Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is coxM [H]

Identifier: 91786482

GI number: 91786482

Start: 578450

End: 579241

Strand: Reverse

Name: coxM [H]

Synonym: Bpro_0576

Alternate gene names: 91786482

Gene position: 579241-578450 (Counterclockwise)

Preceding gene: 91786483

Following gene: 91786481

Centisome position: 11.14

GC content: 66.41

Gene sequence:

>792_bases
ATGTATGCATTCACCCTGGAACGCCCCACCACCCTGGCTGACGCCGCGAAGCTCGCAGCCGCCGGCGCCAAGCCGCTGGC
CGGTGGCCAGACCCTGCTGGCGTCGATGAAGATGCGCCTGTCCAGCCCGGAGCAACTGGCCGACCTGAGCGGCATCAAGG
AACTTGCCGGCATCAAGCGCGACAGCAATGCTTTTGTGATCGGTGCGATGACGCGCCACGCCGATGTGGCCGACAACGCC
GAACTGAAAGCGGCCTTGCCCGCGCTGGCGGACATGGCAGCGCACATCGGTGACCGCCAGGTGCGCGCGATGGGCACGCT
GGGTGGCTCGGTGGCCAACAACGACCCGGCCGCCTGCTACCCCAGCGCGGTGCTGGGGCTGGGCGCGACCATTCACACGA
CGGCGCGCAAGATTGCCGCCGACGATTTCTTCCTCGGCATGTTCGCGACCGCGCTCAACGAAGGCGAGTTGATCACCGCG
ATCAGCTTTCCGATTCCGAAGCGCGCGGCCTACATGAAGTTCAAGCAGCCGGCCTCGCGCTTTGCGCTGGTCGGTGTGTT
CATTGCGCAGTTTGATGCCGGTGTGCGCGTGGCCATCACCGGGGCGGCCAACGGCGTGTTCCGCCATGCCGGCCTGGAAG
CTGCCTTGAGCAAAAGCTTCACGCCCGAAGCAGCCGCCGCCGTGAAGATTGACGCAACAGACCTCAACAGCGACATCCAC
GCCACAGCGGCGTACCGCGCCAACCTGATCAGCGTGCAGGCGCAGCGCGGGGTGGCGAAGGCGCTGGGCTAA

Upstream 100 bases:

>100_bases
CCGCTGGGCGTGACCGACTTCGACATGCCTGCATCGCCCGGCCGTGTCTGGGAAGCCATCCAGGCCGCCAAACACTGAAC
CCTTCCAAGGAGCACCCACC

Downstream 100 bases:

>100_bases
CCGGGCAAGGCCAAGGCGGGGTGGCGAAGGCTGTCATTGCGGGCTTGACCCGCAATCCATGAACCCGGCTTTTGGCTGGA
GAATGCGGATGCATGGATCC

Product: molybdopterin dehydrogenase

Products: NA

Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MYAFTLERPTTLADAAKLAAAGAKPLAGGQTLLASMKMRLSSPEQLADLSGIKELAGIKRDSNAFVIGAMTRHADVADNA
ELKAALPALADMAAHIGDRQVRAMGTLGGSVANNDPAACYPSAVLGLGATIHTTARKIAADDFFLGMFATALNEGELITA
ISFPIPKRAAYMKFKQPASRFALVGVFIAQFDAGVRVAITGAANGVFRHAGLEAALSKSFTPEAAAAVKIDATDLNSDIH
ATAAYRANLISVQAQRGVAKALG

Sequences:

>Translated_263_residues
MYAFTLERPTTLADAAKLAAAGAKPLAGGQTLLASMKMRLSSPEQLADLSGIKELAGIKRDSNAFVIGAMTRHADVADNA
ELKAALPALADMAAHIGDRQVRAMGTLGGSVANNDPAACYPSAVLGLGATIHTTARKIAADDFFLGMFATALNEGELITA
ISFPIPKRAAYMKFKQPASRFALVGVFIAQFDAGVRVAITGAANGVFRHAGLEAALSKSFTPEAAAAVKIDATDLNSDIH
ATAAYRANLISVQAQRGVAKALG
>Mature_263_residues
MYAFTLERPTTLADAAKLAAAGAKPLAGGQTLLASMKMRLSSPEQLADLSGIKELAGIKRDSNAFVIGAMTRHADVADNA
ELKAALPALADMAAHIGDRQVRAMGTLGGSVANNDPAACYPSAVLGLGATIHTTARKIAADDFFLGMFATALNEGELITA
ISFPIPKRAAYMKFKQPASRFALVGVFIAQFDAGVRVAITGAANGVFRHAGLEAALSKSFTPEAAAAVKIDATDLNSDIH
ATAAYRANLISVQAQRGVAKALG

Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.2.99.2 [H]

Molecular weight: Translated: 27139; Mature: 27139

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAFTLERPTTLADAAKLAAAGAKPLAGGQTLLASMKMRLSSPEQLADLSGIKELAGIKR
CEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
DSNAFVIGAMTRHADVADNAELKAALPALADMAAHIGDRQVRAMGTLGGSVANNDPAACY
CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC
PSAVLGLGATIHTTARKIAADDFFLGMFATALNEGELITAISFPIPKRAAYMKFKQPASR
CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCHHH
FALVGVFIAQFDAGVRVAITGAANGVFRHAGLEAALSKSFTPEAAAAVKIDATDLNSDIH
HHHHHHHHHHHCCCEEEEEEECCCCHHHHHCHHHHHHCCCCCCCCEEEEEECCCCCCCHH
ATAAYRANLISVQAQRGVAKALG
HHHHHHHHHEEEHHHHHHHHHCC
>Mature Secondary Structure
MYAFTLERPTTLADAAKLAAAGAKPLAGGQTLLASMKMRLSSPEQLADLSGIKELAGIKR
CEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
DSNAFVIGAMTRHADVADNAELKAALPALADMAAHIGDRQVRAMGTLGGSVANNDPAACY
CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC
PSAVLGLGATIHTTARKIAADDFFLGMFATALNEGELITAISFPIPKRAAYMKFKQPASR
CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCHHH
FALVGVFIAQFDAGVRVAITGAANGVFRHAGLEAALSKSFTPEAAAAVKIDATDLNSDIH
HHHHHHHHHHHCCCEEEEEEECCCCHHHHHCHHHHHHCCCCCCCCEEEEEECCCCCCCHH
ATAAYRANLISVQAQRGVAKALG
HHHHHHHHHEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721710; 1510563; 2818128; 10430865; 12475995 [H]