLIRFGTGDLSAVLPGRCPTGRTNTRIKGW
MGRADQTVKVRGMFVHPGQIADITRRFPEVSKARLVVNGEMANDSMTLQVEIAGGAAAQAGLDQRISEAIRDVTKLRGTV
QLMDPGSLPNDGKVIEDARSYQ
>Mature_421_residues
TTHYDALEVQPPSQREAALMAALPQQIAHAQSHAPAFAGILRGVDASTVTSRAALAHLPVTRKHELLALQQAERLTTGSG
DPFGGFSALRYGPHMPHVFASPGTIYEPEGTRKDYWRLARALFAAGFRPGELIHNCFSYHFVPAGSMMESGAHALGCTVF
PGGTGQTEQQVQAMAELKPAGYIGTPSFLKIIVDKAAEMGVALPTVTKALVSAEAFPPSLRDWLAGHGIAGYQCYASADL
GLIAYETEAREGLVLDEGVIVEIVRPGTGTPVAEGEVGELVVTTLNPDYPLIRFGTGDLSAVLPGRCPTGRTNTRIKGWM
GRADQTVKVRGMFVHPGQIADITRRFPEVSKARLVVNGEMANDSMTLQVEIAGGAAAQAGLDQRISEAIRDVTKLRGTVQ
LMDPGSLPNDGKVIEDARSYQ

Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]

COG id: COG1541

COG function: function code H; Coenzyme F390 synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787664, Length=437, Percent_Identity=27.0022883295195, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000873
- InterPro:   IPR011880 [H]

Pfam domain/function: PF00501 AMP-binding [H]

EC number: =6.2.1.30 [H]

Molecular weight: Translated: 44979; Mature: 44848

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTHYDALEVQPPSQREAALMAALPQQIAHAQSHAPAFAGILRGVDASTVTSRAALAHLP
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCC
VTRKHELLALQQAERLTTGSGDPFGGFSALRYGPHMPHVFASPGTIYEPEGTRKDYWRLA
CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEECCCCCEECCCCCHHHHHHHH
RALFAAGFRPGELIHNCFSYHFVPAGSMMESGAHALGCTVFPGGTGQTEQQVQAMAELKP
HHHHHCCCCHHHHHHHHHHHEECCCCHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCC
AGYIGTPSFLKIIVDKAAEMGVALPTVTKALVSAEAFPPSLRDWLAGHGIAGYQCYASAD
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCC
LGLIAYETEAREGLVLDEGVIVEIVRPGTGTPVAEGEVGELVVTTLNPDYPLIRFGTGDL
CCEEEEECCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCC
SAVLPGRCPTGRTNTRIKGWMGRADQTVKVRGMFVHPGQIADITRRFPEVSKARLVVNGE
CEECCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCEEEEEECE
MANDSMTLQVEIAGGAAAQAGLDQRISEAIRDVTKLRGTVQLMDPGSLPNDGKVIEDARS
ECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHC
YQ
CC
>Mature Secondary Structure 
TTHYDALEVQPPSQREAALMAALPQQIAHAQSHAPAFAGILRGVDASTVTSRAALAHLP
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCC
VTRKHELLALQQAERLTTGSGDPFGGFSALRYGPHMPHVFASPGTIYEPEGTRKDYWRLA
CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEECCCCCEECCCCCHHHHHHHH
RALFAAGFRPGELIHNCFSYHFVPAGSMMESGAHALGCTVFPGGTGQTEQQVQAMAELKP
HHHHHCCCCHHHHHHHHHHHEECCCCHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCC
AGYIGTPSFLKIIVDKAAEMGVALPTVTKALVSAEAFPPSLRDWLAGHGIAGYQCYASAD
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCC
LGLIAYETEAREGLVLDEGVIVEIVRPGTGTPVAEGEVGELVVTTLNPDYPLIRFGTGDL
CCEEEEECCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCC
SAVLPGRCPTGRTNTRIKGWMGRADQTVKVRGMFVHPGQIADITRRFPEVSKARLVVNGE
CEECCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCEEEEEECE
MANDSMTLQVEIAGGAAAQAGLDQRISEAIRDVTKLRGTVQLMDPGSLPNDGKVIEDARS
ECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHC
YQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9748275; 9278503; 10766858 [H]