| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786438
Identifier: 91786438
GI number: 91786438
Start: 529417
End: 530106
Strand: Reverse
Name: 91786438
Synonym: Bpro_0530
Alternate gene names: NA
Gene position: 530106-529417 (Counterclockwise)
Preceding gene: 91786439
Following gene: 91786437
Centisome position: 10.19
GC content: 55.65
Gene sequence:
>690_bases ATGCATGCCATCAAAGCCGTTGTTTTTGACCTGTACGGTACCTTGTACGACGTTTACTCTGTCCGCACCTCCTGCGAGCG CATCTTCCCCGGCCAGGGCGAGATGGTCAGCAAGATGTGGCGCCAAAAGCAACTTGAATACACATGGATGAGAACGCTGA TGGGCCAGTACCAAGACTTCGAGAGCGCCACCCTCGATGCGTTGCGCTACACCTGTGGCAGTCTAGGTCTGGCGCTCGAT GCAGACGGTGAAGCACACCTGTGCTCGGAGTACCTGAGTCTGACCCCTTTCGCGGATGTTCCACAGGCGCTTCAGCAGTT GCGGGCCGCAGGGCTGAAAACCGCCATTTTGTCCAACGGTTCGCGCCATTCCATCCGCCAGGTGGTGGGCAATTCGGGGT TGACCAACTCCTTCGATCACTTGATCAGCGTTGACGAAGTGCGGCTGTTCAAACCGCACCAGAAAGTTTATGAACTTGCG ATGGATACCCTGCACTTGGGTGAATCAGAAATTCTGTTCGTCTCATGTAACTCATGGGATGCGACGGGCGCCAAGTATTT TGGCTACCCGGTATGCTGGATCAATCGCAGCAATGGCGTGTTTGATCAACTGGGTGTCGTGCCCGACATCGTGGTCAGCG ATGTGGGCGTGCTTGCCTCGCGTTTTTCGCCGGTAGACGAGGCTGCATAA
Upstream 100 bases:
>100_bases CGGCAGGAATGCCAAGCTTGAAGCCCACTTTGACCAGGTACTGTTCAAGGCCCAGACCGCCATAGCCATCGATTGATTTT TAAAAGTTTTGGAGAACAGT
Downstream 100 bases:
>100_bases AATGAAATAACTAGTGCGCGGGGAGTTGCCTCAGTCAGCGCCATGATCAGCGGCTAGCATTCGACGTTGTGCTTGGGATT GGCATAAAGAAAGGCAAGAC
Product: haloacid dehalogenase
Products: NA
Alternate protein names: Cryptic L-isomer-specific dehalogenase; DhlS5I; Halocarboxylic acid halidohydrolase; L-2-haloacid dehalogenase; L-DEX [H]
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MHAIKAVVFDLYGTLYDVYSVRTSCERIFPGQGEMVSKMWRQKQLEYTWMRTLMGQYQDFESATLDALRYTCGSLGLALD ADGEAHLCSEYLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELA MDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFSPVDEAA
Sequences:
>Translated_229_residues MHAIKAVVFDLYGTLYDVYSVRTSCERIFPGQGEMVSKMWRQKQLEYTWMRTLMGQYQDFESATLDALRYTCGSLGLALD ADGEAHLCSEYLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELA MDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFSPVDEAA >Mature_229_residues MHAIKAVVFDLYGTLYDVYSVRTSCERIFPGQGEMVSKMWRQKQLEYTWMRTLMGQYQDFESATLDALRYTCGSLGLALD ADGEAHLCSEYLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELA MDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFSPVDEAA
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. S-2- haloalkanoic acid dehalogenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006388 - InterPro: IPR006328 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.8.1.2 [H]
Molecular weight: Translated: 25447; Mature: 25447
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAIKAVVFDLYGTLYDVYSVRTSCERIFPGQGEMVSKMWRQKQLEYTWMRTLMGQYQDF CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ESATLDALRYTCGSLGLALDADGEAHLCSEYLSLTPFADVPQALQQLRAAGLKTAILSNG HHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC SRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEILFVSCNSWD CHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC ATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFSPVDEAA CCCCHHCCCEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MHAIKAVVFDLYGTLYDVYSVRTSCERIFPGQGEMVSKMWRQKQLEYTWMRTLMGQYQDF CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ESATLDALRYTCGSLGLALDADGEAHLCSEYLSLTPFADVPQALQQLRAAGLKTAILSNG HHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC SRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEILFVSCNSWD CHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC ATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFSPVDEAA CCCCHHCCCEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA