Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is livH [H]

Identifier: 91786471

GI number: 91786471

Start: 567658

End: 568572

Strand: Direct

Name: livH [H]

Synonym: Bpro_0565

Alternate gene names: 91786471

Gene position: 567658-568572 (Clockwise)

Preceding gene: 91786470

Following gene: 91786472

Centisome position: 10.92

GC content: 62.95

Gene sequence:

>915_bases
ATGACACTTTCTGAAATGCTCAACATTGGCCTGATGCAGGGCTTTGCCGGTTTGAGCCTGTTTTCCGTGCTGTTGCTGAT
GGGTCTGGGACTGGCCATCATCTTTGGGCAGATGGGTGTCATCAACATGGCGCATGGCGAGTTCATGACCATAGGCGCTT
ACACCATCTACCTGTTTTCGCACCTGGCCGAGGCCTACGCGCCCAGGCTCGTGCAGTCCTACTTCCTGTTCGCCATCGTC
GCGGCCTTCCTGCTGGCCTTCGCCGTCGGCTGGCTGGCCGAATGGGCCTTCATCCGGCATCTCTATAAACGCCCGCTCGA
CACCCTGCTCGCCACCTGGGGCCTGTCGCTGGGCATGCAGCAGATCTTTCGCTCGTCGTTCGGCGCCAAGGAAGTCAGCC
CCACGCTGCCCGACTGGCTGATGGGCTCCTGGGCCCCGGCCCCGGGCCTGGACATTCCCATCAACGGCATGTTCGTGATG
GCGCTCACCCTGGTGGTGACCTGTGGCGTGCTGCTGGCGCTTTACAGGTCGCGCTGGGGCCTGCGGGTGCGTGCCACGGT
GGCCAACCGCGTGATGGCCAATGCCACGGGCATCAACACCCGCAAGACGGACCGCCTGACCTTTGCGATTGGCTGCGGCA
TTGCCGGTGTGGCCGGCGCGGCCTTCACCACCATCGGGTCAACCGGCCCTACCAGCGGTTCGCTGTACATCGTGGACGCG
TTCCTGGTGGTCACCTTTGGTGGCGCTGCCAGCCTGCTCGGAACCGTGGTCTCCGCCTTTGGCATCGCACAAACCCAGTC
CATCGCCGAGTTTTTCATGACCGGCTCCATGGCCAAGGTACTGACCCTGATGACCATCGTGACCATTCTGATGCTGCGCC
CCCAAGGCTTGTTTGCGGCCAAGGTGCGGCGCTGA

Upstream 100 bases:

>100_bases
TTCGTTCCCGCCATCCGCGGGTGCGGGCCGGCAGGGGTATTCAAGAGCGCGCACTGTCACTGCGCCACGCCACGCCACGC
CAGCCGAATTGGAGTTCACC

Downstream 100 bases:

>100_bases
TGGCGTCCCAGCAACTGATATTCAACCGGAGTTTCCTATGAACAGCCTCAAGCAGTGGGTGGAACGAAACAGGATGGGCA
GCGTGCTGTTGCTGGCGGTG

Product: inner-membrane translocator

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: LIV-I protein H [H]

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTLSEMLNIGLMQGFAGLSLFSVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIYLFSHLAEAYAPRLVQSYFLFAIV
AAFLLAFAVGWLAEWAFIRHLYKRPLDTLLATWGLSLGMQQIFRSSFGAKEVSPTLPDWLMGSWAPAPGLDIPINGMFVM
ALTLVVTCGVLLALYRSRWGLRVRATVANRVMANATGINTRKTDRLTFAIGCGIAGVAGAAFTTIGSTGPTSGSLYIVDA
FLVVTFGGAASLLGTVVSAFGIAQTQSIAEFFMTGSMAKVLTLMTIVTILMLRPQGLFAAKVRR

Sequences:

>Translated_304_residues
MTLSEMLNIGLMQGFAGLSLFSVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIYLFSHLAEAYAPRLVQSYFLFAIV
AAFLLAFAVGWLAEWAFIRHLYKRPLDTLLATWGLSLGMQQIFRSSFGAKEVSPTLPDWLMGSWAPAPGLDIPINGMFVM
ALTLVVTCGVLLALYRSRWGLRVRATVANRVMANATGINTRKTDRLTFAIGCGIAGVAGAAFTTIGSTGPTSGSLYIVDA
FLVVTFGGAASLLGTVVSAFGIAQTQSIAEFFMTGSMAKVLTLMTIVTILMLRPQGLFAAKVRR
>Mature_303_residues
TLSEMLNIGLMQGFAGLSLFSVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIYLFSHLAEAYAPRLVQSYFLFAIVA
AFLLAFAVGWLAEWAFIRHLYKRPLDTLLATWGLSLGMQQIFRSSFGAKEVSPTLPDWLMGSWAPAPGLDIPINGMFVMA
LTLVVTCGVLLALYRSRWGLRVRATVANRVMANATGINTRKTDRLTFAIGCGIAGVAGAAFTTIGSTGPTSGSLYIVDAF
LVVTFGGAASLLGTVVSAFGIAQTQSIAEFFMTGSMAKVLTLMTIVTILMLRPQGLFAAKVRR

Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG0559

COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789866, Length=303, Percent_Identity=27.0627062706271, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32564; Mature: 32433

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSEMLNIGLMQGFAGLSLFSVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIYLFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEHHHHHHHHHH
HLAEAYAPRLVQSYFLFAIVAAFLLAFAVGWLAEWAFIRHLYKRPLDTLLATWGLSLGMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIFRSSFGAKEVSPTLPDWLMGSWAPAPGLDIPINGMFVMALTLVVTCGVLLALYRSRWG
HHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
LRVRATVANRVMANATGINTRKTDRLTFAIGCGIAGVAGAAFTTIGSTGPTSGSLYIVDA
CEEHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
FLVVTFGGAASLLGTVVSAFGIAQTQSIAEFFMTGSMAKVLTLMTIVTILMLRPQGLFAA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH
KVRR
HCCC
>Mature Secondary Structure 
TLSEMLNIGLMQGFAGLSLFSVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYTIYLFS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEHHHHHHHHHH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HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]