| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91786481
Identifier: 91786481
GI number: 91786481
Start: 577237
End: 578223
Strand: Reverse
Name: 91786481
Synonym: Bpro_0575
Alternate gene names: NA
Gene position: 578223-577237 (Counterclockwise)
Preceding gene: 91786482
Following gene: 91786480
Centisome position: 11.12
GC content: 68.29
Gene sequence:
>987_bases ATGACACCTTTCCCAAGCATTGATGCGCTGATGCAGGCGCTGCAGGGCGCCGGCTACTTTGCCGACCGCCGGCTGGCGAC GGCGGTCTTTCTGGCCCTCAGGCTGCAGCGTCCGCTGCTGCTGGAAGGCGAGCCCGGCGTGGGCAAGACCGAGCTGGCCA AGGCGCTGGCCGTGGCGCTGCAGCGGCAACTGATACGCCTGCAGTGCTACGACGGGCTGGAGCAGCGCGAAGCCCTGTAC GAATGGAACTATGCGGCCCAGTTGCTGCACATGCGGGCCGTGGAATTGAGAGCCCCCACGCTCGGCACTGGCGTGTCCTC GCTGCCCCCCGAGGGGGCGTCCGCCGCCTTGGGGCGGCCCGGCGGCGGCGGGCACGACAACGCCGCCGACGTGGAACGCG AGGTCTACCAGGACCGCTACCTGATCCGGCGCCCGCTGCTGCAGGCGCTGCAAACGCCCCCGCCGGGCGCGGTGCTGCTG ATCGACGAAGTGGACCGGGCCGATGAACCCTTCGAAGCCTTTTTGCTGGAATACCTGGGCGAGTACCAGGTCAGCATTCC GGAGATCGGCACGGTGCGCGCCGAGGTGACGCCCGTCACCATCCTCACCAGCAACCGCACGCGCGAACTCAACGACGCCG TCAAGCGGCGCTGCCTGTACCACTGGCTCGACTACCCGGACCGCGAACGCGAACTCGCGATTGTGCGGGCCCAGGTTCCC GAGGCCGGTGAGCAGCTGTCTGCGCAGGTGGCCGGCTTTGTCGACCGGCTGCGCCGCTCGCCGTTCGGCAATGCCTTCCA GCGGGCGCCGGGCATTGCCGAGAGCGTCGAATGGGCCAGGGCGCTGGTCGCGCTCGACACACTGGTGGTTGACCCCGAAG TGGTGGCCGATACGGCAGGCATTCTGTTCAAGCAGCGTGAAGATGTAGCGGCGCTGACGCATGGGATGGCGGTTGAGTTG CTGAAGCCCGAGGAGGTGGCGGGATGA
Upstream 100 bases:
>100_bases GGCAAGGGCCTCACTGAACCAAATTGCTCTCAGCCCTTGATTTACGGGCGCAAGTAGCTATTTAATTGATAGCCCATGAA AAACCGGCAGGCCGATTTCT
Downstream 100 bases:
>100_bases TGCGCACTCGCCCTCACCCCAACCCTCTCCCAGGGGGAGAGGGAGCAAGTCCGCTTTTCATCCTCTATGCCGGAGTACCC GCAGGAGAGGGAGTAAGTCC
Product: ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; AAA Family ATPase; MoxR-Like ATPase; AAA_5 ATPase; AAA ATPase; ATPase AAA Family Protein; ATPase Associated With Various Cellular Activities; ATPase Central Domain-Containing Protein; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; MoxR Family ATPase; ATP-Dependent Protease; ATPase Protein; Aaa ATPase; ATPase-Like Protein; Chaperone ClpB; Oligopeptide ABC Transporter; Membrane Oxidoreductase; AAA ATPase Central RegionATPase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; Carbon Monoxide Dehydrogenase Accesory Protein; ClpA/ClpB Family Protein; ATPase Aaa Family; AAA ATPase Family Protein; MoxR-Like ATPase CoxD
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MTPFPSIDALMQALQGAGYFADRRLATAVFLALRLQRPLLLEGEPGVGKTELAKALAVALQRQLIRLQCYDGLEQREALY EWNYAAQLLHMRAVELRAPTLGTGVSSLPPEGASAALGRPGGGGHDNAADVEREVYQDRYLIRRPLLQALQTPPPGAVLL IDEVDRADEPFEAFLLEYLGEYQVSIPEIGTVRAEVTPVTILTSNRTRELNDAVKRRCLYHWLDYPDRERELAIVRAQVP EAGEQLSAQVAGFVDRLRRSPFGNAFQRAPGIAESVEWARALVALDTLVVDPEVVADTAGILFKQREDVAALTHGMAVEL LKPEEVAG
Sequences:
>Translated_328_residues MTPFPSIDALMQALQGAGYFADRRLATAVFLALRLQRPLLLEGEPGVGKTELAKALAVALQRQLIRLQCYDGLEQREALY EWNYAAQLLHMRAVELRAPTLGTGVSSLPPEGASAALGRPGGGGHDNAADVEREVYQDRYLIRRPLLQALQTPPPGAVLL IDEVDRADEPFEAFLLEYLGEYQVSIPEIGTVRAEVTPVTILTSNRTRELNDAVKRRCLYHWLDYPDRERELAIVRAQVP EAGEQLSAQVAGFVDRLRRSPFGNAFQRAPGIAESVEWARALVALDTLVVDPEVVADTAGILFKQREDVAALTHGMAVEL LKPEEVAG >Mature_327_residues TPFPSIDALMQALQGAGYFADRRLATAVFLALRLQRPLLLEGEPGVGKTELAKALAVALQRQLIRLQCYDGLEQREALYE WNYAAQLLHMRAVELRAPTLGTGVSSLPPEGASAALGRPGGGGHDNAADVEREVYQDRYLIRRPLLQALQTPPPGAVLLI DEVDRADEPFEAFLLEYLGEYQVSIPEIGTVRAEVTPVTILTSNRTRELNDAVKRRCLYHWLDYPDRERELAIVRAQVPE AGEQLSAQVAGFVDRLRRSPFGNAFQRAPGIAESVEWARALVALDTLVVDPEVVADTAGILFKQREDVAALTHGMAVELL KPEEVAG
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36069; Mature: 35937
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPFPSIDALMQALQGAGYFADRRLATAVFLALRLQRPLLLEGEPGVGKTELAKALAVAL CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHH QRQLIRLQCYDGLEQREALYEWNYAAQLLHMRAVELRAPTLGTGVSSLPPEGASAALGRP HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GGGGHDNAADVEREVYQDRYLIRRPLLQALQTPPPGAVLLIDEVDRADEPFEAFLLEYLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHC EYQVSIPEIGTVRAEVTPVTILTSNRTRELNDAVKRRCLYHWLDYPDRERELAIVRAQVP CCEECCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC EAGEQLSAQVAGFVDRLRRSPFGNAFQRAPGIAESVEWARALVALDTLVVDPEVVADTAG CHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH ILFKQREDVAALTHGMAVELLKPEEVAG HHHHHHHHHHHHHHCCCEEEECCHHCCC >Mature Secondary Structure TPFPSIDALMQALQGAGYFADRRLATAVFLALRLQRPLLLEGEPGVGKTELAKALAVAL CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHH QRQLIRLQCYDGLEQREALYEWNYAAQLLHMRAVELRAPTLGTGVSSLPPEGASAALGRP HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GGGGHDNAADVEREVYQDRYLIRRPLLQALQTPPPGAVLLIDEVDRADEPFEAFLLEYLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHC EYQVSIPEIGTVRAEVTPVTILTSNRTRELNDAVKRRCLYHWLDYPDRERELAIVRAQVP CCEECCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC EAGEQLSAQVAGFVDRLRRSPFGNAFQRAPGIAESVEWARALVALDTLVVDPEVVADTAG CHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH ILFKQREDVAALTHGMAVELLKPEEVAG HHHHHHHHHHHHHHCCCEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA