| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786480
Identifier: 91786480
GI number: 91786480
Start: 575881
End: 577065
Strand: Reverse
Name: 91786480
Synonym: Bpro_0574
Alternate gene names: NA
Gene position: 577065-575881 (Counterclockwise)
Preceding gene: 91786481
Following gene: 91786479
Centisome position: 11.1
GC content: 68.19
Gene sequence:
>1185_bases GTGCTGTTAGGCGACGCCAGAGCCGGCAAGCTGGCCGACAACATCACCGGTTTTGGCCGGGCGTTGCGCCGCGCCGGCGT GAAAATTGACAGCCAGCGCATCGCGCTGGCCAAGGAGGCCGCGCTGGCGGTCGGCGTTGCCGACAAGGAAGACCTCAGCG CCGCCTTTGAAGCGGTCATGGTCAGCCGCGAGCAGGACCGTCTGGTCTTTCGCGAACTGTTCGATGTGTACTTCCAGGAC CCGAAAGTCGCCAACAAGCTGCTGGCGCAGTTGCTGCCCAGCGCCGAAGGCAAGGCCGAACCGAGCAAGCGCCGGCCCCG CGTGCGCGAGGCGCTGTCGCCGCAAAAGACCTTTGGCCAGCAGGCCCAGCCCCGCGCCGAAGACCAGAAGGTGGAGTTCG ATGCGGCCATGACGGCCAGCGACATTGAACGCCTGCAGCATGCCGACTTCAACGCGCTGTCGGCCACCGAGTACCGCCTG GTCGAGCGGCTGGCGCGCGACATCAAACTGCCCTTGCCCATGTTTGCCTCGCGCCGCAGCCGCCCCGCCACCTCGGGCGC GCGCATTCACTGGCCGGGCGTGATGCACCGGGCCGCGCAAACCGGCGGCGAGCTGATGCAACTGCCGCGGCGGCAGCGGC GCGAGCAGGCCCTGCCGCTGCTGGTGCTGGTCGATGTGTCGGGCTCAATGGAGCGCTATGCGCGTTTGCTGCTGGCCTTT TTGCACGCGGCCACGCGCCGTCATCCGCACCGCGATGTGTTTGCCTTCGGCATGCACCTGACCGATTTGACACCGGCATT TCGCCAGTCCGACACCGACGAGATGCTGGCGCATGCCAGTCTGGCGATTGAAGACTTTGCCGGCGGCACGCAGCTGGGCG CGTCGCTGGCCAGCCTGCGCGAGCACCATGCGCGCCGCCTGGTAGGCCGGCGCACCATTGTGCTGGTCATCACCGACGGG CTGGACACCGGCGAGCCGGCCGATCTGGCGAAAGAGCTCGCCTGGCTGCGCCGGCGCAGCCGCCGCCTGCTCTGGCTCAA CCCCTTGCTGCGCTTTGACGGCTACGCGCCGCTGGCACGCGGCGCGGCCGTGCTGCATGCCCACGCGCATGGCATGCTGG CCGTGCACAATTTAGCCAAGCTCGAAGAGCTGGCGGCCAGCCTGGCCGCCCTGATGAAAACCTGA
Upstream 100 bases:
>100_bases GGAGTACCCGCAGGAGAGGGAGTAAGTCCGCACGTCCCTCTCTCTTTCACCGGGTTCACTCCCTCTCCCTCCGGGAGAGG GCTGGGGTGAGGGCTCCCCC
Downstream 100 bases:
>100_bases AAAAAAACTGAAAACTTGAAAGAATCTCCCCATGGACATGCAAGGAAGCCGTCAACTGGCCGTGACCCAGCAACAAGCGT GGGATGCGCTGAACGACCCG
Product: VWA containing CoxE-like protein
Products: NA
Alternate protein names: VWA Containing CoxE-Like; VWA Containing CoxE-Like Protein; VWA Domain Containing CoxE-Like Protein; Carbon Monoxide Dehydrogenase E Protein; VWA Domain CoxE-Like Family Protein; Carbon Monoxide Dehydrogenase CoxE Subunit; Carbon Monoxide Dehydrogenase CoxE Accessory Protein; Carbon Monoxide Dehydrogenase Accessory Protein; CoxE Protein; Von Willebrand Factor Type A Domain-Containing Protein; VWA Domain-Containing CoxE-Like Family Protein
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MLLGDARAGKLADNITGFGRALRRAGVKIDSQRIALAKEAALAVGVADKEDLSAAFEAVMVSREQDRLVFRELFDVYFQD PKVANKLLAQLLPSAEGKAEPSKRRPRVREALSPQKTFGQQAQPRAEDQKVEFDAAMTASDIERLQHADFNALSATEYRL VERLARDIKLPLPMFASRRSRPATSGARIHWPGVMHRAAQTGGELMQLPRRQRREQALPLLVLVDVSGSMERYARLLLAF LHAATRRHPHRDVFAFGMHLTDLTPAFRQSDTDEMLAHASLAIEDFAGGTQLGASLASLREHHARRLVGRRTIVLVITDG LDTGEPADLAKELAWLRRRSRRLLWLNPLLRFDGYAPLARGAAVLHAHAHGMLAVHNLAKLEELAASLAALMKT
Sequences:
>Translated_394_residues MLLGDARAGKLADNITGFGRALRRAGVKIDSQRIALAKEAALAVGVADKEDLSAAFEAVMVSREQDRLVFRELFDVYFQD PKVANKLLAQLLPSAEGKAEPSKRRPRVREALSPQKTFGQQAQPRAEDQKVEFDAAMTASDIERLQHADFNALSATEYRL VERLARDIKLPLPMFASRRSRPATSGARIHWPGVMHRAAQTGGELMQLPRRQRREQALPLLVLVDVSGSMERYARLLLAF LHAATRRHPHRDVFAFGMHLTDLTPAFRQSDTDEMLAHASLAIEDFAGGTQLGASLASLREHHARRLVGRRTIVLVITDG LDTGEPADLAKELAWLRRRSRRLLWLNPLLRFDGYAPLARGAAVLHAHAHGMLAVHNLAKLEELAASLAALMKT >Mature_394_residues MLLGDARAGKLADNITGFGRALRRAGVKIDSQRIALAKEAALAVGVADKEDLSAAFEAVMVSREQDRLVFRELFDVYFQD PKVANKLLAQLLPSAEGKAEPSKRRPRVREALSPQKTFGQQAQPRAEDQKVEFDAAMTASDIERLQHADFNALSATEYRL VERLARDIKLPLPMFASRRSRPATSGARIHWPGVMHRAAQTGGELMQLPRRQRREQALPLLVLVDVSGSMERYARLLLAF LHAATRRHPHRDVFAFGMHLTDLTPAFRQSDTDEMLAHASLAIEDFAGGTQLGASLASLREHHARRLVGRRTIVLVITDG LDTGEPADLAKELAWLRRRSRRLLWLNPLLRFDGYAPLARGAAVLHAHAHGMLAVHNLAKLEELAASLAALMKT
Specific function: Unknown
COG id: COG3552
COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43683; Mature: 43683
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLGDARAGKLADNITGFGRALRRAGVKIDSQRIALAKEAALAVGVADKEDLSAAFEAVM CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VSREQDRLVFRELFDVYFQDPKVANKLLAQLLPSAEGKAEPSKRRPRVREALSPQKTFGQ HCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHCCCHHHHCC QAQPRAEDQKVEFDAAMTASDIERLQHADFNALSATEYRLVERLARDIKLPLPMFASRRS CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCC RPATSGARIHWPGVMHRAAQTGGELMQLPRRQRREQALPLLVLVDVSGSMERYARLLLAF CCCCCCCEEECHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHH LHAATRRHPHRDVFAFGMHLTDLTPAFRQSDTDEMLAHASLAIEDFAGGTQLGASLASLR HHHHHCCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EHHARRLVGRRTIVLVITDGLDTGEPADLAKELAWLRRRSRRLLWLNPLLRFDGYAPLAR HHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECHHHHHCCCCCHHH GAAVLHAHAHGMLAVHNLAKLEELAASLAALMKT HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLLGDARAGKLADNITGFGRALRRAGVKIDSQRIALAKEAALAVGVADKEDLSAAFEAVM CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VSREQDRLVFRELFDVYFQDPKVANKLLAQLLPSAEGKAEPSKRRPRVREALSPQKTFGQ HCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHCCCHHHHCC QAQPRAEDQKVEFDAAMTASDIERLQHADFNALSATEYRLVERLARDIKLPLPMFASRRS CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCC RPATSGARIHWPGVMHRAAQTGGELMQLPRRQRREQALPLLVLVDVSGSMERYARLLLAF CCCCCCCEEECHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHH LHAATRRHPHRDVFAFGMHLTDLTPAFRQSDTDEMLAHASLAIEDFAGGTQLGASLASLR HHHHHCCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EHHARRLVGRRTIVLVITDGLDTGEPADLAKELAWLRRRSRRLLWLNPLLRFDGYAPLAR HHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECHHHHHCCCCCHHH GAAVLHAHAHGMLAVHNLAKLEELAASLAALMKT HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA