| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786456
Identifier: 91786456
GI number: 91786456
Start: 548947
End: 549672
Strand: Reverse
Name: 91786456
Synonym: Bpro_0550
Alternate gene names: NA
Gene position: 549672-548947 (Counterclockwise)
Preceding gene: 91786467
Following gene: 91786455
Centisome position: 10.57
GC content: 65.29
Gene sequence:
>726_bases ATGACCCAGCCAGTGCGCCTCGGCGTATTGACCCCCTCTTCCAATACCGCCCTGGAGCCGCTGACCAGCGCCATTGCGGT TGAAATTCCAGGTGTTAGCGCACACTTCTCACGCTTCAGGGTGACCGAAATCTCACTGGACGCACAGGCGCTGGGCCAGT TTGACGACAGCAAAATCCTGGCGGCGGCCGAGCTGCTGGCCGACGCAAAGGTCGATGTGATTGGCTGGAGCGGCACATCC TCGGGCTGGTTGGGCTTCGATGCCGACCACCGCCTGTGTGAGCGCATCCGTGAGCGCACGGGCATCCCCGCCACCACGGC TGTGCTGGCGCTCAATGAACTGCTGGCCTTGCAGGGCGTGCGCAAGCTGGCGCTGGTGACGCCCTACACCGCGGATGTGC AGCAGCGCATCATGGCCAATTACCGCGCGCTCGGCATCGAAGTGGTGGCGGAGCGCCATCTGGGGATCCGCGTCAACCAT GACTTCGCCGGGGTCGAGCCGTCGAGGCTGCTGGCGCTGATGCGCGAGGTTGCGGCGGAGGGCCCGCAGGCCATCACCAC CTTCTGCACCAACCTGCGCGCCGCACCGATGGCGCAGCAGGTAGAAGAAGAACTGGGCATCCCGCTGCTGGACACCGTGA GCACCACCGTCTGGGGCATGCTGCGCGCTGCCGGCGTTCCATCAGCCAACATCACCGGGTGGGGGAGGCTTTTCCAATGC TCGTGA
Upstream 100 bases:
>100_bases AACACTAATGTCGACAGTATTGCGATAAAGTTCATAATCATTCGCAGTGGACGCGCCAATGCCCTATCCTTTGCCAGCAA CCCTCTAACCGGAGACAGCC
Downstream 100 bases:
>100_bases CACCTTCGGGTGAAGATGCACTCGATAGAATGCAGTCACCCTCCTCCACCAATCAGACCGACATGACCAGCACGCGCCAG TCCACGAGCCGCCTCGACCG
Product: Asp/Glu racemase
Products: NA
Alternate protein names: Asp/Glu Racemase; Maleate Cis-Trans Isomerase; Arylmalonate Decarboxylase; Decarboxylase; Asp/Glu/Hydantoin Racemase Family Protein; Maleate Cis-Trans Isomerase Protein; Ectoine Utilization Protein EutA; Asp/Glu/Hydantoin Racemase Family; Asp/Glu/Hydantoin Racemase Superfamily Protein; Arylmalonate Decarboxylase Protein; Maleate Isomerase; Racemase/Decarboxylase; Arylmalonate Decarboxylase / Malonate Isomerase; Cis-Trans Isomerase
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTQPVRLGVLTPSSNTALEPLTSAIAVEIPGVSAHFSRFRVTEISLDAQALGQFDDSKILAAAELLADAKVDVIGWSGTS SGWLGFDADHRLCERIRERTGIPATTAVLALNELLALQGVRKLALVTPYTADVQQRIMANYRALGIEVVAERHLGIRVNH DFAGVEPSRLLALMREVAAEGPQAITTFCTNLRAAPMAQQVEEELGIPLLDTVSTTVWGMLRAAGVPSANITGWGRLFQC S
Sequences:
>Translated_241_residues MTQPVRLGVLTPSSNTALEPLTSAIAVEIPGVSAHFSRFRVTEISLDAQALGQFDDSKILAAAELLADAKVDVIGWSGTS SGWLGFDADHRLCERIRERTGIPATTAVLALNELLALQGVRKLALVTPYTADVQQRIMANYRALGIEVVAERHLGIRVNH DFAGVEPSRLLALMREVAAEGPQAITTFCTNLRAAPMAQQVEEELGIPLLDTVSTTVWGMLRAAGVPSANITGWGRLFQC S >Mature_240_residues TQPVRLGVLTPSSNTALEPLTSAIAVEIPGVSAHFSRFRVTEISLDAQALGQFDDSKILAAAELLADAKVDVIGWSGTSS GWLGFDADHRLCERIRERTGIPATTAVLALNELLALQGVRKLALVTPYTADVQQRIMANYRALGIEVVAERHLGIRVNHD FAGVEPSRLLALMREVAAEGPQAITTFCTNLRAAPMAQQVEEELGIPLLDTVSTTVWGMLRAAGVPSANITGWGRLFQCS
Specific function: Unknown
COG id: COG3473
COG function: function code Q; Maleate cis-trans isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25871; Mature: 25740
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPVRLGVLTPSSNTALEPLTSAIAVEIPGVSAHFSRFRVTEISLDAQALGQFDDSKIL CCCCEEEEEECCCCCCHHHHHHHHHEEECCCCHHHHHHEEEEEEECCHHHHCCCCCCHHH AAAELLADAKVDVIGWSGTSSGWLGFDADHRLCERIRERTGIPATTAVLALNELLALQGV HHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RKLALVTPYTADVQQRIMANYRALGIEVVAERHLGIRVNHDFAGVEPSRLLALMREVAAE HHHHEECCCHHHHHHHHHHHHHHHHHHHEECCCCCEEECCCCCCCCHHHHHHHHHHHHCC GPQAITTFCTNLRAAPMAQQVEEELGIPLLDTVSTTVWGMLRAAGVPSANITGWGRLFQC CCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC S C >Mature Secondary Structure TQPVRLGVLTPSSNTALEPLTSAIAVEIPGVSAHFSRFRVTEISLDAQALGQFDDSKIL CCCEEEEEECCCCCCHHHHHHHHHEEECCCCHHHHHHEEEEEEECCHHHHCCCCCCHHH AAAELLADAKVDVIGWSGTSSGWLGFDADHRLCERIRERTGIPATTAVLALNELLALQGV HHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RKLALVTPYTADVQQRIMANYRALGIEVVAERHLGIRVNHDFAGVEPSRLLALMREVAAE HHHHEECCCHHHHHHHHHHHHHHHHHHHEECCCCCEEECCCCCCCCHHHHHHHHHHHHCC GPQAITTFCTNLRAAPMAQQVEEELGIPLLDTVSTTVWGMLRAAGVPSANITGWGRLFQC CCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA