| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is cutL [H]
Identifier: 91786483
GI number: 91786483
Start: 579264
End: 581639
Strand: Reverse
Name: cutL [H]
Synonym: Bpro_0577
Alternate gene names: 91786483
Gene position: 581639-579264 (Counterclockwise)
Preceding gene: 91786484
Following gene: 91786482
Centisome position: 11.18
GC content: 65.99
Gene sequence:
>2376_bases ATGGGTGCATCCGACTTCATCAACCTGCCGACGATCGGCACGTCCGTTCGCCGCAAGGAAGACTACCGCTTTCTCACCGG TGGCGGCCAATACACCGATGACATCACGCTGGCCAACCAGAGTTACGCGGTGTTTGTGCGCTCGCCGCATGCGCATGCCC GGATCAACAGCATCAGCACCGCGCAGGCCAAGGCCGCGCCGGGCGTTCTGGGCGTGTTTGTCGGCGAGGACGTCGCGGCC GACAAGATCAACGGCCTGCCCTGCGGCTGGCTGATCACCTCCACCTCCGGCACCCCGATGAAGGAGCCGCCGCACCCCAT CCTGGCGCAGGGCAAGGTGCGTTATGTCGGCGACCATGTCGCCATGGTGGTGGCCGAAACGCTGGAGCAGGCCAAAAATG CCGCCGAGCTGGTCGAGGTGGACTACGACGTGCTGAGCGCCGTGGTCAAGGTCACGGATGCCGCGAAAGCCACGGCCCTG CATGACGCCGCACCCGACAACCACTGCTACAAATGGGCGATAGGCGACAAGGCGCAGGTCGATGCGGCTTTTGCCGGGGC GGCGCATGTGACCAAACTTGACCTGACCAACAACCGGCTGGTGCCCAACGCGATGGAGCCGCGCGCCGTGATCGGATCCT ACAGCCGGGCGACGGATGAATACACGCTGTACGTGGCCAACCAGAACCCGCACGTCGAGCGCCTGCTGCTCACCGCGTTT GTGATGGGCCTGCCGGAGCACAAGGTGCGCGTGATTGCGCCCGATGTGGGGGGCGGCTTCGGCTCCAAGATCTACCTGTA TGCCGAAGATGTCTGCCTGACCTGGGCCTCGAAAAAACTCAACCGCAACATCAAGTGGACGGCCGACCGCAGCGAAGCCT TTGTCAGCGACGCCCACGGCCGGGACCATTCCAGCCATGCCGAAATGGCGCTCGACAAGGACGGCAAGTTCCTCGCGCTG CGCGTGCACACCGACGCCAACATGGGCGCCTACCTGTCAACCTTTGCGCCGGCCATCCCGACCATTCTGTATGCCACGCT GCTGGCCGGCCAGTACACCACGCCGCAGATTTATGTCGAGGTCGATGCCTGGTTCACCAACACCGCGCCGGTGGACGCCT ACCGCGGCGCCGGCCGTCCCGAAGCGACCTACCTGCTGGAACGGCTGGTCACGCGCGCCGGCTGGGAGCTGGGCCTGGCG CAGGATGAAATCCGCCGGCGCAACATGGTCACCCAGTTCCCGTACCAGACGCCGGTGGCGCTGCAGTACGACGTGGGCGA CTTCCGCGCCTTGCTGGAGCGCGCCAACGAACTGGCCGACGTGGCCGGTTTTGCCCGGCGCAAAACGGCCACCGAGGCGA AGGGCAAGCTGCGCGGCATGGGCTACTCGAGCTACATCGAAGCCTGCGGCCTGGCGCCCAGCAACATCGCCGGCGCGCTG GGTGCCCGGGCCGGCCTGTTCGAGTGCGGCGAGGTGCGGGTTCACCCCACCGGCAGCGTCACCGTGTTCACCGGCTCGCA CAGCCACGGGCAGGGCCATGAGACCACGTTCTCCCAGGTCGTGGCCGCCCGCCTGGGCATTTCGGTCGAGCAGGTGGACG TGGTGCATGGCGACACCGGGCGAGTGCCTTTCGGCATGGGCACCTATGGGTCCCGCTCCCTGGCGGTCGGCGGCACGGCC ATCATGAAGGCGCTGGACAAGATCGAGGCCAAGGCCAAGAAAATCGCCGCCCACCTGATGGAGGCCAGCGACGCCGACGT CGAGTTCGCCAATGGCGAATTCACCATCAAGGGAACCGACAAGAAAGTGACCTTCGGCCAGGTGGCGCTGACGGCCTACG TGCCGCACAACTACCCGCTCGACAAGCTGGAGCCCGGCCTCAACGAGACGGCGTTTTACGACCCGACCAACTTCACCTTC CCGGCCGGCACCTACATCTGCGAAGTCGAGGTCGACCCCGCCACCGGTGAAGTGAGGGTGGACCGCTTCACCGCGGTGGA CGACTTCGGCAACATCATCAACCCGATGATCGTCGAAGGCCAGGTGCACGGAGGCCTGGTGCAGGGCATTGGCCAGGCGT TGATGGAAAACTGCGTGTACGACGAAGAATCCGGCCAGCTGCTGACCGGCTCGCTAATGGACTACGCGATGCCGCGTGCC GACGACATGCCCAACTTCACGCTGGCCACGCTGTGCACACCGTGCAGCCACAACCCGCTCGGCGCCAAGGGCTGCGGCGA GGCGGGCGCCATCGGGTCGCCGCCGGCGGTGATCAACGCCGTGCTGGATGCGCTCAAGCCGCTGGGCGTGACCGACTTCG ACATGCCTGCATCGCCCGGCCGTGTCTGGGAAGCCATCCAGGCCGCCAAACACTGA
Upstream 100 bases:
>100_bases CAGCACTGCCGGTTCCCGCTACCGGCATGGATGAAACGTCCCGCCAGCGCGAGAGCCAAGGCCAAACCAAGTTAGCCATC TTTCCCAGGGAGTACACGAC
Downstream 100 bases:
>100_bases ACCCTTCCAAGGAGCACCCACCATGTATGCATTCACCCTGGAACGCCCCACCACCCTGGCTGACGCCGCGAAGCTCGCAG CCGCCGGCGCCAAGCCGCTG
Product: xanthine dehydrogenase, molybdenum-binding subunit apoprotein
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 791; Mature: 790
Protein sequence:
>791_residues MGASDFINLPTIGTSVRRKEDYRFLTGGGQYTDDITLANQSYAVFVRSPHAHARINSISTAQAKAAPGVLGVFVGEDVAA DKINGLPCGWLITSTSGTPMKEPPHPILAQGKVRYVGDHVAMVVAETLEQAKNAAELVEVDYDVLSAVVKVTDAAKATAL HDAAPDNHCYKWAIGDKAQVDAAFAGAAHVTKLDLTNNRLVPNAMEPRAVIGSYSRATDEYTLYVANQNPHVERLLLTAF VMGLPEHKVRVIAPDVGGGFGSKIYLYAEDVCLTWASKKLNRNIKWTADRSEAFVSDAHGRDHSSHAEMALDKDGKFLAL RVHTDANMGAYLSTFAPAIPTILYATLLAGQYTTPQIYVEVDAWFTNTAPVDAYRGAGRPEATYLLERLVTRAGWELGLA QDEIRRRNMVTQFPYQTPVALQYDVGDFRALLERANELADVAGFARRKTATEAKGKLRGMGYSSYIEACGLAPSNIAGAL GARAGLFECGEVRVHPTGSVTVFTGSHSHGQGHETTFSQVVAARLGISVEQVDVVHGDTGRVPFGMGTYGSRSLAVGGTA IMKALDKIEAKAKKIAAHLMEASDADVEFANGEFTIKGTDKKVTFGQVALTAYVPHNYPLDKLEPGLNETAFYDPTNFTF PAGTYICEVEVDPATGEVRVDRFTAVDDFGNIINPMIVEGQVHGGLVQGIGQALMENCVYDEESGQLLTGSLMDYAMPRA DDMPNFTLATLCTPCSHNPLGAKGCGEAGAIGSPPAVINAVLDALKPLGVTDFDMPASPGRVWEAIQAAKH
Sequences:
>Translated_791_residues MGASDFINLPTIGTSVRRKEDYRFLTGGGQYTDDITLANQSYAVFVRSPHAHARINSISTAQAKAAPGVLGVFVGEDVAA DKINGLPCGWLITSTSGTPMKEPPHPILAQGKVRYVGDHVAMVVAETLEQAKNAAELVEVDYDVLSAVVKVTDAAKATAL HDAAPDNHCYKWAIGDKAQVDAAFAGAAHVTKLDLTNNRLVPNAMEPRAVIGSYSRATDEYTLYVANQNPHVERLLLTAF VMGLPEHKVRVIAPDVGGGFGSKIYLYAEDVCLTWASKKLNRNIKWTADRSEAFVSDAHGRDHSSHAEMALDKDGKFLAL RVHTDANMGAYLSTFAPAIPTILYATLLAGQYTTPQIYVEVDAWFTNTAPVDAYRGAGRPEATYLLERLVTRAGWELGLA QDEIRRRNMVTQFPYQTPVALQYDVGDFRALLERANELADVAGFARRKTATEAKGKLRGMGYSSYIEACGLAPSNIAGAL GARAGLFECGEVRVHPTGSVTVFTGSHSHGQGHETTFSQVVAARLGISVEQVDVVHGDTGRVPFGMGTYGSRSLAVGGTA IMKALDKIEAKAKKIAAHLMEASDADVEFANGEFTIKGTDKKVTFGQVALTAYVPHNYPLDKLEPGLNETAFYDPTNFTF PAGTYICEVEVDPATGEVRVDRFTAVDDFGNIINPMIVEGQVHGGLVQGIGQALMENCVYDEESGQLLTGSLMDYAMPRA DDMPNFTLATLCTPCSHNPLGAKGCGEAGAIGSPPAVINAVLDALKPLGVTDFDMPASPGRVWEAIQAAKH >Mature_790_residues GASDFINLPTIGTSVRRKEDYRFLTGGGQYTDDITLANQSYAVFVRSPHAHARINSISTAQAKAAPGVLGVFVGEDVAAD KINGLPCGWLITSTSGTPMKEPPHPILAQGKVRYVGDHVAMVVAETLEQAKNAAELVEVDYDVLSAVVKVTDAAKATALH DAAPDNHCYKWAIGDKAQVDAAFAGAAHVTKLDLTNNRLVPNAMEPRAVIGSYSRATDEYTLYVANQNPHVERLLLTAFV MGLPEHKVRVIAPDVGGGFGSKIYLYAEDVCLTWASKKLNRNIKWTADRSEAFVSDAHGRDHSSHAEMALDKDGKFLALR VHTDANMGAYLSTFAPAIPTILYATLLAGQYTTPQIYVEVDAWFTNTAPVDAYRGAGRPEATYLLERLVTRAGWELGLAQ DEIRRRNMVTQFPYQTPVALQYDVGDFRALLERANELADVAGFARRKTATEAKGKLRGMGYSSYIEACGLAPSNIAGALG ARAGLFECGEVRVHPTGSVTVFTGSHSHGQGHETTFSQVVAARLGISVEQVDVVHGDTGRVPFGMGTYGSRSLAVGGTAI MKALDKIEAKAKKIAAHLMEASDADVEFANGEFTIKGTDKKVTFGQVALTAYVPHNYPLDKLEPGLNETAFYDPTNFTFP AGTYICEVEVDPATGEVRVDRFTAVDDFGNIINPMIVEGQVHGGLVQGIGQALMENCVYDEESGQLLTGSLMDYAMPRAD DMPNFTLATLCTPCSHNPLGAKGCGEAGAIGSPPAVINAVLDALKPLGVTDFDMPASPGRVWEAIQAAKH
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=752, Percent_Identity=25.531914893617, Blast_Score=157, Evalue=5e-38, Organism=Homo sapiens, GI91823271, Length=794, Percent_Identity=24.5591939546599, Blast_Score=142, Evalue=1e-33, Organism=Escherichia coli, GI1789230, Length=784, Percent_Identity=27.8061224489796, Blast_Score=224, Evalue=1e-59, Organism=Escherichia coli, GI1789246, Length=809, Percent_Identity=25.7107540173053, Blast_Score=224, Evalue=2e-59, Organism=Escherichia coli, GI1786478, Length=740, Percent_Identity=27.5675675675676, Blast_Score=138, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17540638, Length=814, Percent_Identity=24.9385749385749, Blast_Score=172, Evalue=6e-43, Organism=Caenorhabditis elegans, GI17539860, Length=796, Percent_Identity=25.3768844221106, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI32566215, Length=559, Percent_Identity=25.0447227191413, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI17737937, Length=787, Percent_Identity=25.4129606099111, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI24647199, Length=773, Percent_Identity=23.4152652005175, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24647197, Length=283, Percent_Identity=28.2685512367491, Blast_Score=83, Evalue=8e-16, Organism=Drosophila melanogaster, GI24647195, Length=283, Percent_Identity=28.2685512367491, Blast_Score=83, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 84760; Mature: 84628
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGASDFINLPTIGTSVRRKEDYRFLTGGGQYTDDITLANQSYAVFVRSPHAHARINSIST CCCCCEEECCCCCCCHHCCCCCEEEECCCCCCCCEEECCCCEEEEEECCCCCEEECCCCH AQAKAAPGVLGVFVGEDVAADKINGLPCGWLITSTSGTPMKEPPHPILAQGKVRYVGDHV HHHHCCCCEEEEEECCCCCHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEHHHH AMVVAETLEQAKNAAELVEVDYDVLSAVVKVTDAAKATALHDAAPDNHCYKWAIGDKAQV HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC DAAFAGAAHVTKLDLTNNRLVPNAMEPRAVIGSYSRATDEYTLYVANQNPHVERLLLTAF CHHHCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHH VMGLPEHKVRVIAPDVGGGFGSKIYLYAEDVCLTWASKKLNRNIKWTADRSEAFVSDAHG HHCCCCCCEEEEECCCCCCCCCEEEEEECCEEEEHHHHHHCCCCEEECCCCHHHHHCCCC RDHSSHAEMALDKDGKFLALRVHTDANMGAYLSTFAPAIPTILYATLLAGQYTTPQIYVE CCCCCCCCEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE VDAWFTNTAPVDAYRGAGRPEATYLLERLVTRAGWELGLAQDEIRRRNMVTQFPYQTPVA EEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEECCCCCCCE LQYDVGDFRALLERANELADVAGFARRKTATEAKGKLRGMGYSSYIEACGLAPSNIAGAL EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH GARAGLFECGEVRVHPTGSVTVFTGSHSHGQGHETTFSQVVAARLGISVEQVDVVHGDTG HCCCCCEECCCEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCC RVPFGMGTYGSRSLAVGGTAIMKALDKIEAKAKKIAAHLMEASDADVEFANGEFTIKGTD CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEECC KKVTFGQVALTAYVPHNYPLDKLEPGLNETAFYDPTNFTFPAGTYICEVEVDPATGEVRV CEEEEEEEEEEEECCCCCCHHHCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCEEE DRFTAVDDFGNIINPMIVEGQVHGGLVQGIGQALMENCVYDEESGQLLTGSLMDYAMPRA EEEEEHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHCCCCC DDMPNFTLATLCTPCSHNPLGAKGCGEAGAIGSPPAVINAVLDALKPLGVTDFDMPASPG CCCCCEEHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCH RVWEAIQAAKH HHHHHHHHHCC >Mature Secondary Structure GASDFINLPTIGTSVRRKEDYRFLTGGGQYTDDITLANQSYAVFVRSPHAHARINSIST CCCCEEECCCCCCCHHCCCCCEEEECCCCCCCCEEECCCCEEEEEECCCCCEEECCCCH AQAKAAPGVLGVFVGEDVAADKINGLPCGWLITSTSGTPMKEPPHPILAQGKVRYVGDHV HHHHCCCCEEEEEECCCCCHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEHHHH AMVVAETLEQAKNAAELVEVDYDVLSAVVKVTDAAKATALHDAAPDNHCYKWAIGDKAQV HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC DAAFAGAAHVTKLDLTNNRLVPNAMEPRAVIGSYSRATDEYTLYVANQNPHVERLLLTAF CHHHCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHH VMGLPEHKVRVIAPDVGGGFGSKIYLYAEDVCLTWASKKLNRNIKWTADRSEAFVSDAHG HHCCCCCCEEEEECCCCCCCCCEEEEEECCEEEEHHHHHHCCCCEEECCCCHHHHHCCCC RDHSSHAEMALDKDGKFLALRVHTDANMGAYLSTFAPAIPTILYATLLAGQYTTPQIYVE CCCCCCCCEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE VDAWFTNTAPVDAYRGAGRPEATYLLERLVTRAGWELGLAQDEIRRRNMVTQFPYQTPVA EEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEECCCCCCCE LQYDVGDFRALLERANELADVAGFARRKTATEAKGKLRGMGYSSYIEACGLAPSNIAGAL EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH GARAGLFECGEVRVHPTGSVTVFTGSHSHGQGHETTFSQVVAARLGISVEQVDVVHGDTG HCCCCCEECCCEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCC RVPFGMGTYGSRSLAVGGTAIMKALDKIEAKAKKIAAHLMEASDADVEFANGEFTIKGTD CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEECC KKVTFGQVALTAYVPHNYPLDKLEPGLNETAFYDPTNFTFPAGTYICEVEVDPATGEVRV CEEEEEEEEEEEECCCCCCHHHCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCEEE DRFTAVDDFGNIINPMIVEGQVHGGLVQGIGQALMENCVYDEESGQLLTGSLMDYAMPRA EEEEEHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHCCCCC DDMPNFTLATLCTPCSHNPLGAKGCGEAGAIGSPPAVINAVLDALKPLGVTDFDMPASPG CCCCCEEHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCH RVWEAIQAAKH HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]