| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786500
Identifier: 91786500
GI number: 91786500
Start: 599253
End: 600002
Strand: Reverse
Name: 91786500
Synonym: Bpro_0594
Alternate gene names: NA
Gene position: 600002-599253 (Counterclockwise)
Preceding gene: 91786502
Following gene: 91786499
Centisome position: 11.54
GC content: 68.8
Gene sequence:
>750_bases ATGTTCAATATCGCCACCGTTCAAAAACCCGCTGATCAGGCCCTTCGCCAGGATGGCCTGAGCCTGCTCTACCCGGCCGG CCTCACCACCAGCCTGCACCTCGACAGCCCCGCATGGAGGCAGGGCTGGCAACAGCTGACCGACTCCTGGAACCGCCTGC CGCCCGACGCCCACCTCAAGGACGGCGGGCATTACCGCAAGCGCCGGCATGCCTGCTTTGTCCAGGAACTGCCGGGTGGC GCGCTCACGCAGGCGCCGCACCGCGCCCACTGGCAGCCCACCGACTACAACGCCCTGCATGGTGGCTTTGAGCGCTGGTT CGAGCCGGTGGAGCCGGCCGTGGCCGAGGCGCCCGCCTGGACAGATTTGCTGGCCAGCCTGGGAAAGCTGTTTGCCCAGG TCCGTCCCGTGCCGCGCTGGTATATCGAGGCGCACCAGTTCCGCATCGACACCGCCGGCGGCGTCGGACGCCCGACGCCG GAAGGCGCGCACCGCGATGGCGTCGACTTTGTGGTGGTGCTGCTGGTGGCACGCCATGGCGTCAAGGGCGGCGAGACCCG GGTGTTTGACGCGAACGGCCCGGACGGCGTGCGCTTTGTGATGCAGGAGCCGCTGACTACGCTGCTGCTGGACGATGCCC GCGTGATTCACGAAACCACGCCCATCCTGCCGGGCGACGGCCCTGCAGAAGACGGCTACCGGGACACGCTGGTGCTGACC TACCGCGCCGGGGGCTTTCAGGCGCCCTGA
Upstream 100 bases:
>100_bases CATCTCTTTTCGGCCTTCCCGCGCCTGCTCCGGTACCACTTCCCGCCCCACCTGGCGCCTGAACGGCAACCGAAGCGCGC GGTAAAGCAAAATAGCCAGC
Downstream 100 bases:
>100_bases CCCGGCCTGGCGCCTTGACGCCTGGTGCCCGGCGCCCCTGCTCCTCTTTTTCAGAATCAACTTTTCCGTCTTTCTGACTG GCCGGAAAGCCGCCATGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MFNIATVQKPADQALRQDGLSLLYPAGLTTSLHLDSPAWRQGWQQLTDSWNRLPPDAHLKDGGHYRKRRHACFVQELPGG ALTQAPHRAHWQPTDYNALHGGFERWFEPVEPAVAEAPAWTDLLASLGKLFAQVRPVPRWYIEAHQFRIDTAGGVGRPTP EGAHRDGVDFVVVLLVARHGVKGGETRVFDANGPDGVRFVMQEPLTTLLLDDARVIHETTPILPGDGPAEDGYRDTLVLT YRAGGFQAP
Sequences:
>Translated_249_residues MFNIATVQKPADQALRQDGLSLLYPAGLTTSLHLDSPAWRQGWQQLTDSWNRLPPDAHLKDGGHYRKRRHACFVQELPGG ALTQAPHRAHWQPTDYNALHGGFERWFEPVEPAVAEAPAWTDLLASLGKLFAQVRPVPRWYIEAHQFRIDTAGGVGRPTP EGAHRDGVDFVVVLLVARHGVKGGETRVFDANGPDGVRFVMQEPLTTLLLDDARVIHETTPILPGDGPAEDGYRDTLVLT YRAGGFQAP >Mature_249_residues MFNIATVQKPADQALRQDGLSLLYPAGLTTSLHLDSPAWRQGWQQLTDSWNRLPPDAHLKDGGHYRKRRHACFVQELPGG ALTQAPHRAHWQPTDYNALHGGFERWFEPVEPAVAEAPAWTDLLASLGKLFAQVRPVPRWYIEAHQFRIDTAGGVGRPTP EGAHRDGVDFVVVLLVARHGVKGGETRVFDANGPDGVRFVMQEPLTTLLLDDARVIHETTPILPGDGPAEDGYRDTLVLT YRAGGFQAP
Specific function: Unknown
COG id: COG4340
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27528; Mature: 27528
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNIATVQKPADQALRQDGLSLLYPAGLTTSLHLDSPAWRQGWQQLTDSWNRLPPDAHLK CCCCCCCCCHHHHHHHHCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCC DGGHYRKRRHACFVQELPGGALTQAPHRAHWQPTDYNALHGGFERWFEPVEPAVAEAPAW CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHCCCCH TDLLASLGKLFAQVRPVPRWYIEAHQFRIDTAGGVGRPTPEGAHRDGVDFVVVLLVARHG HHHHHHHHHHHHHHCCCCHHHEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCC VKGGETRVFDANGPDGVRFVMQEPLTTLLLDDARVIHETTPILPGDGPAEDGYRDTLVLT CCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE YRAGGFQAP EECCCCCCC >Mature Secondary Structure MFNIATVQKPADQALRQDGLSLLYPAGLTTSLHLDSPAWRQGWQQLTDSWNRLPPDAHLK CCCCCCCCCHHHHHHHHCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCC DGGHYRKRRHACFVQELPGGALTQAPHRAHWQPTDYNALHGGFERWFEPVEPAVAEAPAW CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHCCCCH TDLLASLGKLFAQVRPVPRWYIEAHQFRIDTAGGVGRPTPEGAHRDGVDFVVVLLVARHG HHHHHHHHHHHHHHCCCCHHHEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCC VKGGETRVFDANGPDGVRFVMQEPLTTLLLDDARVIHETTPILPGDGPAEDGYRDTLVLT CCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE YRAGGFQAP EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA